RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 OPTNQ96CV9 577 aa18.56■□□□□ 0.56
HPS4-216ENST00000493455 CEP95Q96GE4 821 aa18.56■□□□□ 0.56
HPS4-216ENST00000493455 FEZ1Q99689 392 aa18.56■□□□□ 0.56
HPS4-216ENST00000493455 STX8Q9UNK0 236 aa18.56■□□□□ 0.56
HPS4-216ENST00000493455 MTMR7Q9Y216 660 aa18.56■□□□□ 0.56
HPS4-216ENST00000493455 ZHX2Q9Y6X8 837 aa18.56■□□□□ 0.56
HPS4-216ENST00000493455 TRIM75PA6NK02 468 aa18.55■□□□□ 0.56
HPS4-216ENST00000493455 IFIT3O14879 490 aaKnown RBP18.55■□□□□ 0.56
HPS4-216ENST00000493455 MCM5P33992 734 aa18.55■□□□□ 0.56
HPS4-216ENST00000493455 ANTXR2P58335 489 aa18.55■□□□□ 0.56
HPS4-216ENST00000493455 FGD1P98174 961 aa18.55■□□□□ 0.56
HPS4-216ENST00000493455 RGMBQ6NW40 437 aa18.55■□□□□ 0.56
HPS4-216ENST00000493455 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.55■□□□□ 0.56
HPS4-216ENST00000493455 AS3MTQ9HBK9 375 aa18.55■□□□□ 0.56
HPS4-216ENST00000493455 TNKSO95271 1327 aa18.54■□□□□ 0.56
HPS4-216ENST00000493455 ERICH2A1L162 156 aa18.54■□□□□ 0.56
HPS4-216ENST00000493455 EEF2P13639 858 aaKnown RBP18.54■□□□□ 0.56
HPS4-216ENST00000493455 ANAPC15P60006 121 aa18.54■□□□□ 0.56
HPS4-216ENST00000493455 SART3Q15020 963 aaKnown RBP18.54■□□□□ 0.56
HPS4-216ENST00000493455 TBC1D32Q96NH3 1257 aa18.54■□□□□ 0.56
HPS4-216ENST00000493455 ZSCAN10Q96SZ4 725 aaPredicted RBP18.54■□□□□ 0.56
HPS4-216ENST00000493455 KANSL2Q9H9L4 492 aa18.54■□□□□ 0.56
HPS4-216ENST00000493455 ARHGEF10LQ9HCE6 1279 aa18.54■□□□□ 0.56
HPS4-216ENST00000493455 IL17RBQ9NRM6 502 aa18.54■□□□□ 0.56
HPS4-216ENST00000493455 CREBZFQ9NS37 354 aa18.54■□□□□ 0.56
HPS4-216ENST00000493455 CLIP2Q9UDT6 1046 aa18.54■□□□□ 0.56
HPS4-216ENST00000493455 CYP46A1Q9Y6A2 500 aa18.54■□□□□ 0.56
HPS4-216ENST00000493455 PLIN4Q96Q06 1357 aa18.54■□□□□ 0.56
HPS4-216ENST00000493455 SPDYE5A6NIY4 337 aa18.53■□□□□ 0.56
HPS4-216ENST00000493455 ECE1P42892 770 aa18.53■□□□□ 0.56
HPS4-216ENST00000493455 RBM25P49756 843 aaKnown RBP18.53■□□□□ 0.56
HPS4-216ENST00000493455 C1QTNF8P60827 252 aa18.53■□□□□ 0.56
HPS4-216ENST00000493455 SPP2Q13103 211 aa18.53■□□□□ 0.56
HPS4-216ENST00000493455 TMEM67Q5HYA8 995 aa18.53■□□□□ 0.56
HPS4-216ENST00000493455 DHX32Q7L7V1 743 aaKnown RBP18.53■□□□□ 0.56
HPS4-216ENST00000493455 ERO1BQ86YB8 467 aa18.53■□□□□ 0.56
HPS4-216ENST00000493455 LRRC47Q8N1G4 583 aaKnown RBP18.53■□□□□ 0.56
HPS4-216ENST00000493455 ACER1Q8TDN7 264 aa18.53■□□□□ 0.56
HPS4-216ENST00000493455 WNK4Q96J92 1243 aa18.53■□□□□ 0.56
HPS4-216ENST00000493455 GPHNQ9NQX3 736 aaPredicted RBP18.53■□□□□ 0.56
HPS4-216ENST00000493455 GINM1Q9NU53 330 aa18.53■□□□□ 0.56
HPS4-216ENST00000493455 ISY1Q9ULR0 285 aaKnown RBP18.53■□□□□ 0.56
HPS4-216ENST00000493455 IGKV6D-41A0A0C4DH26 115 aa18.52■□□□□ 0.56
HPS4-216ENST00000493455 TTLL1O95922 423 aa18.52■□□□□ 0.56
HPS4-216ENST00000493455 HMGB1P09429 215 aaKnown RBP18.52■□□□□ 0.56
HPS4-216ENST00000493455 RPS6KB1P23443 525 aa18.52■□□□□ 0.56
HPS4-216ENST00000493455 MTMR2Q13614 643 aa18.52■□□□□ 0.56
HPS4-216ENST00000493455 WTAPQ15007 396 aa18.52■□□□□ 0.56
HPS4-216ENST00000493455 CYP4F22Q6NT55 531 aa18.52■□□□□ 0.56
HPS4-216ENST00000493455 NFXL1Q6ZNB6 911 aa18.52■□□□□ 0.56
HPS4-216ENST00000493455 NOL8Q76FK4 1167 aaKnown RBP18.52■□□□□ 0.56
HPS4-216ENST00000493455 RUFY3Q7L099 469 aa18.52■□□□□ 0.56
HPS4-216ENST00000493455 RASAL3Q86YV0 1011 aa18.52■□□□□ 0.56
HPS4-216ENST00000493455 MTMR4Q9NYA4 1195 aa18.52■□□□□ 0.56
HPS4-216ENST00000493455 NAP1L2Q9ULW6 460 aaPredicted RBP18.52■□□□□ 0.56
HPS4-216ENST00000493455 PTPRFP10586 1907 aa18.52■□□□□ 0.56
HPS4-216ENST00000493455 IRF6O14896 467 aa18.51■□□□□ 0.55
HPS4-216ENST00000493455 GJA5P36382 358 aa18.51■□□□□ 0.55
HPS4-216ENST00000493455 PPATQ06203 517 aa18.51■□□□□ 0.55
HPS4-216ENST00000493455 DGKZQ13574 1117 aa18.51■□□□□ 0.55
HPS4-216ENST00000493455 DEFB115Q30KQ5 88 aa18.51■□□□□ 0.55
HPS4-216ENST00000493455 IFIT1BQ5T764 474 aaKnown RBP18.51■□□□□ 0.55
HPS4-216ENST00000493455 Q6ZUG5 572 aa18.51■□□□□ 0.55
HPS4-216ENST00000493455 ENAHQ8N8S7 591 aaPredicted RBP18.51■□□□□ 0.55
HPS4-216ENST00000493455 ZNF280CQ8ND82 737 aa18.51■□□□□ 0.55
HPS4-216ENST00000493455 PDRG1Q9NUG6 133 aa18.51■□□□□ 0.55
HPS4-216ENST00000493455 A0A1W2PRG0 241 aa18.5■□□□□ 0.55
HPS4-216ENST00000493455 UNCXA6NJT0 531 aa18.5■□□□□ 0.55
HPS4-216ENST00000493455 NEK4P51957 841 aa18.5■□□□□ 0.55
HPS4-216ENST00000493455 PPIL2Q13356 520 aa18.5■□□□□ 0.55
HPS4-216ENST00000493455 CCDC178Q5BJE1 867 aa18.5■□□□□ 0.55
HPS4-216ENST00000493455 TM6SF1Q9BZW5 370 aa18.5■□□□□ 0.55
HPS4-216ENST00000493455 KAT14Q9H8E8 782 aa18.5■□□□□ 0.55
HPS4-216ENST00000493455 SENP2Q9HC62 589 aa18.5■□□□□ 0.55
HPS4-216ENST00000493455 ZSWIM6Q9HCJ5 1215 aa18.5■□□□□ 0.55
HPS4-216ENST00000493455 TCP11L1Q9NUJ3 509 aa18.5■□□□□ 0.55
HPS4-216ENST00000493455 USP17L10C9JJH3 530 aa18.49■□□□□ 0.55
HPS4-216ENST00000493455 SH2B2O14492 632 aaPredicted RBP18.49■□□□□ 0.55
HPS4-216ENST00000493455 SLC10A3P09131 477 aa18.49■□□□□ 0.55
HPS4-216ENST00000493455 NT5C2P49902 561 aa18.49■□□□□ 0.55
HPS4-216ENST00000493455 HMGCS2P54868 508 aa18.49■□□□□ 0.55
HPS4-216ENST00000493455 EXOSC10Q01780 885 aaKnown RBP18.49■□□□□ 0.55
HPS4-216ENST00000493455 SPRYD7Q5W111 196 aa18.49■□□□□ 0.55
HPS4-216ENST00000493455 GADL1Q6ZQY3 521 aa18.49■□□□□ 0.55
HPS4-216ENST00000493455 RAB11FIP4Q86YS3 637 aa18.49■□□□□ 0.55
HPS4-216ENST00000493455 SPICE1Q8N0Z3 855 aa18.49■□□□□ 0.55
HPS4-216ENST00000493455 TMEM87BQ96K49 555 aa18.49■□□□□ 0.55
HPS4-216ENST00000493455 KIF2CQ99661 725 aa18.49■□□□□ 0.55
HPS4-216ENST00000493455 TMEM47Q9BQJ4 181 aa18.49■□□□□ 0.55
HPS4-216ENST00000493455 LARP6Q9BRS8 491 aaKnown RBP18.49■□□□□ 0.55
HPS4-216ENST00000493455 SH2D4AQ9H788 454 aa18.49■□□□□ 0.55
HPS4-216ENST00000493455 NYAP2Q9P242 653 aa18.49■□□□□ 0.55
HPS4-216ENST00000493455 AFG3L2Q9Y4W6 797 aa18.49■□□□□ 0.55
HPS4-216ENST00000493455 CCDC69A6NI79 296 aa18.48■□□□□ 0.55
HPS4-216ENST00000493455 HSPA6P17066 643 aa18.48■□□□□ 0.55
HPS4-216ENST00000493455 SEC23AQ15436 765 aa18.48■□□□□ 0.55
HPS4-216ENST00000493455 PPP4R3BQ5MIZ7 849 aa18.48■□□□□ 0.55
HPS4-216ENST00000493455 RCSD1Q6JBY9 416 aa18.48■□□□□ 0.55
HPS4-216ENST00000493455 SIAH1Q8IUQ4 282 aa18.48■□□□□ 0.55
HPS4-216ENST00000493455 BRF1Q92994 677 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms