RNA–Protein interactions for RNA: ENST00000487445.6

GCA-210, Transcript of grancalcin, humanhuman

TSL 5

Gene GCA, Length 1,808 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-210ENST00000487445 CDK5RAP2Q96SN8 1893 aa16.96■□□□□ 0.31
GCA-210ENST00000487445 LAMB1P07942 1786 aa16.96■□□□□ 0.31
GCA-210ENST00000487445 DHX16O60231 1041 aaKnown RBP16.96■□□□□ 0.3
GCA-210ENST00000487445 TBC1D12O60347 775 aa16.96■□□□□ 0.3
GCA-210ENST00000487445 ADD1P35611 737 aaKnown RBP16.96■□□□□ 0.3
GCA-210ENST00000487445 RRP1BQ14684 758 aaKnown RBP16.96■□□□□ 0.3
GCA-210ENST00000487445 RAB3GAP1Q15042 981 aa16.96■□□□□ 0.3
GCA-210ENST00000487445 TMEM47Q9BQJ4 181 aa16.96■□□□□ 0.3
GCA-210ENST00000487445 TAF1DQ9H5J8 278 aaPredicted RBP16.96■□□□□ 0.3
GCA-210ENST00000487445 CABP5Q9NP86 173 aa16.96■□□□□ 0.3
GCA-210ENST00000487445 MTMR4Q9NYA4 1195 aa16.96■□□□□ 0.3
GCA-210ENST00000487445 CLIP2Q9UDT6 1046 aa16.96■□□□□ 0.3
GCA-210ENST00000487445 MYH1P12882 1939 aa16.95■□□□□ 0.3
GCA-210ENST00000487445 JAK2O60674 1132 aa16.95■□□□□ 0.3
GCA-210ENST00000487445 GH2P01242 217 aa16.95■□□□□ 0.3
GCA-210ENST00000487445 GJB2P29033 226 aa16.95■□□□□ 0.3
GCA-210ENST00000487445 CDC27P30260 824 aa16.95■□□□□ 0.3
GCA-210ENST00000487445 SULF1Q8IWU6 871 aa16.95■□□□□ 0.3
GCA-210ENST00000487445 PNMA1Q8ND90 353 aa16.95■□□□□ 0.3
GCA-210ENST00000487445 DDX11Q96FC9 970 aa16.95■□□□□ 0.3
GCA-210ENST00000487445 POTECB2RU33 542 aa16.94■□□□□ 0.3
GCA-210ENST00000487445 SEPT2Q15019 361 aa16.94■□□□□ 0.3
GCA-210ENST00000487445 DLK2Q6UY11 383 aa16.94■□□□□ 0.3
GCA-210ENST00000487445 FANCBQ8NB91 859 aa16.94■□□□□ 0.3
GCA-210ENST00000487445 ANKS1AQ92625 1134 aa16.94■□□□□ 0.3
GCA-210ENST00000487445 FOCADQ5VW36 1801 aa16.94■□□□□ 0.3
GCA-210ENST00000487445 IGKV6D-41A0A0C4DH26 115 aa16.93■□□□□ 0.3
GCA-210ENST00000487445 CTDNEP1O95476 244 aa16.93■□□□□ 0.3
GCA-210ENST00000487445 TTLL1O95922 423 aa16.93■□□□□ 0.3
GCA-210ENST00000487445 JAG1P78504 1218 aa16.93■□□□□ 0.3
GCA-210ENST00000487445 TROAPQ12815 778 aa16.93■□□□□ 0.3
GCA-210ENST00000487445 RTN1Q16799 776 aa16.93■□□□□ 0.3
GCA-210ENST00000487445 TMEM179Q6ZVK1 233 aa16.93■□□□□ 0.3
GCA-210ENST00000487445 KRT26Q7Z3Y9 468 aa16.93■□□□□ 0.3
GCA-210ENST00000487445 PIAS4Q8N2W9 510 aaPredicted RBP16.93■□□□□ 0.3
GCA-210ENST00000487445 PITPNM2Q9BZ72 1349 aa16.93■□□□□ 0.3
GCA-210ENST00000487445 ECM29Q5VYK3 1845 aa16.93■□□□□ 0.3
GCA-210ENST00000487445 PTPDC1A2A3K4 754 aa16.93■□□□□ 0.3
GCA-210ENST00000487445 ADM5C9JUS6 153 aa16.93■□□□□ 0.3
GCA-210ENST00000487445 DDAH1O94760 285 aa16.93■□□□□ 0.3
GCA-210ENST00000487445 CALM1P0DP23 149 aa16.93■□□□□ 0.3
GCA-210ENST00000487445 CALM2P0DP24 149 aa16.93■□□□□ 0.3
GCA-210ENST00000487445 CALM3P0DP25 149 aa16.93■□□□□ 0.3
GCA-210ENST00000487445 TOP1P11387 765 aaKnown RBP16.93■□□□□ 0.3
GCA-210ENST00000487445 CPLX2Q6PUV4 134 aaKnown RBP16.93■□□□□ 0.3
GCA-210ENST00000487445 LRRC47Q8N1G4 583 aaKnown RBP16.93■□□□□ 0.3
GCA-210ENST00000487445 CCDC82Q8N4S0 544 aa16.93■□□□□ 0.3
GCA-210ENST00000487445 NSUN7Q8NE18 718 aaKnown RBP16.93■□□□□ 0.3
GCA-210ENST00000487445 KANSL2Q9H9L4 492 aa16.93■□□□□ 0.3
GCA-210ENST00000487445 FAM217BQ9NTX9 383 aaPredicted RBP16.93■□□□□ 0.3
GCA-210ENST00000487445 CHMP5Q9NZZ3 219 aa16.93■□□□□ 0.3
GCA-210ENST00000487445 CLEC11AQ9Y240 323 aa16.93■□□□□ 0.3
GCA-210ENST00000487445 PPP2R3BQ9Y5P8 575 aa16.93■□□□□ 0.3
GCA-210ENST00000487445 PLIN4Q96Q06 1357 aa16.93■□□□□ 0.3
GCA-210ENST00000487445 RAD21O60216 631 aa16.92■□□□□ 0.3
GCA-210ENST00000487445 DDIT3P35638 169 aa16.92■□□□□ 0.3
GCA-210ENST00000487445 MAP3K10Q02779 954 aa16.92■□□□□ 0.3
GCA-210ENST00000487445 ICA1Q05084 483 aa16.92■□□□□ 0.3
GCA-210ENST00000487445 PRKG1Q13976 671 aa16.92■□□□□ 0.3
GCA-210ENST00000487445 DCAF15Q66K64 600 aa16.92■□□□□ 0.3
GCA-210ENST00000487445 PNMA8AQ86V59 439 aaPredicted RBP16.92■□□□□ 0.3
GCA-210ENST00000487445 CMTR1Q8N1G2 835 aaKnown RBP16.92■□□□□ 0.3
GCA-210ENST00000487445 FAM184AQ8NB25 1140 aa16.92■□□□□ 0.3
GCA-210ENST00000487445 CTCFLQ8NI51 663 aaPredicted RBP16.92■□□□□ 0.3
GCA-210ENST00000487445 ZNF526Q8TF50 670 aaPredicted RBP16.92■□□□□ 0.3
GCA-210ENST00000487445 LLPHQ9BRT6 129 aaKnown RBP16.92■□□□□ 0.3
GCA-210ENST00000487445 RRAGCQ9HB90 399 aa16.92■□□□□ 0.3
GCA-210ENST00000487445 FZD1Q9UP38 647 aa16.92■□□□□ 0.3
GCA-210ENST00000487445 CCDC196A0A1B0GTZ2 297 aa16.91■□□□□ 0.3
GCA-210ENST00000487445 EEF2P13639 858 aaKnown RBP16.91■□□□□ 0.3
GCA-210ENST00000487445 GUCY1A2P33402 732 aa16.91■□□□□ 0.3
GCA-210ENST00000487445 CAP2P40123 477 aa16.91■□□□□ 0.3
GCA-210ENST00000487445 RCAN1P53805 252 aa16.91■□□□□ 0.3
GCA-210ENST00000487445 ZC3H15Q8WU90 426 aaKnown RBP16.91■□□□□ 0.3
GCA-210ENST00000487445 HOOK2Q96ED9 719 aa16.91■□□□□ 0.3
GCA-210ENST00000487445 NOVP48745 357 aa16.91■□□□□ 0.3
GCA-210ENST00000487445 SUPT20HL1Q3ZLR7 823 aa16.91■□□□□ 0.3
GCA-210ENST00000487445 PPP4R3BQ5MIZ7 849 aa16.91■□□□□ 0.3
GCA-210ENST00000487445 USP48Q86UV5 1035 aa16.91■□□□□ 0.3
GCA-210ENST00000487445 PHKBQ93100 1093 aa16.91■□□□□ 0.3
GCA-210ENST00000487445 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.91■□□□□ 0.3
GCA-210ENST00000487445 ZBTB21Q9ULJ3 1066 aa16.91■□□□□ 0.3
GCA-210ENST00000487445 PHF20L1A8MW92 1017 aa16.9■□□□□ 0.3
GCA-210ENST00000487445 CDKL5O76039 1030 aa16.9■□□□□ 0.3
GCA-210ENST00000487445 PKP1Q13835 747 aa16.9■□□□□ 0.3
GCA-210ENST00000487445 RASGRP2Q7LDG7 609 aa16.9■□□□□ 0.3
GCA-210ENST00000487445 SMARCC2Q8TAQ2 1214 aa16.9■□□□□ 0.3
GCA-210ENST00000487445 ZNF341Q9BYN7 854 aa16.9■□□□□ 0.3
GCA-210ENST00000487445 POTEIP0CG38 1075 aa16.89■□□□□ 0.29
GCA-210ENST00000487445 POTEJP0CG39 1038 aa16.89■□□□□ 0.29
GCA-210ENST00000487445 VEGFAP15692 232 aaPredicted RBP16.89■□□□□ 0.29
GCA-210ENST00000487445 HMGN5P82970 282 aaKnown RBP16.89■□□□□ 0.29
GCA-210ENST00000487445 PPP2R5BQ15173 497 aa16.89■□□□□ 0.29
GCA-210ENST00000487445 FOXD4L5Q5VV16 416 aaPredicted RBP16.89■□□□□ 0.29
GCA-210ENST00000487445 FOXD4L4Q8WXT5 416 aaPredicted RBP16.89■□□□□ 0.29
GCA-210ENST00000487445 RBM28Q9NW13 759 aaKnown RBP16.89■□□□□ 0.29
GCA-210ENST00000487445 NYAP2Q9P242 653 aa16.89■□□□□ 0.29
GCA-210ENST00000487445 CIZ1Q9ULV3 898 aaPredicted RBP16.89■□□□□ 0.29
GCA-210ENST00000487445 PLEKHA8P1O95397 391 aa16.89■□□□□ 0.29
GCA-210ENST00000487445 GOLGA8HP0CJ92 632 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms