RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 PRPF40AO75400 957 aaKnown RBP7.41□□□□□ -1.22
SF3A3-208ENST00000489537 IL1R1P14778 569 aa7.41□□□□□ -1.22
SF3A3-208ENST00000489537 PDIA3P30101 505 aaKnown RBP7.41□□□□□ -1.22
SF3A3-208ENST00000489537 GYG1P46976 350 aa7.41□□□□□ -1.22
SF3A3-208ENST00000489537 METAP2P50579 478 aaKnown RBP eCLIP7.41□□□□□ -1.22
SF3A3-208ENST00000489537 ZNF445P59923 1031 aa7.41□□□□□ -1.22
SF3A3-208ENST00000489537 SPRYD7Q5W111 196 aa7.41□□□□□ -1.22
SF3A3-208ENST00000489537 ZNF598Q86UK7 904 aaKnown RBP7.41□□□□□ -1.22
SF3A3-208ENST00000489537 C2CD5Q86YS7 1000 aa7.41□□□□□ -1.22
SF3A3-208ENST00000489537 DNAJC5GQ8N7S2 189 aa7.41□□□□□ -1.22
SF3A3-208ENST00000489537 SUPT20HQ8NEM7 779 aa7.41□□□□□ -1.22
SF3A3-208ENST00000489537 CNKSR1Q969H4 720 aa7.41□□□□□ -1.22
SF3A3-208ENST00000489537 MASTLQ96GX5 879 aa7.41□□□□□ -1.22
SF3A3-208ENST00000489537 COA1Q9GZY4 146 aa7.41□□□□□ -1.22
SF3A3-208ENST00000489537 RBM28Q9NW13 759 aaKnown RBP7.41□□□□□ -1.22
SF3A3-208ENST00000489537 ZDHHC9Q9Y397 364 aa7.41□□□□□ -1.22
SF3A3-208ENST00000489537 ATP6V0A2Q9Y487 856 aa7.41□□□□□ -1.22
SF3A3-208ENST00000489537 SLC12A7Q9Y666 1083 aa7.41□□□□□ -1.22
SF3A3-208ENST00000489537 KLF18A0A0U1RQI7 1052 aa7.4□□□□□ -1.22
SF3A3-208ENST00000489537 GOLGA8BA8MQT2 603 aa7.4□□□□□ -1.22
SF3A3-208ENST00000489537 PPEF1O14829 653 aaPredicted RBP7.4□□□□□ -1.22
SF3A3-208ENST00000489537 IFIT3O14879 490 aaKnown RBP7.4□□□□□ -1.22
SF3A3-208ENST00000489537 ZBTB43O43298 467 aa7.4□□□□□ -1.22
SF3A3-208ENST00000489537 ORC4O43929 436 aa7.4□□□□□ -1.22
SF3A3-208ENST00000489537 UFL1O94874 794 aa7.4□□□□□ -1.22
SF3A3-208ENST00000489537 FMNL1O95466 1100 aaPredicted RBP7.4□□□□□ -1.22
SF3A3-208ENST00000489537 FGRP09769 529 aa7.4□□□□□ -1.22
SF3A3-208ENST00000489537 HSPA6P17066 643 aa7.4□□□□□ -1.22
SF3A3-208ENST00000489537 GNAQP50148 359 aa7.4□□□□□ -1.22
SF3A3-208ENST00000489537 MMP14P50281 582 aa7.4□□□□□ -1.22
SF3A3-208ENST00000489537 FKBP1AP62942 108 aaKnown RBP7.4□□□□□ -1.22
SF3A3-208ENST00000489537 AKAP17AQ02040 695 aaKnown RBP7.4□□□□□ -1.22
SF3A3-208ENST00000489537 PPARAQ07869 468 aa7.4□□□□□ -1.22
SF3A3-208ENST00000489537 WTAPQ15007 396 aa7.4□□□□□ -1.22
SF3A3-208ENST00000489537 SAFBQ15424 915 aaKnown RBP eCLIP7.4□□□□□ -1.22
SF3A3-208ENST00000489537 TMEM67Q5HYA8 995 aa7.4□□□□□ -1.22
SF3A3-208ENST00000489537 STYK1Q6J9G0 422 aa7.4□□□□□ -1.22
SF3A3-208ENST00000489537 PI16Q6UXB8 463 aa7.4□□□□□ -1.22
SF3A3-208ENST00000489537 JMYQ8N9B5 988 aa7.4□□□□□ -1.22
SF3A3-208ENST00000489537 NSUN4Q96CB9 384 aaKnown RBP7.4□□□□□ -1.22
SF3A3-208ENST00000489537 CCDC34Q96HJ3 373 aa7.4□□□□□ -1.22
SF3A3-208ENST00000489537 MRIQ9BWK5 157 aa7.4□□□□□ -1.22
SF3A3-208ENST00000489537 ZC3H12CQ9C0D7 883 aaKnown RBP7.4□□□□□ -1.22
SF3A3-208ENST00000489537 VPS33BQ9H267 617 aa7.4□□□□□ -1.22
SF3A3-208ENST00000489537 RNF181Q9P0P0 153 aa7.4□□□□□ -1.22
SF3A3-208ENST00000489537 NAP1L2Q9ULW6 460 aaPredicted RBP7.4□□□□□ -1.22
SF3A3-208ENST00000489537 NSFL1CQ9UNZ2 370 aaKnown RBP7.4□□□□□ -1.22
SF3A3-208ENST00000489537 MTMR6Q9Y217 621 aa7.4□□□□□ -1.22
SF3A3-208ENST00000489537 STK36Q9NRP7 1315 aa7.4□□□□□ -1.22
SF3A3-208ENST00000489537 NID2Q14112 1375 aa7.4□□□□□ -1.22
SF3A3-208ENST00000489537 MYH7P12883 1935 aa7.39□□□□□ -1.23
SF3A3-208ENST00000489537 CCDC88AQ3V6T2 1871 aa7.39□□□□□ -1.23
SF3A3-208ENST00000489537 FAM205AQ6ZU69 1335 aa7.39□□□□□ -1.23
SF3A3-208ENST00000489537 PTPDC1A2A3K4 754 aa7.39□□□□□ -1.23
SF3A3-208ENST00000489537 H0YIN7 160 aa7.39□□□□□ -1.23
SF3A3-208ENST00000489537 SH2B2O14492 632 aaPredicted RBP7.39□□□□□ -1.23
SF3A3-208ENST00000489537 CTAGE5O15320 804 aa7.39□□□□□ -1.23
SF3A3-208ENST00000489537 SRGNP10124 158 aa7.39□□□□□ -1.23
SF3A3-208ENST00000489537 CPA1P15085 419 aa7.39□□□□□ -1.23
SF3A3-208ENST00000489537 KIF5BP33176 963 aa7.39□□□□□ -1.23
SF3A3-208ENST00000489537 APOBRQ0VD83 1088 aa7.39□□□□□ -1.23
SF3A3-208ENST00000489537 FUT2Q10981 343 aa7.39□□□□□ -1.23
SF3A3-208ENST00000489537 SCRN1Q12765 414 aa7.39□□□□□ -1.23
SF3A3-208ENST00000489537 PKDCCQ504Y2 493 aa7.39□□□□□ -1.23
SF3A3-208ENST00000489537 CCDC183Q5T5S1 534 aa7.39□□□□□ -1.23
SF3A3-208ENST00000489537 ZNF697Q5TEC3 545 aa7.39□□□□□ -1.23
SF3A3-208ENST00000489537 SOGA3Q5TF21 947 aa7.39□□□□□ -1.23
SF3A3-208ENST00000489537 STOX1Q6ZVD7 989 aa7.39□□□□□ -1.23
SF3A3-208ENST00000489537 PODNQ7Z5L7 613 aa7.39□□□□□ -1.23
SF3A3-208ENST00000489537 CATIPQ7Z7H3 387 aa7.39□□□□□ -1.23
SF3A3-208ENST00000489537 MPNDQ8N594 471 aa7.39□□□□□ -1.23
SF3A3-208ENST00000489537 NSUN7Q8NE18 718 aaKnown RBP7.39□□□□□ -1.23
SF3A3-208ENST00000489537 C8orf76Q96K31 380 aa7.39□□□□□ -1.23
SF3A3-208ENST00000489537 MAP3K14Q99558 947 aa7.39□□□□□ -1.23
SF3A3-208ENST00000489537 RIOK1Q9BRS2 568 aaKnown RBP7.39□□□□□ -1.23
SF3A3-208ENST00000489537 ARMT1Q9H993 441 aa7.39□□□□□ -1.23
SF3A3-208ENST00000489537 RRAGCQ9HB90 399 aa7.39□□□□□ -1.23
SF3A3-208ENST00000489537 BRMS1Q9HCU9 246 aa7.39□□□□□ -1.23
SF3A3-208ENST00000489537 TOMM22Q9NS69 142 aa7.39□□□□□ -1.23
SF3A3-208ENST00000489537 DDX19AQ9NUU7 478 aaKnown RBP7.39□□□□□ -1.23
SF3A3-208ENST00000489537 AKAP11Q9UKA4 1901 aa7.39□□□□□ -1.23
SF3A3-208ENST00000489537 TNRC6CQ9HCJ0 1690 aaKnown RBP7.38□□□□□ -1.23
SF3A3-208ENST00000489537 FSD2A1L4K1 749 aa7.38□□□□□ -1.23
SF3A3-208ENST00000489537 GOLGA8AA7E2F4 631 aa7.38□□□□□ -1.23
SF3A3-208ENST00000489537 C6orf229H3BNL8 230 aa7.38□□□□□ -1.23
SF3A3-208ENST00000489537 FOXP2O15409 715 aa7.38□□□□□ -1.23
SF3A3-208ENST00000489537 C21orf2O43822 256 aa7.38□□□□□ -1.23
SF3A3-208ENST00000489537 KDM4AO75164 1064 aa7.38□□□□□ -1.23
SF3A3-208ENST00000489537 DDAH1O94760 285 aa7.38□□□□□ -1.23
SF3A3-208ENST00000489537 DEXIO95424 95 aa7.38□□□□□ -1.23
SF3A3-208ENST00000489537 BMP15O95972 392 aa7.38□□□□□ -1.23
SF3A3-208ENST00000489537 IFNAR1P17181 557 aa7.38□□□□□ -1.23
SF3A3-208ENST00000489537 IARSP41252 1262 aaKnown RBP7.38□□□□□ -1.23
SF3A3-208ENST00000489537 USP5P45974 858 aa7.38□□□□□ -1.23
SF3A3-208ENST00000489537 GCGRP47871 477 aa7.38□□□□□ -1.23
SF3A3-208ENST00000489537 HAND2P61296 217 aa7.38□□□□□ -1.23
SF3A3-208ENST00000489537 HDLBPQ00341 1268 aaKnown RBP7.38□□□□□ -1.23
SF3A3-208ENST00000489537 MECOMQ03112 1051 aa7.38□□□□□ -1.23
SF3A3-208ENST00000489537 SSRP1Q08945 709 aaKnown RBP7.38□□□□□ -1.23
SF3A3-208ENST00000489537 MAP2K5Q13163 448 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms