RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 OSBP2Q969R2 916 aa10.88□□□□□ -0.67
VCP-206ENST00000480327 DEFB118Q96PH6 123 aa10.88□□□□□ -0.67
VCP-206ENST00000480327 SEC62Q99442 399 aaKnown RBP10.88□□□□□ -0.67
VCP-206ENST00000480327 PUS7LQ9H0K6 701 aaKnown RBP10.88□□□□□ -0.67
VCP-206ENST00000480327 DNAJC18Q9H819 358 aa10.88□□□□□ -0.67
VCP-206ENST00000480327 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.88□□□□□ -0.67
VCP-206ENST00000480327 GJD2Q9UKL4 321 aa10.88□□□□□ -0.67
VCP-206ENST00000480327 A0A0C4DFX4 3053 aa10.87□□□□□ -0.67
VCP-206ENST00000480327 IGSF3O75054 1194 aa10.87□□□□□ -0.67
VCP-206ENST00000480327 ZFYP08048 801 aaPredicted RBP10.87□□□□□ -0.67
VCP-206ENST00000480327 CAP2P40123 477 aa10.87□□□□□ -0.67
VCP-206ENST00000480327 HMGCS2P54868 508 aa10.87□□□□□ -0.67
VCP-206ENST00000480327 PPP4CP60510 307 aa10.87□□□□□ -0.67
VCP-206ENST00000480327 NMIQ13287 307 aaPredicted RBP10.87□□□□□ -0.67
VCP-206ENST00000480327 SH3D19Q5HYK7 790 aa10.87□□□□□ -0.67
VCP-206ENST00000480327 POTEEQ6S8J3 1075 aa10.87□□□□□ -0.67
VCP-206ENST00000480327 CCDC129Q6ZRS4 1044 aa10.87□□□□□ -0.67
VCP-206ENST00000480327 MAPKAPK5Q8IW41 473 aa10.87□□□□□ -0.67
VCP-206ENST00000480327 ZNF280CQ8ND82 737 aa10.87□□□□□ -0.67
VCP-206ENST00000480327 APPBP2Q92624 585 aa10.87□□□□□ -0.67
VCP-206ENST00000480327 FAM227BQ96M60 508 aa10.87□□□□□ -0.67
VCP-206ENST00000480327 RIOK1Q9BRS2 568 aaKnown RBP10.87□□□□□ -0.67
VCP-206ENST00000480327 HTATIP2Q9BUP3 242 aa10.87□□□□□ -0.67
VCP-206ENST00000480327 RLFQ13129 1914 aa10.86□□□□□ -0.67
VCP-206ENST00000480327 PRKAB2O43741 272 aa10.86□□□□□ -0.67
VCP-206ENST00000480327 PLCG2P16885 1265 aa10.86□□□□□ -0.67
VCP-206ENST00000480327 USP5P45974 858 aa10.86□□□□□ -0.67
VCP-206ENST00000480327 ZMYM1Q5SVZ6 1142 aa10.86□□□□□ -0.67
VCP-206ENST00000480327 SDR42E1Q8WUS8 393 aa10.86□□□□□ -0.67
VCP-206ENST00000480327 PAWRQ96IZ0 340 aaKnown RBP10.86□□□□□ -0.67
VCP-206ENST00000480327 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.86□□□□□ -0.67
VCP-206ENST00000480327 ASCC2Q9H1I8 757 aaPredicted RBP10.86□□□□□ -0.67
VCP-206ENST00000480327 DIAPH3Q9NSV4 1193 aa10.86□□□□□ -0.67
VCP-206ENST00000480327 SAP30BPQ9UHR5 308 aaKnown RBP10.86□□□□□ -0.67
VCP-206ENST00000480327 A0A0D9SFI3 127 aa10.85□□□□□ -0.67
VCP-206ENST00000480327 USP17L5A8MUK1 530 aa10.85□□□□□ -0.67
VCP-206ENST00000480327 GPAA1O43292 621 aa10.85□□□□□ -0.67
VCP-206ENST00000480327 TFRCP02786 760 aaKnown RBP10.85□□□□□ -0.67
VCP-206ENST00000480327 TMED8Q6PL24 325 aaPredicted RBP10.85□□□□□ -0.67
VCP-206ENST00000480327 CWC27Q6UX04 472 aaKnown RBP10.85□□□□□ -0.67
VCP-206ENST00000480327 METTL16Q86W50 562 aaKnown RBP10.85□□□□□ -0.67
VCP-206ENST00000480327 TRIB2Q92519 343 aa10.85□□□□□ -0.67
VCP-206ENST00000480327 CRNKL1Q9BZJ0 848 aaKnown RBP10.85□□□□□ -0.67
VCP-206ENST00000480327 TXNRD2Q9NNW7 524 aa10.85□□□□□ -0.67
VCP-206ENST00000480327 MORF4L1Q9UBU8 362 aa10.85□□□□□ -0.67
VCP-206ENST00000480327 TAOK2Q9UL54 1235 aa10.85□□□□□ -0.67
VCP-206ENST00000480327 SLC4A4Q9Y6R1 1079 aa10.85□□□□□ -0.67
VCP-206ENST00000480327 PARP14Q460N5 1801 aa10.85□□□□□ -0.67
VCP-206ENST00000480327 NAV1Q8NEY1 1877 aa10.85□□□□□ -0.67
VCP-206ENST00000480327 FLT1P17948 1338 aa10.84□□□□□ -0.67
VCP-206ENST00000480327 MYH8P13535 1937 aa10.84□□□□□ -0.67
VCP-206ENST00000480327 GCLCP48506 637 aaPredicted RBP10.84□□□□□ -0.67
VCP-206ENST00000480327 MTMR2Q13614 643 aa10.84□□□□□ -0.67
VCP-206ENST00000480327 BMP2KLQ5H9B9 411 aa10.84□□□□□ -0.67
VCP-206ENST00000480327 COA7Q96BR5 231 aa10.84□□□□□ -0.67
VCP-206ENST00000480327 LRCH3Q96II8 777 aa10.84□□□□□ -0.67
VCP-206ENST00000480327 STRBPQ96SI9 672 aaKnown RBP10.84□□□□□ -0.67
VCP-206ENST00000480327 P2RX7Q99572 595 aaKnown RBP10.84□□□□□ -0.67
VCP-206ENST00000480327 WDR18Q9BV38 432 aa10.84□□□□□ -0.67
VCP-206ENST00000480327 HERC5Q9UII4 1024 aaKnown RBP10.84□□□□□ -0.67
VCP-206ENST00000480327 PNMA3Q9UL41 463 aa10.84□□□□□ -0.67
VCP-206ENST00000480327 PALD1Q9ULE6 856 aa10.84□□□□□ -0.67
VCP-206ENST00000480327 NR2E3Q9Y5X4 410 aa10.84□□□□□ -0.67
VCP-206ENST00000480327 UNC80Q8N2C7 3258 aa10.83□□□□□ -0.67
VCP-206ENST00000480327 HIP1O00291 1037 aa10.83□□□□□ -0.68
VCP-206ENST00000480327 EVI5O60447 810 aa10.83□□□□□ -0.68
VCP-206ENST00000480327 HMGCRP04035 888 aa10.83□□□□□ -0.68
VCP-206ENST00000480327 APPP05067 770 aa10.83□□□□□ -0.68
VCP-206ENST00000480327 CHMLP26374 656 aa10.83□□□□□ -0.68
VCP-206ENST00000480327 HOXA7P31268 230 aaPredicted RBP10.83□□□□□ -0.68
VCP-206ENST00000480327 BACE1P56817 501 aa10.83□□□□□ -0.68
VCP-206ENST00000480327 Q3C1V9 767 aa10.83□□□□□ -0.68
VCP-206ENST00000480327 MCMDC2Q4G0Z9 681 aa10.83□□□□□ -0.68
VCP-206ENST00000480327 MAP3K21Q5TCX8 1036 aa10.83□□□□□ -0.68
VCP-206ENST00000480327 ZNF589Q86UQ0 364 aaPredicted RBP10.83□□□□□ -0.68
VCP-206ENST00000480327 CERS3Q8IU89 383 aa10.83□□□□□ -0.68
VCP-206ENST00000480327 GDF15Q99988 308 aa10.83□□□□□ -0.68
VCP-206ENST00000480327 HELLSQ9NRZ9 838 aa10.83□□□□□ -0.68
VCP-206ENST00000480327 PI4KBQ9UBF8 816 aa10.83□□□□□ -0.68
VCP-206ENST00000480327 RBPJLQ9UBG7 517 aa10.83□□□□□ -0.68
VCP-206ENST00000480327 BAZ2AQ9UIF9 1905 aaKnown RBP10.83□□□□□ -0.68
VCP-206ENST00000480327 ZNFX1Q9P2E3 1918 aaKnown RBP10.82□□□□□ -0.68
VCP-206ENST00000480327 LTBP2Q14767 1821 aa10.82□□□□□ -0.68
VCP-206ENST00000480327 A0A0G2JMZ2 1700 aa10.82□□□□□ -0.68
VCP-206ENST00000480327 GDF11O95390 407 aa10.82□□□□□ -0.68
VCP-206ENST00000480327 CYP2D6P10635 497 aa10.82□□□□□ -0.68
VCP-206ENST00000480327 EVX2Q03828 476 aa10.82□□□□□ -0.68
VCP-206ENST00000480327 VPS53Q5VIR6 699 aa10.82□□□□□ -0.68
VCP-206ENST00000480327 USP6NLQ92738 828 aa10.82□□□□□ -0.68
VCP-206ENST00000480327 TBC1D2Q9BYX2 928 aa10.82□□□□□ -0.68
VCP-206ENST00000480327 IL25Q9H293 177 aa10.82□□□□□ -0.68
VCP-206ENST00000480327 DCP1AQ9NPI6 582 aaPredicted RBP10.82□□□□□ -0.68
VCP-206ENST00000480327 MCM9Q9NXL9 1143 aa10.82□□□□□ -0.68
VCP-206ENST00000480327 EYSQ5T1H1 3165 aa10.82□□□□□ -0.68
VCP-206ENST00000480327 PFASO15067 1338 aa10.82□□□□□ -0.68
VCP-206ENST00000480327 RPTORQ8N122 1335 aa10.82□□□□□ -0.68
VCP-206ENST00000480327 CYP2D7A0A087X1C5 515 aa10.81□□□□□ -0.68
VCP-206ENST00000480327 A0A1W2PPC1 479 aa10.81□□□□□ -0.68
VCP-206ENST00000480327 GSG1L2A8MUP6 293 aa10.81□□□□□ -0.68
VCP-206ENST00000480327 PATL2C9JE40 543 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms