RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 HDAC1Q13547 482 aaPredicted RBP10.93□□□□□ -0.66
PDLIM5-209ENST00000506632 SEPT2Q15019 361 aa10.93□□□□□ -0.66
PDLIM5-209ENST00000506632 RAB3GAP1Q15042 981 aa10.93□□□□□ -0.66
PDLIM5-209ENST00000506632 C12orf60Q5U649 245 aa10.93□□□□□ -0.66
PDLIM5-209ENST00000506632 POTEEQ6S8J3 1075 aa10.93□□□□□ -0.66
PDLIM5-209ENST00000506632 SLC44A5Q8NCS7 719 aa10.93□□□□□ -0.66
PDLIM5-209ENST00000506632 SLAIN1Q8ND83 568 aa10.93□□□□□ -0.66
PDLIM5-209ENST00000506632 ACER1Q8TDN7 264 aa10.93□□□□□ -0.66
PDLIM5-209ENST00000506632 OTUD7AQ8TE49 926 aaPredicted RBP10.93□□□□□ -0.66
PDLIM5-209ENST00000506632 OSBP2Q969R2 916 aa10.93□□□□□ -0.66
PDLIM5-209ENST00000506632 STRBPQ96SI9 672 aaKnown RBP10.93□□□□□ -0.66
PDLIM5-209ENST00000506632 P2RX7Q99572 595 aaKnown RBP10.93□□□□□ -0.66
PDLIM5-209ENST00000506632 TMEM106CQ9BVX2 250 aa10.93□□□□□ -0.66
PDLIM5-209ENST00000506632 CABP5Q9NP86 173 aa10.93□□□□□ -0.66
PDLIM5-209ENST00000506632 SWAP70Q9UH65 585 aa10.93□□□□□ -0.66
PDLIM5-209ENST00000506632 USP17L12C9JPN9 530 aa10.92□□□□□ -0.66
PDLIM5-209ENST00000506632 USP17L21D6R901 530 aa10.92□□□□□ -0.66
PDLIM5-209ENST00000506632 RNF113AO15541 343 aaKnown RBP10.92□□□□□ -0.66
PDLIM5-209ENST00000506632 ZFYP08048 801 aaPredicted RBP10.92□□□□□ -0.66
PDLIM5-209ENST00000506632 USP14P54578 494 aa10.92□□□□□ -0.66
PDLIM5-209ENST00000506632 AAMPQ13685 434 aa10.92□□□□□ -0.66
PDLIM5-209ENST00000506632 MTFR1Q15390 333 aa10.92□□□□□ -0.66
PDLIM5-209ENST00000506632 PXYLP1Q8TE99 480 aa10.92□□□□□ -0.66
PDLIM5-209ENST00000506632 GTF3C2Q8WUA4 911 aaPredicted RBP10.92□□□□□ -0.66
PDLIM5-209ENST00000506632 SPOCK2Q92563 424 aa10.92□□□□□ -0.66
PDLIM5-209ENST00000506632 APPBP2Q92624 585 aa10.92□□□□□ -0.66
PDLIM5-209ENST00000506632 DYNLL2Q96FJ2 89 aa10.92□□□□□ -0.66
PDLIM5-209ENST00000506632 FEZ1Q99689 392 aa10.92□□□□□ -0.66
PDLIM5-209ENST00000506632 TXNRD2Q9NNW7 524 aa10.92□□□□□ -0.66
PDLIM5-209ENST00000506632 RBPJLQ9UBG7 517 aa10.92□□□□□ -0.66
PDLIM5-209ENST00000506632 GJD2Q9UKL4 321 aa10.92□□□□□ -0.66
PDLIM5-209ENST00000506632 SLC4A4Q9Y6R1 1079 aa10.92□□□□□ -0.66
PDLIM5-209ENST00000506632 PLXNB2O15031 1838 aa10.92□□□□□ -0.66
PDLIM5-209ENST00000506632 MYH8P13535 1937 aa10.92□□□□□ -0.66
PDLIM5-209ENST00000506632 CYP2D7A0A087X1C5 515 aa10.91□□□□□ -0.66
PDLIM5-209ENST00000506632 A0A1W2PRG0 241 aa10.91□□□□□ -0.66
PDLIM5-209ENST00000506632 GSG1L2A8MUP6 293 aa10.91□□□□□ -0.66
PDLIM5-209ENST00000506632 ERC2O15083 957 aa10.91□□□□□ -0.66
PDLIM5-209ENST00000506632 ADCY3O60266 1144 aa10.91□□□□□ -0.66
PDLIM5-209ENST00000506632 PEX10O60683 326 aa10.91□□□□□ -0.66
PDLIM5-209ENST00000506632 GLRX3O76003 335 aaKnown RBP10.91□□□□□ -0.66
PDLIM5-209ENST00000506632 VCAM1P19320 739 aa10.91□□□□□ -0.66
PDLIM5-209ENST00000506632 CDK8P49336 464 aa10.91□□□□□ -0.66
PDLIM5-209ENST00000506632 ZYXQ15942 572 aaKnown RBP10.91□□□□□ -0.66
PDLIM5-209ENST00000506632 SBK1Q52WX2 424 aa10.91□□□□□ -0.66
PDLIM5-209ENST00000506632 GIMAP6Q6P9H5 292 aa10.91□□□□□ -0.66
PDLIM5-209ENST00000506632 CTR9Q6PD62 1173 aa10.91□□□□□ -0.66
PDLIM5-209ENST00000506632 LBX2Q6XYB7 198 aa10.91□□□□□ -0.66
PDLIM5-209ENST00000506632 CATSPERGQ6ZRH7 1159 aa10.91□□□□□ -0.66
PDLIM5-209ENST00000506632 TMEM179Q6ZVK1 233 aa10.91□□□□□ -0.66
PDLIM5-209ENST00000506632 C16orf86Q6ZW13 317 aa10.91□□□□□ -0.66
PDLIM5-209ENST00000506632 COA7Q96BR5 231 aa10.91□□□□□ -0.66
PDLIM5-209ENST00000506632 CCDC17Q96LX7 622 aa10.91□□□□□ -0.66
PDLIM5-209ENST00000506632 CENPFP49454 3210 aa10.91□□□□□ -0.66
PDLIM5-209ENST00000506632 ROBO3Q96MS0 1386 aa10.9□□□□□ -0.66
PDLIM5-209ENST00000506632 GREB1LQ9C091 1923 aaPredicted RBP10.9□□□□□ -0.66
PDLIM5-209ENST00000506632 USP17L15C9J2P7 530 aa10.9□□□□□ -0.66
PDLIM5-209ENST00000506632 USP17L13C9JLJ4 530 aa10.9□□□□□ -0.66
PDLIM5-209ENST00000506632 USP17L11C9JVI0 530 aa10.9□□□□□ -0.66
PDLIM5-209ENST00000506632 USP17L18D6R9N7 530 aa10.9□□□□□ -0.66
PDLIM5-209ENST00000506632 USP17L22D6RA61 530 aa10.9□□□□□ -0.66
PDLIM5-209ENST00000506632 USP17L17D6RBQ6 530 aa10.9□□□□□ -0.66
PDLIM5-209ENST00000506632 USP17L19D6RCP7 530 aa10.9□□□□□ -0.66
PDLIM5-209ENST00000506632 USP17L20D6RJB6 530 aa10.9□□□□□ -0.66
PDLIM5-209ENST00000506632 CNMDO75829 334 aa10.9□□□□□ -0.66
PDLIM5-209ENST00000506632 MYCP01106 439 aaPredicted RBP10.9□□□□□ -0.66
PDLIM5-209ENST00000506632 CCL5P13501 91 aa10.9□□□□□ -0.66
PDLIM5-209ENST00000506632 AKR1B1P15121 316 aa10.9□□□□□ -0.66
PDLIM5-209ENST00000506632 ELNP15502 786 aa10.9□□□□□ -0.66
PDLIM5-209ENST00000506632 MX1P20591 662 aa10.9□□□□□ -0.66
PDLIM5-209ENST00000506632 ERVK-9P63128 1117 aa10.9□□□□□ -0.66
PDLIM5-209ENST00000506632 ERVK-24P63145 666 aa10.9□□□□□ -0.66
PDLIM5-209ENST00000506632 USP17L24Q0WX57 530 aa10.9□□□□□ -0.66
PDLIM5-209ENST00000506632 PRPF38BQ5VTL8 546 aaKnown RBP10.9□□□□□ -0.66
PDLIM5-209ENST00000506632 SIAH1Q8IUQ4 282 aa10.9□□□□□ -0.66
PDLIM5-209ENST00000506632 GPRC5AQ8NFJ5 357 aa10.9□□□□□ -0.66
PDLIM5-209ENST00000506632 GCC1Q96CN9 775 aa10.9□□□□□ -0.66
PDLIM5-209ENST00000506632 SHISA4Q96DD7 197 aa10.9□□□□□ -0.66
PDLIM5-209ENST00000506632 DDRGK1Q96HY6 314 aa10.9□□□□□ -0.66
PDLIM5-209ENST00000506632 EPB41L4AQ9HCS5 686 aaPredicted RBP10.9□□□□□ -0.66
PDLIM5-209ENST00000506632 ARPP21Q9UBL0 812 aaPredicted RBP10.9□□□□□ -0.66
PDLIM5-209ENST00000506632 STAP2Q9UGK3 403 aa10.9□□□□□ -0.66
PDLIM5-209ENST00000506632 RLFQ13129 1914 aa10.9□□□□□ -0.67
PDLIM5-209ENST00000506632 M0R2C6 588 aa10.89□□□□□ -0.67
PDLIM5-209ENST00000506632 MPHOSPH10O00566 681 aaKnown RBP10.89□□□□□ -0.67
PDLIM5-209ENST00000506632 GPAA1O43292 621 aa10.89□□□□□ -0.67
PDLIM5-209ENST00000506632 GJB1P08034 283 aa10.89□□□□□ -0.67
PDLIM5-209ENST00000506632 UBXN2AP68543 259 aa10.89□□□□□ -0.67
PDLIM5-209ENST00000506632 Q3C1V9 767 aa10.89□□□□□ -0.67
PDLIM5-209ENST00000506632 KIAA1755Q5JYT7 1200 aa10.89□□□□□ -0.67
PDLIM5-209ENST00000506632 AMOTL1Q8IY63 956 aa10.89□□□□□ -0.67
PDLIM5-209ENST00000506632 RPAP3Q9H6T3 665 aaPredicted RBP10.89□□□□□ -0.67
PDLIM5-209ENST00000506632 TMX2Q9Y320 296 aa10.89□□□□□ -0.67
PDLIM5-209ENST00000506632 RABGAP1Q9Y3P9 1069 aa10.89□□□□□ -0.67
PDLIM5-209ENST00000506632 BRCA2P51587 3418 aa10.89□□□□□ -0.67
PDLIM5-209ENST00000506632 A0A0G2JMZ2 1700 aa10.88□□□□□ -0.67
PDLIM5-209ENST00000506632 SPDYE16A6NNV3 312 aaPredicted RBP10.88□□□□□ -0.67
PDLIM5-209ENST00000506632 INHAP05111 366 aa10.88□□□□□ -0.67
PDLIM5-209ENST00000506632 GNAT2P19087 354 aa10.88□□□□□ -0.67
PDLIM5-209ENST00000506632 MAPK4P31152 587 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms