RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 COL11A2P13942 1736 aaPredicted RBP6.13□□□□□ -1.43
PTCD3-213ENST00000480102 FAM196BA6NMK8 535 aa6.12□□□□□ -1.43
PTCD3-213ENST00000480102 SFI1A8K8P3 1242 aa6.12□□□□□ -1.43
PTCD3-213ENST00000480102 F6X3S4 739 aa6.12□□□□□ -1.43
PTCD3-213ENST00000480102 NBPF7P0C2Y1 421 aaPredicted RBP6.12□□□□□ -1.43
PTCD3-213ENST00000480102 TRIM27P14373 513 aa6.12□□□□□ -1.43
PTCD3-213ENST00000480102 NUP98P52948 1817 aa6.12□□□□□ -1.43
PTCD3-213ENST00000480102 ZNF280AP59817 542 aaPredicted RBP6.12□□□□□ -1.43
PTCD3-213ENST00000480102 CXCL9Q07325 125 aa6.12□□□□□ -1.43
PTCD3-213ENST00000480102 TEAD4Q15561 434 aa6.12□□□□□ -1.43
PTCD3-213ENST00000480102 CCDC57Q2TAC2 916 aa6.12□□□□□ -1.43
PTCD3-213ENST00000480102 CRTC2Q53ET0 693 aaPredicted RBP6.12□□□□□ -1.43
PTCD3-213ENST00000480102 ANKRD36CQ5JPF3 1778 aa6.12□□□□□ -1.43
PTCD3-213ENST00000480102 TBCELQ5QJ74 424 aa6.12□□□□□ -1.43
PTCD3-213ENST00000480102 STRIP1Q5VSL9 837 aa6.12□□□□□ -1.43
PTCD3-213ENST00000480102 ZNF385CQ66K41 422 aaPredicted RBP6.12□□□□□ -1.43
PTCD3-213ENST00000480102 CIAPIN1Q6FI81 312 aa6.12□□□□□ -1.43
PTCD3-213ENST00000480102 LMBR1LQ6UX01 489 aa6.12□□□□□ -1.43
PTCD3-213ENST00000480102 SVOPQ8N4V2 548 aa6.12□□□□□ -1.43
PTCD3-213ENST00000480102 WDR90Q96KV7 1748 aa6.12□□□□□ -1.43
PTCD3-213ENST00000480102 MPHOSPH8Q99549 860 aa6.12□□□□□ -1.43
PTCD3-213ENST00000480102 MRIQ9BWK5 157 aa6.12□□□□□ -1.43
PTCD3-213ENST00000480102 CFHR5Q9BXR6 569 aa6.12□□□□□ -1.43
PTCD3-213ENST00000480102 TAF1DQ9H5J8 278 aaPredicted RBP6.12□□□□□ -1.43
PTCD3-213ENST00000480102 ADARB2Q9NS39 739 aaKnown RBP6.12□□□□□ -1.43
PTCD3-213ENST00000480102 HACL1Q9UJ83 578 aa6.12□□□□□ -1.43
PTCD3-213ENST00000480102 SUGT1Q9Y2Z0 365 aa6.12□□□□□ -1.43
PTCD3-213ENST00000480102 RBM19Q9Y4C8 960 aaKnown RBP6.12□□□□□ -1.43
PTCD3-213ENST00000480102 RIPOR2Q9Y4F9 1068 aa6.12□□□□□ -1.43
PTCD3-213ENST00000480102 IRS2Q9Y4H2 1338 aa6.12□□□□□ -1.43
PTCD3-213ENST00000480102 DUOX1Q9NRD9 1551 aa6.11□□□□□ -1.43
PTCD3-213ENST00000480102 PDS5AQ29RF7 1337 aaKnown RBP6.11□□□□□ -1.43
PTCD3-213ENST00000480102 USP17L15C9J2P7 530 aa6.11□□□□□ -1.43
PTCD3-213ENST00000480102 USP17L10C9JJH3 530 aa6.11□□□□□ -1.43
PTCD3-213ENST00000480102 USP17L13C9JLJ4 530 aa6.11□□□□□ -1.43
PTCD3-213ENST00000480102 USP17L12C9JPN9 530 aa6.11□□□□□ -1.43
PTCD3-213ENST00000480102 USP17L11C9JVI0 530 aa6.11□□□□□ -1.43
PTCD3-213ENST00000480102 USP17L21D6R901 530 aa6.11□□□□□ -1.43
PTCD3-213ENST00000480102 USP17L18D6R9N7 530 aa6.11□□□□□ -1.43
PTCD3-213ENST00000480102 USP17L22D6RA61 530 aa6.11□□□□□ -1.43
PTCD3-213ENST00000480102 USP17L17D6RBQ6 530 aa6.11□□□□□ -1.43
PTCD3-213ENST00000480102 USP17L19D6RCP7 530 aa6.11□□□□□ -1.43
PTCD3-213ENST00000480102 USP17L20D6RJB6 530 aa6.11□□□□□ -1.43
PTCD3-213ENST00000480102 IL1R1P14778 569 aa6.11□□□□□ -1.43
PTCD3-213ENST00000480102 HSPA6P17066 643 aa6.11□□□□□ -1.43
PTCD3-213ENST00000480102 MX2P20592 715 aa6.11□□□□□ -1.43
PTCD3-213ENST00000480102 NOS2P35228 1153 aa6.11□□□□□ -1.43
PTCD3-213ENST00000480102 SEC13P55735 322 aa6.11□□□□□ -1.43
PTCD3-213ENST00000480102 GPSM2P81274 684 aa6.11□□□□□ -1.43
PTCD3-213ENST00000480102 USP17L24Q0WX57 530 aa6.11□□□□□ -1.43
PTCD3-213ENST00000480102 PTK7Q13308 1070 aa6.11□□□□□ -1.43
PTCD3-213ENST00000480102 ZKSCAN2Q63HK3 967 aa6.11□□□□□ -1.43
PTCD3-213ENST00000480102 FIGNL1Q6PIW4 674 aa6.11□□□□□ -1.43
PTCD3-213ENST00000480102 TMED8Q6PL24 325 aaPredicted RBP6.11□□□□□ -1.43
PTCD3-213ENST00000480102 LDHAL6AQ6ZMR3 332 aa6.11□□□□□ -1.43
PTCD3-213ENST00000480102 NLRP8Q86W28 1048 aa6.11□□□□□ -1.43
PTCD3-213ENST00000480102 CCDC82Q8N4S0 544 aa6.11□□□□□ -1.43
PTCD3-213ENST00000480102 ANKRD44Q8N8A2 993 aa6.11□□□□□ -1.43
PTCD3-213ENST00000480102 TSEN2Q8NCE0 465 aaKnown RBP6.11□□□□□ -1.43
PTCD3-213ENST00000480102 HHIPL1Q96JK4 782 aa6.11□□□□□ -1.43
PTCD3-213ENST00000480102 GMLQ99445 158 aa6.11□□□□□ -1.43
PTCD3-213ENST00000480102 TSPAN10Q9H1Z9 355 aaPredicted RBP6.11□□□□□ -1.43
PTCD3-213ENST00000480102 VRTNQ9H8Y1 702 aa6.11□□□□□ -1.43
PTCD3-213ENST00000480102 NMRK2Q9NPI5 230 aa6.11□□□□□ -1.43
PTCD3-213ENST00000480102 COPRSQ9NQ92 184 aa6.11□□□□□ -1.43
PTCD3-213ENST00000480102 SEC31BQ9NQW1 1179 aa6.11□□□□□ -1.43
PTCD3-213ENST00000480102 GPRC5DQ9NZD1 345 aa6.11□□□□□ -1.43
PTCD3-213ENST00000480102 ANKIB1Q9P2G1 1089 aa6.11□□□□□ -1.43
PTCD3-213ENST00000480102 SERPINA10Q9UK55 444 aa6.11□□□□□ -1.43
PTCD3-213ENST00000480102 NOB1Q9ULX3 412 aaKnown RBP6.11□□□□□ -1.43
PTCD3-213ENST00000480102 PHF24Q9UPV7 400 aa6.11□□□□□ -1.43
PTCD3-213ENST00000480102 CHD4Q14839 1912 aa6.11□□□□□ -1.43
PTCD3-213ENST00000480102 FER1L6Q2WGJ9 1857 aa6.11□□□□□ -1.43
PTCD3-213ENST00000480102 LAMB2P55268 1798 aa6.11□□□□□ -1.43
PTCD3-213ENST00000480102 N4BP2Q86UW6 1770 aaPredicted RBP6.11□□□□□ -1.43
PTCD3-213ENST00000480102 CEP350Q5VT06 3117 aa6.1□□□□□ -1.43
PTCD3-213ENST00000480102 ZNF804BA4D1E1 1349 aa6.1□□□□□ -1.43
PTCD3-213ENST00000480102 PASKQ96RG2 1323 aa6.1□□□□□ -1.43
PTCD3-213ENST00000480102 PITPNM2Q9BZ72 1349 aa6.1□□□□□ -1.43
PTCD3-213ENST00000480102 UNCXA6NJT0 531 aa6.1□□□□□ -1.43
PTCD3-213ENST00000480102 TCERG1O14776 1098 aaKnown RBP6.1□□□□□ -1.43
PTCD3-213ENST00000480102 DDNO94850 711 aaPredicted RBP6.1□□□□□ -1.43
PTCD3-213ENST00000480102 SASH1O94885 1247 aa6.1□□□□□ -1.43
PTCD3-213ENST00000480102 UBTFL1P0CB47 393 aaPredicted RBP6.1□□□□□ -1.43
PTCD3-213ENST00000480102 EPHX2P34913 555 aa6.1□□□□□ -1.43
PTCD3-213ENST00000480102 TXLNAP40222 546 aa6.1□□□□□ -1.43
PTCD3-213ENST00000480102 RFX5P48382 616 aaPredicted RBP6.1□□□□□ -1.43
PTCD3-213ENST00000480102 PSMA6P60900 246 aaKnown RBP6.1□□□□□ -1.43
PTCD3-213ENST00000480102 HDLBPQ00341 1268 aaKnown RBP6.1□□□□□ -1.43
PTCD3-213ENST00000480102 CHRNDQ07001 517 aa6.1□□□□□ -1.43
PTCD3-213ENST00000480102 AAMPQ13685 434 aa6.1□□□□□ -1.43
PTCD3-213ENST00000480102 PDE3AQ14432 1141 aa6.1□□□□□ -1.43
PTCD3-213ENST00000480102 AOC3Q16853 763 aa6.1□□□□□ -1.43
PTCD3-213ENST00000480102 ARSJQ5FYB0 599 aaPredicted RBP6.1□□□□□ -1.43
PTCD3-213ENST00000480102 SLC4A10Q6U841 1118 aa6.1□□□□□ -1.43
PTCD3-213ENST00000480102 OLFM4Q6UX06 510 aa6.1□□□□□ -1.43
PTCD3-213ENST00000480102 C16orf71Q8IYS4 520 aaPredicted RBP6.1□□□□□ -1.43
PTCD3-213ENST00000480102 VGLL2Q8N8G2 317 aa6.1□□□□□ -1.43
PTCD3-213ENST00000480102 WHAMMQ8TF30 809 aa6.1□□□□□ -1.43
PTCD3-213ENST00000480102 SUCLG2Q96I99 432 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms