RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 TXNRD2Q9NNW7 524 aa16.87■□□□□ 0.29
VTI1A-206ENST00000489142 BIN2Q9UBW5 565 aaPredicted RBP16.87■□□□□ 0.29
VTI1A-206ENST00000489142 M0R2C6 588 aa16.86■□□□□ 0.29
VTI1A-206ENST00000489142 RNF113AO15541 343 aaKnown RBP16.86■□□□□ 0.29
VTI1A-206ENST00000489142 AKR1B1P15121 316 aa16.86■□□□□ 0.29
VTI1A-206ENST00000489142 HOXA7P31268 230 aaPredicted RBP16.86■□□□□ 0.29
VTI1A-206ENST00000489142 ANKRD45Q5TZF3 282 aa16.86■□□□□ 0.29
VTI1A-206ENST00000489142 C12orf60Q5U649 245 aa16.86■□□□□ 0.29
VTI1A-206ENST00000489142 POTEEQ6S8J3 1075 aa16.86■□□□□ 0.29
VTI1A-206ENST00000489142 STK11IPQ8N1F8 1099 aa16.86■□□□□ 0.29
VTI1A-206ENST00000489142 PAGR1Q9BTK6 254 aa16.86■□□□□ 0.29
VTI1A-206ENST00000489142 A0A1W2PRG0 241 aa16.85■□□□□ 0.29
VTI1A-206ENST00000489142 ADCY3O60266 1144 aa16.85■□□□□ 0.29
VTI1A-206ENST00000489142 MX1P20591 662 aa16.85■□□□□ 0.29
VTI1A-206ENST00000489142 CTR9Q6PD62 1173 aa16.85■□□□□ 0.29
VTI1A-206ENST00000489142 COA7Q96BR5 231 aa16.85■□□□□ 0.29
VTI1A-206ENST00000489142 STRBPQ96SI9 672 aaKnown RBP16.85■□□□□ 0.29
VTI1A-206ENST00000489142 TTC41PQ6P2S7 1318 aa16.85■□□□□ 0.29
VTI1A-206ENST00000489142 ERC2O15083 957 aa16.84■□□□□ 0.29
VTI1A-206ENST00000489142 CCL5P13501 91 aa16.84■□□□□ 0.29
VTI1A-206ENST00000489142 VCAM1P19320 739 aa16.84■□□□□ 0.29
VTI1A-206ENST00000489142 CDK8P49336 464 aa16.84■□□□□ 0.29
VTI1A-206ENST00000489142 AMOTL1Q8IY63 956 aa16.84■□□□□ 0.29
VTI1A-206ENST00000489142 SLAIN1Q8ND83 568 aa16.84■□□□□ 0.29
VTI1A-206ENST00000489142 EXOC6Q8TAG9 804 aa16.84■□□□□ 0.29
VTI1A-206ENST00000489142 APPBP2Q92624 585 aa16.84■□□□□ 0.29
VTI1A-206ENST00000489142 DDRGK1Q96HY6 314 aa16.84■□□□□ 0.29
VTI1A-206ENST00000489142 SEC62Q99442 399 aaKnown RBP16.84■□□□□ 0.29
VTI1A-206ENST00000489142 FSD1Q9BTV5 496 aa16.84■□□□□ 0.29
VTI1A-206ENST00000489142 KIAA1683Q9H0B3 1180 aa16.84■□□□□ 0.29
VTI1A-206ENST00000489142 RBPJLQ9UBG7 517 aa16.84■□□□□ 0.29
VTI1A-206ENST00000489142 MORF4L1Q9UBU8 362 aa16.84■□□□□ 0.29
VTI1A-206ENST00000489142 SWAP70Q9UH65 585 aa16.84■□□□□ 0.29
VTI1A-206ENST00000489142 GSG1L2A8MUP6 293 aa16.83■□□□□ 0.28
VTI1A-206ENST00000489142 GPAA1O43292 621 aa16.83■□□□□ 0.28
VTI1A-206ENST00000489142 GLRX3O76003 335 aaKnown RBP16.83■□□□□ 0.28
VTI1A-206ENST00000489142 USP14P54578 494 aa16.83■□□□□ 0.28
VTI1A-206ENST00000489142 Q3C1V9 767 aa16.83■□□□□ 0.28
VTI1A-206ENST00000489142 C12orf42Q96LP6 360 aa16.83■□□□□ 0.28
VTI1A-206ENST00000489142 SALL3Q9BXA9 1300 aa16.83■□□□□ 0.28
VTI1A-206ENST00000489142 UNC93B1Q9H1C4 597 aa16.83■□□□□ 0.28
VTI1A-206ENST00000489142 RPAP3Q9H6T3 665 aaPredicted RBP16.83■□□□□ 0.28
VTI1A-206ENST00000489142 ZBTB47Q9UFB7 747 aaPredicted RBP16.83■□□□□ 0.28
VTI1A-206ENST00000489142 USP17L15C9J2P7 530 aa16.82■□□□□ 0.28
VTI1A-206ENST00000489142 USP17L13C9JLJ4 530 aa16.82■□□□□ 0.28
VTI1A-206ENST00000489142 USP17L11C9JVI0 530 aa16.82■□□□□ 0.28
VTI1A-206ENST00000489142 USP17L18D6R9N7 530 aa16.82■□□□□ 0.28
VTI1A-206ENST00000489142 USP17L22D6RA61 530 aa16.82■□□□□ 0.28
VTI1A-206ENST00000489142 USP17L17D6RBQ6 530 aa16.82■□□□□ 0.28
VTI1A-206ENST00000489142 USP17L19D6RCP7 530 aa16.82■□□□□ 0.28
VTI1A-206ENST00000489142 USP17L20D6RJB6 530 aa16.82■□□□□ 0.28
VTI1A-206ENST00000489142 INHAP05111 366 aa16.82■□□□□ 0.28
VTI1A-206ENST00000489142 ERVK-9P63128 1117 aa16.82■□□□□ 0.28
VTI1A-206ENST00000489142 ERVK-24P63145 666 aa16.82■□□□□ 0.28
VTI1A-206ENST00000489142 USP17L24Q0WX57 530 aa16.82■□□□□ 0.28
VTI1A-206ENST00000489142 HDAC1Q13547 482 aaPredicted RBP16.82■□□□□ 0.28
VTI1A-206ENST00000489142 KIAA1755Q5JYT7 1200 aa16.82■□□□□ 0.28
VTI1A-206ENST00000489142 TMEM179Q6ZVK1 233 aa16.82■□□□□ 0.28
VTI1A-206ENST00000489142 C16orf86Q6ZW13 317 aa16.82■□□□□ 0.28
VTI1A-206ENST00000489142 GPRC5AQ8NFJ5 357 aa16.82■□□□□ 0.28
VTI1A-206ENST00000489142 SHISA4Q96DD7 197 aa16.82■□□□□ 0.28
VTI1A-206ENST00000489142 RNF208Q9H0X6 261 aa16.82■□□□□ 0.28
VTI1A-206ENST00000489142 PORCNQ9H237 461 aa16.82■□□□□ 0.28
VTI1A-206ENST00000489142 EPB41L4AQ9HCS5 686 aaPredicted RBP16.82■□□□□ 0.28
VTI1A-206ENST00000489142 RLFQ13129 1914 aa16.81■□□□□ 0.28
VTI1A-206ENST00000489142 MINDY4BA8MYZ0 360 aa16.81■□□□□ 0.28
VTI1A-206ENST00000489142 CNMDO75829 334 aa16.81■□□□□ 0.28
VTI1A-206ENST00000489142 UBXN2AP68543 259 aa16.81■□□□□ 0.28
VTI1A-206ENST00000489142 ICA1Q05084 483 aa16.81■□□□□ 0.28
VTI1A-206ENST00000489142 B4GALNT3Q6L9W6 998 aa16.81■□□□□ 0.28
VTI1A-206ENST00000489142 CATSPERGQ6ZRH7 1159 aa16.81■□□□□ 0.28
VTI1A-206ENST00000489142 SIAH1Q8IUQ4 282 aa16.81■□□□□ 0.28
VTI1A-206ENST00000489142 GCC1Q96CN9 775 aa16.81■□□□□ 0.28
VTI1A-206ENST00000489142 ARPP21Q9UBL0 812 aaPredicted RBP16.81■□□□□ 0.28
VTI1A-206ENST00000489142 PARP14Q460N5 1801 aa16.81■□□□□ 0.28
VTI1A-206ENST00000489142 GREB1LQ9C091 1923 aaPredicted RBP16.8■□□□□ 0.28
VTI1A-206ENST00000489142 APPP05067 770 aa16.8■□□□□ 0.28
VTI1A-206ENST00000489142 ZFYP08048 801 aaPredicted RBP16.8■□□□□ 0.28
VTI1A-206ENST00000489142 ATP2B2Q01814 1243 aa16.8■□□□□ 0.28
VTI1A-206ENST00000489142 TRIM32Q13049 653 aa16.8■□□□□ 0.28
VTI1A-206ENST00000489142 IRF5Q13568 498 aa16.8■□□□□ 0.28
VTI1A-206ENST00000489142 SPICE1Q8N0Z3 855 aa16.8■□□□□ 0.28
VTI1A-206ENST00000489142 TANGO6Q9C0B7 1094 aa16.8■□□□□ 0.28
VTI1A-206ENST00000489142 LNPKQ9C0E8 428 aa16.8■□□□□ 0.28
VTI1A-206ENST00000489142 GJD2Q9UKL4 321 aa16.8■□□□□ 0.28
VTI1A-206ENST00000489142 CYP2B6P20813 491 aa16.79■□□□□ 0.28
VTI1A-206ENST00000489142 TDO2P48775 406 aa16.79■□□□□ 0.28
VTI1A-206ENST00000489142 SAMD1Q6SPF0 538 aaPredicted RBP16.79■□□□□ 0.28
VTI1A-206ENST00000489142 CCDC129Q6ZRS4 1044 aa16.79■□□□□ 0.28
VTI1A-206ENST00000489142 CCAR1Q8IX12 1150 aaKnown RBP16.79■□□□□ 0.28
VTI1A-206ENST00000489142 BTBD7Q9P203 1132 aa16.79■□□□□ 0.28
VTI1A-206ENST00000489142 SUPT16HQ9Y5B9 1047 aaKnown RBP16.79■□□□□ 0.28
VTI1A-206ENST00000489142 COL11A1P12107 1806 aaPredicted RBP16.79■□□□□ 0.28
VTI1A-206ENST00000489142 A0A0G2JMZ2 1700 aa16.79■□□□□ 0.28
VTI1A-206ENST00000489142 MYH4Q9Y623 1939 aa16.78■□□□□ 0.28
VTI1A-206ENST00000489142 SPDYE16A6NNV3 312 aaPredicted RBP16.78■□□□□ 0.28
VTI1A-206ENST00000489142 IGHDP01880 384 aa16.78■□□□□ 0.28
VTI1A-206ENST00000489142 EEF2P13639 858 aaKnown RBP16.78■□□□□ 0.28
VTI1A-206ENST00000489142 PDE1AP54750 535 aa16.78■□□□□ 0.28
VTI1A-206ENST00000489142 WDR78Q5VTH9 848 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms