RNA–Protein interactions for RNA: ENST00000509748.1

LIN54-208, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 5

Gene LIN54, Length 729 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-208ENST00000509748 GJD2Q9UKL4 321 aa25.56■■□□□ 1.68
LIN54-208ENST00000509748 USP17L12C9JPN9 530 aa25.55■■□□□ 1.68
LIN54-208ENST00000509748 USP17L21D6R901 530 aa25.55■■□□□ 1.68
LIN54-208ENST00000509748 ZYXQ15942 572 aaKnown RBP25.55■■□□□ 1.68
LIN54-208ENST00000509748 PI4K2BQ8TCG2 481 aa25.55■■□□□ 1.68
LIN54-208ENST00000509748 PXYLP1Q8TE99 480 aa25.55■■□□□ 1.68
LIN54-208ENST00000509748 OSBP2Q969R2 916 aa25.55■■□□□ 1.68
LIN54-208ENST00000509748 COA7Q96BR5 231 aa25.55■■□□□ 1.68
LIN54-208ENST00000509748 SWAP70Q9UH65 585 aa25.55■■□□□ 1.68
LIN54-208ENST00000509748 SLC4A4Q9Y6R1 1079 aa25.55■■□□□ 1.68
LIN54-208ENST00000509748 A0A1W2PRG0 241 aa25.54■■□□□ 1.68
LIN54-208ENST00000509748 ELNP15502 786 aa25.54■■□□□ 1.68
LIN54-208ENST00000509748 USP14P54578 494 aa25.54■■□□□ 1.68
LIN54-208ENST00000509748 Q3C1V9 767 aa25.54■■□□□ 1.68
LIN54-208ENST00000509748 FEZ1Q99689 392 aa25.54■■□□□ 1.68
LIN54-208ENST00000509748 TTC41PQ6P2S7 1318 aa25.54■■□□□ 1.68
LIN54-208ENST00000509748 PLXNB2O15031 1838 aa25.53■■□□□ 1.68
LIN54-208ENST00000509748 RNF113AO15541 343 aaKnown RBP25.53■■□□□ 1.68
LIN54-208ENST00000509748 CCL5P13501 91 aa25.53■■□□□ 1.68
LIN54-208ENST00000509748 CTR9Q6PD62 1173 aa25.53■■□□□ 1.68
LIN54-208ENST00000509748 CATSPERGQ6ZRH7 1159 aa25.53■■□□□ 1.68
LIN54-208ENST00000509748 SIAH1Q8IUQ4 282 aa25.53■■□□□ 1.68
LIN54-208ENST00000509748 SHISA4Q96DD7 197 aa25.53■■□□□ 1.68
LIN54-208ENST00000509748 SALL3Q9BXA9 1300 aa25.53■■□□□ 1.68
LIN54-208ENST00000509748 USP17L15C9J2P7 530 aa25.52■■□□□ 1.68
LIN54-208ENST00000509748 USP17L13C9JLJ4 530 aa25.52■■□□□ 1.68
LIN54-208ENST00000509748 USP17L11C9JVI0 530 aa25.52■■□□□ 1.68
LIN54-208ENST00000509748 USP17L18D6R9N7 530 aa25.52■■□□□ 1.68
LIN54-208ENST00000509748 USP17L22D6RA61 530 aa25.52■■□□□ 1.68
LIN54-208ENST00000509748 USP17L17D6RBQ6 530 aa25.52■■□□□ 1.68
LIN54-208ENST00000509748 USP17L19D6RCP7 530 aa25.52■■□□□ 1.68
LIN54-208ENST00000509748 USP17L20D6RJB6 530 aa25.52■■□□□ 1.68
LIN54-208ENST00000509748 VCAM1P19320 739 aa25.52■■□□□ 1.68
LIN54-208ENST00000509748 CDK8P49336 464 aa25.52■■□□□ 1.68
LIN54-208ENST00000509748 USP17L24Q0WX57 530 aa25.52■■□□□ 1.68
LIN54-208ENST00000509748 PRPF38BQ5VTL8 546 aaKnown RBP25.52■■□□□ 1.68
LIN54-208ENST00000509748 GPRC5AQ8NFJ5 357 aa25.52■■□□□ 1.68
LIN54-208ENST00000509748 BIN2Q9UBW5 565 aaPredicted RBP25.52■■□□□ 1.68
LIN54-208ENST00000509748 MYH8P13535 1937 aa25.52■■□□□ 1.68
LIN54-208ENST00000509748 GSG1L2A8MUP6 293 aa25.51■■□□□ 1.67
LIN54-208ENST00000509748 MPHOSPH10O00566 681 aaKnown RBP25.51■■□□□ 1.67
LIN54-208ENST00000509748 AKR1B1P15121 316 aa25.51■■□□□ 1.67
LIN54-208ENST00000509748 UBXN2AP68543 259 aa25.51■■□□□ 1.67
LIN54-208ENST00000509748 TMEM179Q6ZVK1 233 aa25.51■■□□□ 1.67
LIN54-208ENST00000509748 C16orf86Q6ZW13 317 aa25.51■■□□□ 1.67
LIN54-208ENST00000509748 APPBP2Q92624 585 aa25.51■■□□□ 1.67
LIN54-208ENST00000509748 UNC93B1Q9H1C4 597 aa25.51■■□□□ 1.67
LIN54-208ENST00000509748 CNMDO75829 334 aa25.5■■□□□ 1.67
LIN54-208ENST00000509748 GJB1P08034 283 aa25.5■■□□□ 1.67
LIN54-208ENST00000509748 ERVK-9P63128 1117 aa25.5■■□□□ 1.67
LIN54-208ENST00000509748 ERVK-24P63145 666 aa25.5■■□□□ 1.67
LIN54-208ENST00000509748 HDAC1Q13547 482 aaPredicted RBP25.5■■□□□ 1.67
LIN54-208ENST00000509748 GTF3C2Q8WUA4 911 aaPredicted RBP25.5■■□□□ 1.67
LIN54-208ENST00000509748 RNF208Q9H0X6 261 aa25.5■■□□□ 1.67
LIN54-208ENST00000509748 GLRX3O76003 335 aaKnown RBP25.49■■□□□ 1.67
LIN54-208ENST00000509748 INHAP05111 366 aa25.49■■□□□ 1.67
LIN54-208ENST00000509748 ZFYP08048 801 aaPredicted RBP25.49■■□□□ 1.67
LIN54-208ENST00000509748 GJA8P48165 433 aa25.49■■□□□ 1.67
LIN54-208ENST00000509748 KIAA1755Q5JYT7 1200 aa25.49■■□□□ 1.67
LIN54-208ENST00000509748 CLEC10AQ8IUN9 316 aa25.49■■□□□ 1.67
LIN54-208ENST00000509748 PORCNQ9H237 461 aa25.49■■□□□ 1.67
LIN54-208ENST00000509748 M0R2C6 588 aa25.48■■□□□ 1.67
LIN54-208ENST00000509748 ERC2O15083 957 aa25.48■■□□□ 1.67
LIN54-208ENST00000509748 MX1P20591 662 aa25.48■■□□□ 1.67
LIN54-208ENST00000509748 SBK1Q52WX2 424 aa25.48■■□□□ 1.67
LIN54-208ENST00000509748 GIMAP6Q6P9H5 292 aa25.48■■□□□ 1.67
LIN54-208ENST00000509748 LBX2Q6XYB7 198 aa25.48■■□□□ 1.67
LIN54-208ENST00000509748 DDRGK1Q96HY6 314 aa25.48■■□□□ 1.67
LIN54-208ENST00000509748 CCDC17Q96LX7 622 aa25.48■■□□□ 1.67
LIN54-208ENST00000509748 RPAP3Q9H6T3 665 aaPredicted RBP25.48■■□□□ 1.67
LIN54-208ENST00000509748 RABGAP1Q9Y3P9 1069 aa25.48■■□□□ 1.67
LIN54-208ENST00000509748 ANKRD45Q5TZF3 282 aa25.47■■□□□ 1.67
LIN54-208ENST00000509748 PAGR1Q9BTK6 254 aa25.47■■□□□ 1.67
LIN54-208ENST00000509748 RLFQ13129 1914 aa25.47■■□□□ 1.67
LIN54-208ENST00000509748 GPAA1O43292 621 aa25.46■■□□□ 1.67
LIN54-208ENST00000509748 AMOTL1Q8IY63 956 aa25.46■■□□□ 1.67
LIN54-208ENST00000509748 NKX2-3Q8TAU0 364 aa25.46■■□□□ 1.67
LIN54-208ENST00000509748 USP6NLQ92738 828 aa25.46■■□□□ 1.67
LIN54-208ENST00000509748 GCC1Q96CN9 775 aa25.46■■□□□ 1.67
LIN54-208ENST00000509748 EPB41L4AQ9HCS5 686 aaPredicted RBP25.46■■□□□ 1.67
LIN54-208ENST00000509748 ARPP21Q9UBL0 812 aaPredicted RBP25.46■■□□□ 1.67
LIN54-208ENST00000509748 SPDYE16A6NNV3 312 aaPredicted RBP25.45■■□□□ 1.66
LIN54-208ENST00000509748 MAPK4P31152 587 aa25.45■■□□□ 1.66
LIN54-208ENST00000509748 UBE2Q1Q7Z7E8 422 aa25.45■■□□□ 1.66
LIN54-208ENST00000509748 SEC62Q99442 399 aaKnown RBP25.45■■□□□ 1.66
LIN54-208ENST00000509748 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.45■■□□□ 1.66
LIN54-208ENST00000509748 BTBD7Q9P203 1132 aa25.45■■□□□ 1.66
LIN54-208ENST00000509748 STAP2Q9UGK3 403 aa25.45■■□□□ 1.66
LIN54-208ENST00000509748 TMX2Q9Y320 296 aa25.45■■□□□ 1.66
LIN54-208ENST00000509748 ICA1Q05084 483 aa25.44■■□□□ 1.66
LIN54-208ENST00000509748 U2AF1L4Q8WU68 220 aaKnown RBP25.44■■□□□ 1.66
LIN54-208ENST00000509748 PAK6Q9NQU5 681 aaPredicted RBP25.44■■□□□ 1.66
LIN54-208ENST00000509748 CEP290O15078 2479 aa25.43■■□□□ 1.66
LIN54-208ENST00000509748 SGPL1O95470 568 aa25.43■■□□□ 1.66
LIN54-208ENST00000509748 TRIM32Q13049 653 aa25.43■■□□□ 1.66
LIN54-208ENST00000509748 AAMPQ13685 434 aa25.43■■□□□ 1.66
LIN54-208ENST00000509748 ZMYM1Q5SVZ6 1142 aa25.43■■□□□ 1.66
LIN54-208ENST00000509748 MORN1Q5T089 497 aa25.43■■□□□ 1.66
LIN54-208ENST00000509748 GPR142Q7Z601 462 aa25.43■■□□□ 1.66
LIN54-208ENST00000509748 GREB1LQ9C091 1923 aaPredicted RBP25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms