RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 Q3C1V9 767 aa19.62■□□□□ 0.73
LMNA-222ENST00000508500 USP17L2Q6R6M4 530 aa19.62■□□□□ 0.73
LMNA-222ENST00000508500 COA7Q96BR5 231 aa19.62■□□□□ 0.73
LMNA-222ENST00000508500 C12orf42Q96LP6 360 aa19.62■□□□□ 0.73
LMNA-222ENST00000508500 RNF208Q9H0X6 261 aa19.62■□□□□ 0.73
LMNA-222ENST00000508500 BIN2Q9UBW5 565 aaPredicted RBP19.62■□□□□ 0.73
LMNA-222ENST00000508500 MBD4O95243 580 aa19.61■□□□□ 0.73
LMNA-222ENST00000508500 INHAP05111 366 aa19.61■□□□□ 0.73
LMNA-222ENST00000508500 UBXN2AP68543 259 aa19.61■□□□□ 0.73
LMNA-222ENST00000508500 RAB3GAP1Q15042 981 aa19.61■□□□□ 0.73
LMNA-222ENST00000508500 ZYXQ15942 572 aaKnown RBP19.61■□□□□ 0.73
LMNA-222ENST00000508500 SLC44A5Q8NCS7 719 aa19.61■□□□□ 0.73
LMNA-222ENST00000508500 PRO3102Q9H379 93 aa19.61■□□□□ 0.73
LMNA-222ENST00000508500 PCDHB15Q9Y5E8 787 aa19.61■□□□□ 0.73
LMNA-222ENST00000508500 SEPT2Q15019 361 aa19.6■□□□□ 0.73
LMNA-222ENST00000508500 UBE3CQ15386 1083 aa19.6■□□□□ 0.73
LMNA-222ENST00000508500 DYNLL2Q96FJ2 89 aa19.6■□□□□ 0.73
LMNA-222ENST00000508500 GREB1LQ9C091 1923 aaPredicted RBP19.59■□□□□ 0.73
LMNA-222ENST00000508500 CYP2D7A0A087X1C5 515 aa19.59■□□□□ 0.73
LMNA-222ENST00000508500 A0A1W2PRG0 241 aa19.59■□□□□ 0.73
LMNA-222ENST00000508500 KIAA1683Q9H0B3 1180 aa19.59■□□□□ 0.73
LMNA-222ENST00000508500 PUS7LQ9H0K6 701 aaKnown RBP19.59■□□□□ 0.73
LMNA-222ENST00000508500 TAOK2Q9UL54 1235 aa19.59■□□□□ 0.73
LMNA-222ENST00000508500 ZNFX1Q9P2E3 1918 aaKnown RBP19.59■□□□□ 0.73
LMNA-222ENST00000508500 COL11A1P12107 1806 aaPredicted RBP19.58■□□□□ 0.73
LMNA-222ENST00000508500 CNMDO75829 334 aa19.58■□□□□ 0.72
LMNA-222ENST00000508500 TRIM32Q13049 653 aa19.58■□□□□ 0.72
LMNA-222ENST00000508500 TSHZ3Q63HK5 1081 aa19.58■□□□□ 0.72
LMNA-222ENST00000508500 NKX2-3Q8TAU0 364 aa19.58■□□□□ 0.72
LMNA-222ENST00000508500 U2AF1L4Q8WU68 220 aaKnown RBP19.58■□□□□ 0.72
LMNA-222ENST00000508500 PORCNQ9H237 461 aa19.58■□□□□ 0.72
LMNA-222ENST00000508500 CABP5Q9NP86 173 aa19.58■□□□□ 0.72
LMNA-222ENST00000508500 ECHDC1Q9NTX5 307 aa19.58■□□□□ 0.72
LMNA-222ENST00000508500 A0A0G2JMZ2 1700 aa19.57■□□□□ 0.72
LMNA-222ENST00000508500 SGPL1O95470 568 aa19.57■□□□□ 0.72
LMNA-222ENST00000508500 VCAM1P19320 739 aa19.57■□□□□ 0.72
LMNA-222ENST00000508500 ERVK-9P63128 1117 aa19.57■□□□□ 0.72
LMNA-222ENST00000508500 ERVK-24P63145 666 aa19.57■□□□□ 0.72
LMNA-222ENST00000508500 CATSPERGQ6ZRH7 1159 aa19.57■□□□□ 0.72
LMNA-222ENST00000508500 SIAH1Q8IUQ4 282 aa19.57■□□□□ 0.72
LMNA-222ENST00000508500 GPRC5AQ8NFJ5 357 aa19.57■□□□□ 0.72
LMNA-222ENST00000508500 FEZ1Q99689 392 aa19.57■□□□□ 0.72
LMNA-222ENST00000508500 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.57■□□□□ 0.722e-7■■■■■ 29.7
LMNA-222ENST00000508500 USP17L15C9J2P7 530 aa19.56■□□□□ 0.72
LMNA-222ENST00000508500 USP17L13C9JLJ4 530 aa19.56■□□□□ 0.72
LMNA-222ENST00000508500 USP17L11C9JVI0 530 aa19.56■□□□□ 0.72
LMNA-222ENST00000508500 USP17L18D6R9N7 530 aa19.56■□□□□ 0.72
LMNA-222ENST00000508500 USP17L22D6RA61 530 aa19.56■□□□□ 0.72
LMNA-222ENST00000508500 USP17L17D6RBQ6 530 aa19.56■□□□□ 0.72
LMNA-222ENST00000508500 USP17L19D6RCP7 530 aa19.56■□□□□ 0.72
LMNA-222ENST00000508500 USP17L20D6RJB6 530 aa19.56■□□□□ 0.72
LMNA-222ENST00000508500 USP17L24Q0WX57 530 aa19.56■□□□□ 0.72
LMNA-222ENST00000508500 KIAA1755Q5JYT7 1200 aa19.56■□□□□ 0.72
LMNA-222ENST00000508500 C12orf60Q5U649 245 aa19.56■□□□□ 0.72
LMNA-222ENST00000508500 YTHDC1Q96MU7 727 aaKnown RBP19.56■□□□□ 0.72
LMNA-222ENST00000508500 PAGR1Q9BTK6 254 aa19.56■□□□□ 0.72
LMNA-222ENST00000508500 PAK6Q9NQU5 681 aaPredicted RBP19.56■□□□□ 0.72
LMNA-222ENST00000508500 ATP8A2Q9NTI2 1148 aa19.56■□□□□ 0.72
LMNA-222ENST00000508500 FRMPD3Q5JV73 1810 aa19.55■□□□□ 0.72
LMNA-222ENST00000508500 USP17L12C9JPN9 530 aa19.55■□□□□ 0.72
LMNA-222ENST00000508500 USP17L21D6R901 530 aa19.55■□□□□ 0.72
LMNA-222ENST00000508500 AKR1B1P15121 316 aa19.55■□□□□ 0.72
LMNA-222ENST00000508500 USP14P54578 494 aa19.55■□□□□ 0.72
LMNA-222ENST00000508500 CLEC10AQ8IUN9 316 aa19.55■□□□□ 0.72
LMNA-222ENST00000508500 TRIB2Q92519 343 aa19.55■□□□□ 0.72
LMNA-222ENST00000508500 USP6NLQ92738 828 aa19.55■□□□□ 0.72
LMNA-222ENST00000508500 MPHOSPH10O00566 681 aaKnown RBP19.54■□□□□ 0.72
LMNA-222ENST00000508500 CYP2B6P20813 491 aa19.54■□□□□ 0.72
LMNA-222ENST00000508500 RRP1P56182 461 aaKnown RBP19.54■□□□□ 0.72
LMNA-222ENST00000508500 KBTBD3Q8NAB2 608 aa19.54■□□□□ 0.72
LMNA-222ENST00000508500 OTUD7AQ8TE49 926 aaPredicted RBP19.54■□□□□ 0.72
LMNA-222ENST00000508500 DEFB118Q96PH6 123 aa19.54■□□□□ 0.72
LMNA-222ENST00000508500 RPAP3Q9H6T3 665 aaPredicted RBP19.54■□□□□ 0.72
LMNA-222ENST00000508500 BTBD7Q9P203 1132 aa19.54■□□□□ 0.72
LMNA-222ENST00000508500 SWAP70Q9UH65 585 aa19.54■□□□□ 0.72
LMNA-222ENST00000508500 SLC4A4Q9Y6R1 1079 aa19.54■□□□□ 0.72
LMNA-222ENST00000508500 MYH4Q9Y623 1939 aa19.54■□□□□ 0.72
LMNA-222ENST00000508500 HMGCRP04035 888 aa19.53■□□□□ 0.72
LMNA-222ENST00000508500 CDK8P49336 464 aa19.53■□□□□ 0.72
LMNA-222ENST00000508500 MORN1Q5T089 497 aa19.53■□□□□ 0.72
LMNA-222ENST00000508500 CTR9Q6PD62 1173 aa19.53■□□□□ 0.72
LMNA-222ENST00000508500 LBX2Q6XYB7 198 aa19.53■□□□□ 0.72
LMNA-222ENST00000508500 GPR142Q7Z601 462 aa19.53■□□□□ 0.72
LMNA-222ENST00000508500 OSBP2Q969R2 916 aa19.53■□□□□ 0.72
LMNA-222ENST00000508500 STRBPQ96SI9 672 aaKnown RBP19.53■□□□□ 0.72
LMNA-222ENST00000508500 CRISPLD2Q9H0B8 497 aa19.53■□□□□ 0.72
LMNA-222ENST00000508500 RBM27Q9P2N5 1060 aaKnown RBP19.53■□□□□ 0.72
LMNA-222ENST00000508500 RABGAP1Q9Y3P9 1069 aa19.53■□□□□ 0.72
LMNA-222ENST00000508500 SPDYE16A6NNV3 312 aaPredicted RBP19.52■□□□□ 0.72
LMNA-222ENST00000508500 MAPK4P31152 587 aa19.52■□□□□ 0.72
LMNA-222ENST00000508500 ZSCAN25Q6NSZ9 544 aa19.52■□□□□ 0.72
LMNA-222ENST00000508500 CHRDL2Q6WN34 429 aa19.52■□□□□ 0.72
LMNA-222ENST00000508500 TMEM179Q6ZVK1 233 aa19.52■□□□□ 0.72
LMNA-222ENST00000508500 C16orf86Q6ZW13 317 aa19.52■□□□□ 0.72
LMNA-222ENST00000508500 GTF3C2Q8WUA4 911 aaPredicted RBP19.52■□□□□ 0.72
LMNA-222ENST00000508500 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.52■□□□□ 0.72
LMNA-222ENST00000508500 GSG1L2A8MUP6 293 aa19.51■□□□□ 0.71
LMNA-222ENST00000508500 CCL14Q16627 93 aa19.51■□□□□ 0.71
LMNA-222ENST00000508500 MAP3K21Q5TCX8 1036 aa19.51■□□□□ 0.71
LMNA-222ENST00000508500 PI4K2BQ8TCG2 481 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms