RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 USP17L18D6R9N7 530 aa23.58■■□□□ 1.37
R3HDM1-215ENST00000483021 USP17L22D6RA61 530 aa23.58■■□□□ 1.37
R3HDM1-215ENST00000483021 USP17L17D6RBQ6 530 aa23.58■■□□□ 1.37
R3HDM1-215ENST00000483021 USP17L19D6RCP7 530 aa23.58■■□□□ 1.37
R3HDM1-215ENST00000483021 USP17L20D6RJB6 530 aa23.58■■□□□ 1.37
R3HDM1-215ENST00000483021 SHMT1P34896 483 aa23.58■■□□□ 1.37
R3HDM1-215ENST00000483021 PLCD1P51178 756 aa23.58■■□□□ 1.37
R3HDM1-215ENST00000483021 USP17L24Q0WX57 530 aa23.58■■□□□ 1.37
R3HDM1-215ENST00000483021 HMX1Q9NP08 348 aaPredicted RBP23.58■■□□□ 1.37
R3HDM1-215ENST00000483021 MCM9Q9NXL9 1143 aa23.58■■□□□ 1.37
R3HDM1-215ENST00000483021 RPTORQ8N122 1335 aa23.58■■□□□ 1.36
R3HDM1-215ENST00000483021 RANBP2P49792 3224 aaKnown RBP23.57■■□□□ 1.36
R3HDM1-215ENST00000483021 TCRBV5S4A2TA0A5A2 114 aa23.57■■□□□ 1.36
R3HDM1-215ENST00000483021 XRCC5P13010 732 aaKnown RBP23.57■■□□□ 1.36
R3HDM1-215ENST00000483021 GABPAQ06546 454 aa23.57■■□□□ 1.36
R3HDM1-215ENST00000483021 ZYXQ15942 572 aaKnown RBP23.57■■□□□ 1.36
R3HDM1-215ENST00000483021 TRMT44Q8IYL2 757 aaKnown RBP23.57■■□□□ 1.36
R3HDM1-215ENST00000483021 PAGR1Q9BTK6 254 aa23.57■■□□□ 1.36
R3HDM1-215ENST00000483021 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.57■■□□□ 1.36
R3HDM1-215ENST00000483021 PAG1Q9NWQ8 432 aa23.57■■□□□ 1.36
R3HDM1-215ENST00000483021 ATP5JP18859 108 aa23.56■■□□□ 1.36
R3HDM1-215ENST00000483021 ANKLE1Q8NAG6 615 aa23.56■■□□□ 1.36
R3HDM1-215ENST00000483021 TRIB2Q92519 343 aa23.56■■□□□ 1.36
R3HDM1-215ENST00000483021 BCL11AQ9H165 835 aa23.56■■□□□ 1.36
R3HDM1-215ENST00000483021 RABGAP1Q9Y3P9 1069 aa23.56■■□□□ 1.36
R3HDM1-215ENST00000483021 BAZ2AQ9UIF9 1905 aaKnown RBP23.56■■□□□ 1.36
R3HDM1-215ENST00000483021 VCAM1P19320 739 aa23.55■■□□□ 1.36
R3HDM1-215ENST00000483021 CYP2B6P20813 491 aa23.55■■□□□ 1.36
R3HDM1-215ENST00000483021 CCNA1P78396 465 aa23.55■■□□□ 1.36
R3HDM1-215ENST00000483021 LCORLQ8N3X6 602 aa23.55■■□□□ 1.36
R3HDM1-215ENST00000483021 SDR42E1Q8WUS8 393 aa23.55■■□□□ 1.36
R3HDM1-215ENST00000483021 DCP1AQ9NPI6 582 aaPredicted RBP23.55■■□□□ 1.36
R3HDM1-215ENST00000483021 PEX10O60683 326 aa23.54■■□□□ 1.36
R3HDM1-215ENST00000483021 ADD2P35612 726 aa23.54■■□□□ 1.36
R3HDM1-215ENST00000483021 FXR1P51114 621 aaKnown RBP eCLIP23.54■■□□□ 1.36
R3HDM1-215ENST00000483021 CHRDL2Q6WN34 429 aa23.54■■□□□ 1.36
R3HDM1-215ENST00000483021 CATSPERGQ6ZRH7 1159 aa23.54■■□□□ 1.36
R3HDM1-215ENST00000483021 GPR142Q7Z601 462 aa23.54■■□□□ 1.36
R3HDM1-215ENST00000483021 NECAB2Q7Z6G3 386 aa23.54■■□□□ 1.36
R3HDM1-215ENST00000483021 ACER1Q8TDN7 264 aa23.54■■□□□ 1.36
R3HDM1-215ENST00000483021 EDC3Q96F86 508 aaKnown RBP23.54■■□□□ 1.36
R3HDM1-215ENST00000483021 PORCNQ9H237 461 aa23.54■■□□□ 1.36
R3HDM1-215ENST00000483021 BOLA2Q9H3K6 86 aa23.54■■□□□ 1.36
R3HDM1-215ENST00000483021 CWC22Q9HCG8 908 aaKnown RBP23.54■■□□□ 1.36
R3HDM1-215ENST00000483021 SWAP70Q9UH65 585 aa23.54■■□□□ 1.36
R3HDM1-215ENST00000483021 ALPK3Q96L96 1907 aa23.54■■□□□ 1.36
R3HDM1-215ENST00000483021 ZKSCAN1P17029 563 aaPredicted RBP23.53■■□□□ 1.36
R3HDM1-215ENST00000483021 RGS2P41220 211 aa23.53■■□□□ 1.36
R3HDM1-215ENST00000483021 Q3C1V9 767 aa23.53■■□□□ 1.36
R3HDM1-215ENST00000483021 MAP3K21Q5TCX8 1036 aa23.53■■□□□ 1.36
R3HDM1-215ENST00000483021 LBX2Q6XYB7 198 aa23.53■■□□□ 1.36
R3HDM1-215ENST00000483021 PLEKHH3Q7Z736 793 aa23.53■■□□□ 1.36
R3HDM1-215ENST00000483021 HAUS7Q99871 368 aa23.53■■□□□ 1.36
R3HDM1-215ENST00000483021 LRRCC1Q9C099 1032 aa23.53■■□□□ 1.36
R3HDM1-215ENST00000483021 ATP8A2Q9NTI2 1148 aa23.53■■□□□ 1.36
R3HDM1-215ENST00000483021 MPHOSPH10O00566 681 aaKnown RBP23.52■■□□□ 1.36
R3HDM1-215ENST00000483021 EVI5O60447 810 aa23.52■■□□□ 1.36
R3HDM1-215ENST00000483021 GLRX3O76003 335 aaKnown RBP23.52■■□□□ 1.36
R3HDM1-215ENST00000483021 GUCY1A2P33402 732 aa23.52■■□□□ 1.36
R3HDM1-215ENST00000483021 TRIM32Q13049 653 aa23.52■■□□□ 1.36
R3HDM1-215ENST00000483021 USP6NLQ92738 828 aa23.52■■□□□ 1.36
R3HDM1-215ENST00000483021 PAWRQ96IZ0 340 aaKnown RBP23.52■■□□□ 1.36
R3HDM1-215ENST00000483021 APBA2Q99767 749 aa23.52■■□□□ 1.36
R3HDM1-215ENST00000483021 ARMT1Q9H993 441 aa23.52■■□□□ 1.36
R3HDM1-215ENST00000483021 MBD4O95243 580 aa23.51■■□□□ 1.35
R3HDM1-215ENST00000483021 PRKAR2AP13861 404 aaKnown RBP23.51■■□□□ 1.35
R3HDM1-215ENST00000483021 SEPT2Q15019 361 aa23.51■■□□□ 1.35
R3HDM1-215ENST00000483021 MORN1Q5T089 497 aa23.51■■□□□ 1.35
R3HDM1-215ENST00000483021 POTEEQ6S8J3 1075 aa23.51■■□□□ 1.35
R3HDM1-215ENST00000483021 TMEM179Q6ZVK1 233 aa23.51■■□□□ 1.35
R3HDM1-215ENST00000483021 AMOTL1Q8IY63 956 aa23.51■■□□□ 1.35
R3HDM1-215ENST00000483021 RPAP3Q9H6T3 665 aaPredicted RBP23.51■■□□□ 1.35
R3HDM1-215ENST00000483021 A0A0G2JMZ2 1700 aa23.5■■□□□ 1.35
R3HDM1-215ENST00000483021 UBE3CQ15386 1083 aa23.5■■□□□ 1.35
R3HDM1-215ENST00000483021 ZSCAN25Q6NSZ9 544 aa23.5■■□□□ 1.35
R3HDM1-215ENST00000483021 DDRGK1Q96HY6 314 aa23.5■■□□□ 1.35
R3HDM1-215ENST00000483021 CNMDO75829 334 aa23.49■■□□□ 1.35
R3HDM1-215ENST00000483021 FRMPD3Q5JV73 1810 aa23.49■■□□□ 1.35
R3HDM1-215ENST00000483021 ZNF236Q9UL36 1845 aa23.48■■□□□ 1.35
R3HDM1-215ENST00000483021 SPDYE16A6NNV3 312 aaPredicted RBP23.48■■□□□ 1.35
R3HDM1-215ENST00000483021 CYP2D6P10635 497 aa23.48■■□□□ 1.35
R3HDM1-215ENST00000483021 EVX2Q03828 476 aa23.48■■□□□ 1.35
R3HDM1-215ENST00000483021 MAP2K5Q13163 448 aa23.48■■□□□ 1.35
R3HDM1-215ENST00000483021 C20orf194Q5TEA3 1177 aa23.48■■□□□ 1.35
R3HDM1-215ENST00000483021 DIS3LQ8TF46 1054 aaKnown RBP23.48■■□□□ 1.35
R3HDM1-215ENST00000483021 NBPF3Q9H094 633 aa23.48■■□□□ 1.35
R3HDM1-215ENST00000483021 OGDHLQ9ULD0 1010 aa23.48■■□□□ 1.35
R3HDM1-215ENST00000483021 RLFQ13129 1914 aa23.47■■□□□ 1.35
R3HDM1-215ENST00000483021 WDR78Q5VTH9 848 aa23.47■■□□□ 1.35
R3HDM1-215ENST00000483021 SLC44A5Q8NCS7 719 aa23.47■■□□□ 1.35
R3HDM1-215ENST00000483021 SH2D4AQ9H788 454 aa23.47■■□□□ 1.35
R3HDM1-215ENST00000483021 ARHGEF10LQ9HCE6 1279 aa23.47■■□□□ 1.35
R3HDM1-215ENST00000483021 RBM27Q9P2N5 1060 aaKnown RBP23.47■■□□□ 1.35
R3HDM1-215ENST00000483021 IVNS1ABPQ9Y6Y0 642 aa23.47■■□□□ 1.35
R3HDM1-215ENST00000483021 A0A1W2PRG0 241 aa23.46■■□□□ 1.35
R3HDM1-215ENST00000483021 SLC15A5A6NIM6 579 aa23.46■■□□□ 1.35
R3HDM1-215ENST00000483021 PRKAB2O43741 272 aa23.46■■□□□ 1.35
R3HDM1-215ENST00000483021 CACNB2Q08289 660 aaPredicted RBP23.46■■□□□ 1.35
R3HDM1-215ENST00000483021 PARP14Q460N5 1801 aa23.46■■□□□ 1.35
R3HDM1-215ENST00000483021 LPAR1Q92633 364 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 238.7 ms