RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, human

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-216	ENST00000509784	TMEM192	Q8IY95	271 aa		4.64	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	CYB5D2	Q8WUJ1	264 aa		4.64	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	UTP4	Q969X6	686 aa	Known RBP	4.64	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	FAM46A	Q96IP4	442 aa	Known RBP	4.64	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	SLC6A18	Q96N87	628 aa		4.64	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	YIPF2	Q9BWQ6	316 aa		4.64	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	SEMA6C	Q9H3T2	930 aa		4.64	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	TBX22	Q9Y458	520 aa		4.64	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	LRIG2	O94898	1065 aa		4.63	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	UBOX5	O94941	541 aa		4.63	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	TP53	P04637	393 aa	Predicted RBP	4.63	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	BMP3	P12645	472 aa		4.63	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	CAP2	P40123	477 aa		4.63	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	CCNF	P41002	786 aa		4.63	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	SLC7A5	Q01650	507 aa		4.63	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	ADGRE1	Q14246	886 aa		4.63	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	NCAPH	Q15003	741 aa		4.63	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	TDRD10	Q5VZ19	366 aa	Known RBP	4.63	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	MRM1	Q6IN84	353 aa	Known RBP	4.63	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	4.63	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	MEGF10	Q96KG7	1140 aa		4.63	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	DHRS1	Q96LJ7	313 aa		4.63	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	MIPEP	Q99797	713 aa		4.63	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	KCNF1	Q9H3M0	494 aa		4.63	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	PFDN2	Q9UHV9	154 aa		4.63	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	ZNF214	Q9UL59	606 aa	Predicted RBP	4.63	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	DYNC1LI2	O43237	492 aa	Predicted RBP	4.62	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	CLEC3A	O75596	197 aa		4.62	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	MAP4	P27816	1152 aa	Known RBP	4.62	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	RASGRF1	Q13972	1273 aa		4.62	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	MTERF2	Q49AM1	385 aa		4.62	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	SPATC1	Q76KD6	591 aa		4.62	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	EEPD1	Q7L9B9	569 aa		4.62	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	CDH24	Q86UP0	819 aa		4.62	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	TXNRD3	Q86VQ6	643 aa		4.62	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	PPFIBP1	Q86W92	1011 aa		4.62	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	FAM20C	Q8IXL6	584 aa		4.62	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	DZIP1L	Q8IYY4	767 aa	Known RBP	4.62	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	ARMC10	Q8N2F6	343 aa		4.62	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	NLGN1	Q8N2Q7	840 aa		4.62	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	LILRB2	Q8N423	598 aa		4.62	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	MFSD2A	Q8NA29	543 aa		4.62	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	RIN3	Q8TB24	985 aa		4.62	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	KLHL6	Q8WZ60	621 aa		4.62	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	ZNF512B	Q96KM6	892 aa	Predicted RBP	4.62	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	RNPC3	Q96LT9	517 aa	Known RBP	4.62	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	MYRFL	Q96LU7	910 aa		4.62	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	SUCO	Q9UBS9	1254 aa	Known RBP	4.62	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	FAM95C	A0A1B0GW59	222 aa		4.61	□□□□□ -1.67
CALCOCO2-216	ENST00000509784		C9IYK1	514 aa		4.61	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	SLITRK5	O94991	958 aa		4.61	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	CANX	P27824	592 aa	Known RBP	4.61	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	PMS1	P54277	932 aa	Known RBP	4.61	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	CDK5R2	Q13319	367 aa		4.61	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	MAP7	Q14244	749 aa		4.61	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	NFKBIB	Q15653	356 aa		4.61	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	UVSSA	Q2YD98	709 aa		4.61	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	BBS9	Q3SYG4	887 aa		4.61	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	LETMD1	Q6P1Q0	360 aa		4.61	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	ALYREF	Q86V81	257 aa	Known RBP	4.61	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	CCDC144CP	Q8IYA2	1237 aa		4.61	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	PPP1R13L	Q8WUF5	828 aa		4.61	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	EZH1	Q92800	747 aa	Predicted RBP	4.61	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	CEP131	Q9UPN4	1083 aa		4.61	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	KRBA1	A5PL33	1030 aa		4.6	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	SUSD5	O60279	629 aa		4.6	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	DIAPH1	O60610	1272 aa	Known RBP	4.6	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	CHRNA4	P43681	627 aa		4.6	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	SSRP1	Q08945	709 aa	Known RBP	4.6	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	TCEAL1	Q15170	157 aa		4.6	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	PAOX	Q6QHF9	649 aa		4.6	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	BEND4	Q6ZU67	534 aa		4.6	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	TOP6BL	Q8N6T0	577 aa		4.6	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	ST13P5	Q8NFI4	369 aa	Predicted RBP	4.6	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	DNAJB8	Q8NHS0	232 aa		4.6	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	SH3TC2	Q8TF17	1288 aa		4.6	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	KREMEN1	Q96MU8	473 aa		4.6	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	PSMG3-AS1	Q96PY0	264 aa		4.6	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	MKRN2	Q9H000	416 aa	Known RBP	4.6	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	KANSL2	Q9H9L4	492 aa		4.6	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	PRDM10	Q9NQV6	1147 aa		4.6	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	C1GALT1	Q9NS00	363 aa		4.6	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	KDM2B	Q8NHM5	1336 aa		4.6	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	FAM181B	A6NEQ2	426 aa		4.59	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	C1QTNF9B	B2RNN3	333 aa		4.59	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	RBAK-RBAKDN	I3L0D1	243 aa		4.59	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	DHX15	O43143	795 aa	Known RBP	4.59	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	LEFTY1	O75610	366 aa		4.59	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	SLC10A6	Q3KNW5	377 aa		4.59	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	SV2C	Q496J9	727 aa		4.59	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	AXDND1	Q5T1B0	1012 aa	Predicted RBP	4.59	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	NBPF12	Q5TAG4	269 aa	Predicted RBP	4.59	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	DCAF15	Q66K64	600 aa		4.59	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	HEATR6	Q6AI08	1181 aa	Known RBP	4.59	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	SEZ6L2	Q6UXD5	910 aa		4.59	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	ZNF662	Q6ZS27	426 aa		4.59	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	CD163	Q86VB7	1156 aa		4.59	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	PPP1R14A	Q96A00	147 aa		4.59	□□□□□ -1.67
CALCOCO2-216	ENST00000509784	APBA2	Q99767	749 aa		4.59	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms