RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 CYP2D7A0A087X1C5 515 aa11.58□□□□□ -0.56
MSH5-218ENST00000494646 GUCY1A2P33402 732 aa11.58□□□□□ -0.56
MSH5-218ENST00000494646 HERVK_113P62684 666 aa11.58□□□□□ -0.56
MSH5-218ENST00000494646 GABPAQ06546 454 aa11.58□□□□□ -0.56
MSH5-218ENST00000494646 SLC44A5Q8NCS7 719 aa11.58□□□□□ -0.56
MSH5-218ENST00000494646 SLAIN1Q8ND83 568 aa11.58□□□□□ -0.56
MSH5-218ENST00000494646 PAGR1Q9BTK6 254 aa11.58□□□□□ -0.56
MSH5-218ENST00000494646 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.58□□□□□ -0.562e-13■■■□□ 18.3
MSH5-218ENST00000494646 PUS7LQ9H0K6 701 aaKnown RBP11.58□□□□□ -0.56
MSH5-218ENST00000494646 TXNRD2Q9NNW7 524 aa11.58□□□□□ -0.56
MSH5-218ENST00000494646 ECHDC1Q9NTX5 307 aa11.58□□□□□ -0.56
MSH5-218ENST00000494646 RBPJLQ9UBG7 517 aa11.58□□□□□ -0.56
MSH5-218ENST00000494646 GJD2Q9UKL4 321 aa11.58□□□□□ -0.56
MSH5-218ENST00000494646 SLC4A4Q9Y6R1 1079 aa11.58□□□□□ -0.56
MSH5-218ENST00000494646 INHAP05111 366 aa11.57□□□□□ -0.56
MSH5-218ENST00000494646 CYP2B6P20813 491 aa11.57□□□□□ -0.56
MSH5-218ENST00000494646 UBE3CQ15386 1083 aa11.57□□□□□ -0.56
MSH5-218ENST00000494646 ZSCAN25Q6NSZ9 544 aa11.57□□□□□ -0.56
MSH5-218ENST00000494646 STK11IPQ8N1F8 1099 aa11.57□□□□□ -0.56
MSH5-218ENST00000494646 GPRC5AQ8NFJ5 357 aa11.57□□□□□ -0.56
MSH5-218ENST00000494646 PXYLP1Q8TE99 480 aa11.57□□□□□ -0.56
MSH5-218ENST00000494646 PLXNB2O15031 1838 aa11.57□□□□□ -0.56
MSH5-218ENST00000494646 A0A1W2PRG0 241 aa11.56□□□□□ -0.56
MSH5-218ENST00000494646 USP17L15C9J2P7 530 aa11.56□□□□□ -0.56
MSH5-218ENST00000494646 USP17L13C9JLJ4 530 aa11.56□□□□□ -0.56
MSH5-218ENST00000494646 USP17L12C9JPN9 530 aa11.56□□□□□ -0.56
MSH5-218ENST00000494646 USP17L11C9JVI0 530 aa11.56□□□□□ -0.56
MSH5-218ENST00000494646 USP17L21D6R901 530 aa11.56□□□□□ -0.56
MSH5-218ENST00000494646 USP17L18D6R9N7 530 aa11.56□□□□□ -0.56
MSH5-218ENST00000494646 USP17L22D6RA61 530 aa11.56□□□□□ -0.56
MSH5-218ENST00000494646 USP17L17D6RBQ6 530 aa11.56□□□□□ -0.56
MSH5-218ENST00000494646 USP17L19D6RCP7 530 aa11.56□□□□□ -0.56
MSH5-218ENST00000494646 USP17L20D6RJB6 530 aa11.56□□□□□ -0.56
MSH5-218ENST00000494646 TULP1O00294 542 aaPredicted RBP11.56□□□□□ -0.56
MSH5-218ENST00000494646 TFRCP02786 760 aaKnown RBP11.56□□□□□ -0.56
MSH5-218ENST00000494646 GJB1P08034 283 aa11.56□□□□□ -0.56
MSH5-218ENST00000494646 RRP1P56182 461 aaKnown RBP11.56□□□□□ -0.56
MSH5-218ENST00000494646 USP17L24Q0WX57 530 aa11.56□□□□□ -0.56
MSH5-218ENST00000494646 TRIM32Q13049 653 aa11.56□□□□□ -0.56
MSH5-218ENST00000494646 IRF5Q13568 498 aa11.56□□□□□ -0.56
MSH5-218ENST00000494646 POTEEQ6S8J3 1075 aa11.56□□□□□ -0.56
MSH5-218ENST00000494646 CATSPERGQ6ZRH7 1159 aa11.56□□□□□ -0.56
MSH5-218ENST00000494646 CCAR1Q8IX12 1150 aaKnown RBP11.56□□□□□ -0.56
MSH5-218ENST00000494646 SHISA4Q96DD7 197 aa11.56□□□□□ -0.56
MSH5-218ENST00000494646 CRBNQ96SW2 442 aa11.56□□□□□ -0.56
MSH5-218ENST00000494646 ATP8A2Q9NTI2 1148 aa11.56□□□□□ -0.56
MSH5-218ENST00000494646 MORF4L1Q9UBU8 362 aa11.56□□□□□ -0.56
MSH5-218ENST00000494646 DDX60LQ5H9U9 1706 aaKnown RBP11.55□□□□□ -0.56
MSH5-218ENST00000494646 SGPL1O95470 568 aa11.55□□□□□ -0.56
MSH5-218ENST00000494646 AKR1B1P15121 316 aa11.55□□□□□ -0.56
MSH5-218ENST00000494646 GJA8P48165 433 aa11.55□□□□□ -0.56
MSH5-218ENST00000494646 CDK8P49336 464 aa11.55□□□□□ -0.56
MSH5-218ENST00000494646 USP14P54578 494 aa11.55□□□□□ -0.56
MSH5-218ENST00000494646 ERVK-9P63128 1117 aa11.55□□□□□ -0.56
MSH5-218ENST00000494646 ERVK-24P63145 666 aa11.55□□□□□ -0.56
MSH5-218ENST00000494646 C12orf60Q5U649 245 aa11.55□□□□□ -0.56
MSH5-218ENST00000494646 NKX2-3Q8TAU0 364 aa11.55□□□□□ -0.56
MSH5-218ENST00000494646 OTUD7AQ8TE49 926 aaPredicted RBP11.55□□□□□ -0.56
MSH5-218ENST00000494646 U2AF1L4Q8WU68 220 aaKnown RBP11.55□□□□□ -0.56
MSH5-218ENST00000494646 DPF3Q92784 378 aa11.55□□□□□ -0.56
MSH5-218ENST00000494646 C12orf42Q96LP6 360 aa11.55□□□□□ -0.56
MSH5-218ENST00000494646 DEFB118Q96PH6 123 aa11.55□□□□□ -0.56
MSH5-218ENST00000494646 KIAA1683Q9H0B3 1180 aa11.55□□□□□ -0.56
MSH5-218ENST00000494646 PORCNQ9H237 461 aa11.55□□□□□ -0.56
MSH5-218ENST00000494646 CEP290O15078 2479 aa11.54□□□□□ -0.56
MSH5-218ENST00000494646 MINDY4BA8MYZ0 360 aa11.54□□□□□ -0.56
MSH5-218ENST00000494646 CNMDO75829 334 aa11.54□□□□□ -0.56
MSH5-218ENST00000494646 VCAM1P19320 739 aa11.54□□□□□ -0.56
MSH5-218ENST00000494646 KIAA1755Q5JYT7 1200 aa11.54□□□□□ -0.56
MSH5-218ENST00000494646 CTR9Q6PD62 1173 aa11.54□□□□□ -0.56
MSH5-218ENST00000494646 CLEC10AQ8IUN9 316 aa11.54□□□□□ -0.56
MSH5-218ENST00000494646 KBTBD3Q8NAB2 608 aa11.54□□□□□ -0.56
MSH5-218ENST00000494646 OSBP2Q969R2 916 aa11.54□□□□□ -0.56
MSH5-218ENST00000494646 DDRGK1Q96HY6 314 aa11.54□□□□□ -0.56
MSH5-218ENST00000494646 GPATCH3Q96I76 525 aa11.54□□□□□ -0.56
MSH5-218ENST00000494646 STRBPQ96SI9 672 aaKnown RBP11.54□□□□□ -0.56
MSH5-218ENST00000494646 RPAP3Q9H6T3 665 aaPredicted RBP11.54□□□□□ -0.56
MSH5-218ENST00000494646 CWC22Q9HCG8 908 aaKnown RBP11.54□□□□□ -0.56
MSH5-218ENST00000494646 SWAP70Q9UH65 585 aa11.54□□□□□ -0.56
MSH5-218ENST00000494646 ZNFX1Q9P2E3 1918 aaKnown RBP11.53□□□□□ -0.56
MSH5-218ENST00000494646 RNF113AO15541 343 aaKnown RBP11.53□□□□□ -0.56
MSH5-218ENST00000494646 ATP2B2Q01814 1243 aa11.53□□□□□ -0.56
MSH5-218ENST00000494646 ANKRD45Q5TZF3 282 aa11.53□□□□□ -0.56
MSH5-218ENST00000494646 WDR78Q5VTH9 848 aa11.53□□□□□ -0.56
MSH5-218ENST00000494646 SAMD1Q6SPF0 538 aaPredicted RBP11.53□□□□□ -0.56
MSH5-218ENST00000494646 TMEM179Q6ZVK1 233 aa11.53□□□□□ -0.56
MSH5-218ENST00000494646 SIAH1Q8IUQ4 282 aa11.53□□□□□ -0.56
MSH5-218ENST00000494646 AMOTL1Q8IY63 956 aa11.53□□□□□ -0.56
MSH5-218ENST00000494646 NUDT12Q9BQG2 462 aa11.53□□□□□ -0.56
MSH5-218ENST00000494646 BTBD7Q9P203 1132 aa11.53□□□□□ -0.56
MSH5-218ENST00000494646 GSG1L2A8MUP6 293 aa11.52□□□□□ -0.57
MSH5-218ENST00000494646 MAPK4P31152 587 aa11.52□□□□□ -0.57
MSH5-218ENST00000494646 GPR142Q7Z601 462 aa11.52□□□□□ -0.57
MSH5-218ENST00000494646 PLEKHH3Q7Z736 793 aa11.52□□□□□ -0.57
MSH5-218ENST00000494646 SPICE1Q8N0Z3 855 aa11.52□□□□□ -0.57
MSH5-218ENST00000494646 GTF3C2Q8WUA4 911 aaPredicted RBP11.52□□□□□ -0.57
MSH5-218ENST00000494646 TRIB2Q92519 343 aa11.52□□□□□ -0.57
MSH5-218ENST00000494646 SEC62Q99442 399 aaKnown RBP11.52□□□□□ -0.57
MSH5-218ENST00000494646 TANGO6Q9C0B7 1094 aa11.52□□□□□ -0.57
MSH5-218ENST00000494646 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.52□□□□□ -0.577e-6■■■■□ 23.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms