RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 ETV3P41162 512 aa6.25□□□□□ -1.41
SMARCA1-204ENST00000478420 CHMP4BP1P59074 171 aa6.25□□□□□ -1.41
SMARCA1-204ENST00000478420 CDH24Q86UP0 819 aa6.25□□□□□ -1.41
SMARCA1-204ENST00000478420 OR6P1Q8NGX9 317 aa6.25□□□□□ -1.41
SMARCA1-204ENST00000478420 GMLQ99445 158 aa6.25□□□□□ -1.41
SMARCA1-204ENST00000478420 KIF2CQ99661 725 aa6.25□□□□□ -1.41
SMARCA1-204ENST00000478420 TM9SF2Q99805 663 aa6.25□□□□□ -1.41
SMARCA1-204ENST00000478420 KRTAP9-2Q9BYQ4 174 aa6.25□□□□□ -1.41
SMARCA1-204ENST00000478420 LRRC4CQ9HCJ2 640 aa6.25□□□□□ -1.41
SMARCA1-204ENST00000478420 PRDM5Q9NQX1 630 aaPredicted RBP6.25□□□□□ -1.41
SMARCA1-204ENST00000478420 CEP131Q9UPN4 1083 aa6.25□□□□□ -1.41
SMARCA1-204ENST00000478420 PRR19A6NJB7 356 aa6.24□□□□□ -1.41
SMARCA1-204ENST00000478420 CYP26A1O43174 497 aa6.24□□□□□ -1.41
SMARCA1-204ENST00000478420 TGFB1P01137 390 aa6.24□□□□□ -1.41
SMARCA1-204ENST00000478420 FGRP09769 529 aa6.24□□□□□ -1.41
SMARCA1-204ENST00000478420 ITGB7P26010 798 aa6.24□□□□□ -1.41
SMARCA1-204ENST00000478420 CCNFP41002 786 aa6.24□□□□□ -1.41
SMARCA1-204ENST00000478420 GIPRP48546 466 aa6.24□□□□□ -1.41
SMARCA1-204ENST00000478420 INTS3Q68E01 1043 aaKnown RBP6.24□□□□□ -1.41
SMARCA1-204ENST00000478420 ARHGAP27Q6ZUM4 889 aa6.24□□□□□ -1.41
SMARCA1-204ENST00000478420 LSRQ86X29 649 aaPredicted RBP6.24□□□□□ -1.41
SMARCA1-204ENST00000478420 DNAJB8Q8NHS0 232 aa6.24□□□□□ -1.41
SMARCA1-204ENST00000478420 BAHD1Q8TBE0 780 aaPredicted RBP6.24□□□□□ -1.41
SMARCA1-204ENST00000478420 ANAPC16Q96DE5 110 aa6.24□□□□□ -1.41
SMARCA1-204ENST00000478420 SHDQ96IW2 340 aa6.24□□□□□ -1.41
SMARCA1-204ENST00000478420 MAPK8IP1Q9UQF2 711 aa6.24□□□□□ -1.41
SMARCA1-204ENST00000478420 KRTAP9-6A0A140TA67 174 aa6.23□□□□□ -1.41
SMARCA1-204ENST00000478420 IGF2BP3O00425 579 aaKnown RBP eCLIP6.23□□□□□ -1.41
SMARCA1-204ENST00000478420 TNFRSF10CO14798 259 aa6.23□□□□□ -1.41
SMARCA1-204ENST00000478420 FOSL1P15407 271 aa6.23□□□□□ -1.41
SMARCA1-204ENST00000478420 GRIK1P39086 918 aa6.23□□□□□ -1.41
SMARCA1-204ENST00000478420 SFRP5Q5T4F7 317 aa6.23□□□□□ -1.41
SMARCA1-204ENST00000478420 FAM214BQ7L5A3 538 aa6.23□□□□□ -1.41
SMARCA1-204ENST00000478420 MCF2L2Q86YR7 1114 aa6.23□□□□□ -1.41
SMARCA1-204ENST00000478420 PPP1R13LQ8WUF5 828 aa6.23□□□□□ -1.41
SMARCA1-204ENST00000478420 COX4I2Q96KJ9 171 aa6.23□□□□□ -1.41
SMARCA1-204ENST00000478420 HEXIM2Q96MH2 286 aaKnown RBP6.23□□□□□ -1.41
SMARCA1-204ENST00000478420 TANGO6Q9C0B7 1094 aa6.23□□□□□ -1.41
SMARCA1-204ENST00000478420 RNF112Q9ULX5 631 aa6.23□□□□□ -1.41
SMARCA1-204ENST00000478420 GNAT3A8MTJ3 354 aa6.22□□□□□ -1.41
SMARCA1-204ENST00000478420 GUCY2CP25092 1073 aa6.22□□□□□ -1.41
SMARCA1-204ENST00000478420 POLR2BP30876 1174 aaKnown RBP6.22□□□□□ -1.41
SMARCA1-204ENST00000478420 INTS5Q6P9B9 1019 aaKnown RBP6.22□□□□□ -1.41
SMARCA1-204ENST00000478420 RUFY4Q6ZNE9 571 aa6.22□□□□□ -1.41
SMARCA1-204ENST00000478420 TAB3Q8N5C8 712 aaPredicted RBP6.22□□□□□ -1.41
SMARCA1-204ENST00000478420 SLC9A7Q96T83 725 aa6.22□□□□□ -1.41
SMARCA1-204ENST00000478420 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.22□□□□□ -1.412e-7■■■■■ 33
SMARCA1-204ENST00000478420 MKNK2Q9HBH9 465 aa6.22□□□□□ -1.41
SMARCA1-204ENST00000478420 MRVI1Q9Y6F6 885 aa6.22□□□□□ -1.41
SMARCA1-204ENST00000478420 COBLO75128 1261 aa6.21□□□□□ -1.42
SMARCA1-204ENST00000478420 UBOX5O94941 541 aa6.21□□□□□ -1.42
SMARCA1-204ENST00000478420 SF3A1Q15459 793 aaKnown RBP6.21□□□□□ -1.42
SMARCA1-204ENST00000478420 FAM181AQ8N9Y4 354 aa6.21□□□□□ -1.42
SMARCA1-204ENST00000478420 DHRS1Q96LJ7 313 aa6.21□□□□□ -1.42
SMARCA1-204ENST00000478420 KREMEN1Q96MU8 473 aa6.21□□□□□ -1.42
SMARCA1-204ENST00000478420 CNTNAP4Q9C0A0 1308 aa6.21□□□□□ -1.42
SMARCA1-204ENST00000478420 FAM86C2PA6NEL3 165 aa6.2□□□□□ -1.42
SMARCA1-204ENST00000478420 CLEC3AO75596 197 aa6.2□□□□□ -1.42
SMARCA1-204ENST00000478420 CBX7O95931 251 aa6.2□□□□□ -1.42
SMARCA1-204ENST00000478420 ACRP10323 421 aa6.2□□□□□ -1.42
SMARCA1-204ENST00000478420 ATP2B1P20020 1258 aa6.2□□□□□ -1.42
SMARCA1-204ENST00000478420 KIR3DL1P43629 444 aa6.2□□□□□ -1.42
SMARCA1-204ENST00000478420 OXCT1P55809 520 aa6.2□□□□□ -1.42
SMARCA1-204ENST00000478420 PPP2R5EQ16537 467 aa6.2□□□□□ -1.42
SMARCA1-204ENST00000478420 C22orf34Q6ZV56 151 aa6.2□□□□□ -1.42
SMARCA1-204ENST00000478420 MFSD4AQ8N468 514 aa6.2□□□□□ -1.42
SMARCA1-204ENST00000478420 C19orf47Q8N9M1 422 aaKnown RBP6.2□□□□□ -1.42
SMARCA1-204ENST00000478420 RNF141Q8WVD5 230 aa6.2□□□□□ -1.42
SMARCA1-204ENST00000478420 ASPNQ9BXN1 380 aa6.2□□□□□ -1.42
SMARCA1-204ENST00000478420 SLC12A7Q9Y666 1083 aa6.2□□□□□ -1.42
SMARCA1-204ENST00000478420 FAM155AB1AL88 458 aaPredicted RBP6.19□□□□□ -1.42
SMARCA1-204ENST00000478420 CEACAM5P06731 702 aa6.19□□□□□ -1.42
SMARCA1-204ENST00000478420 ZNF865P0CJ78 1059 aaPredicted RBP6.19□□□□□ -1.42
SMARCA1-204ENST00000478420 ITIH2P19823 946 aa6.19□□□□□ -1.42
SMARCA1-204ENST00000478420 HOXA10P31260 410 aaPredicted RBP6.19□□□□□ -1.42
SMARCA1-204ENST00000478420 RNF4P78317 190 aa6.19□□□□□ -1.42
SMARCA1-204ENST00000478420 TNNI3KQ59H18 835 aa6.19□□□□□ -1.42
SMARCA1-204ENST00000478420 UNC5AQ6ZN44 842 aa6.19□□□□□ -1.42
SMARCA1-204ENST00000478420 TTC6Q86TZ1 520 aa6.19□□□□□ -1.42
SMARCA1-204ENST00000478420 FAM169BQ8N8A8 192 aa6.19□□□□□ -1.42
SMARCA1-204ENST00000478420 NETO1Q8TDF5 533 aa6.19□□□□□ -1.42
SMARCA1-204ENST00000478420 SLC6A18Q96N87 628 aa6.19□□□□□ -1.42
SMARCA1-204ENST00000478420 ZNF408Q9H9D4 720 aa6.19□□□□□ -1.42
SMARCA1-204ENST00000478420 PRKAG3Q9UGI9 489 aa6.19□□□□□ -1.42
SMARCA1-204ENST00000478420 ZC3H7BQ9UGR2 993 aaKnown RBP6.19□□□□□ -1.42
SMARCA1-204ENST00000478420 PRR33A8MZF0 331 aa6.18□□□□□ -1.42
SMARCA1-204ENST00000478420 SMAD7O15105 426 aaKnown RBP6.18□□□□□ -1.42
SMARCA1-204ENST00000478420 STK10O94804 968 aaKnown RBP6.18□□□□□ -1.42
SMARCA1-204ENST00000478420 ETFBP38117 255 aa6.18□□□□□ -1.42
SMARCA1-204ENST00000478420 CASP7P55210 303 aa6.18□□□□□ -1.42
SMARCA1-204ENST00000478420 ZYXQ15942 572 aaKnown RBP6.18□□□□□ -1.42
SMARCA1-204ENST00000478420 IFI16Q16666 785 aaKnown RBP6.18□□□□□ -1.42
SMARCA1-204ENST00000478420 ZMYM1Q5SVZ6 1142 aa6.18□□□□□ -1.42
SMARCA1-204ENST00000478420 KRTAP1-3Q8IUG1 177 aa6.18□□□□□ -1.42
SMARCA1-204ENST00000478420 TMEM192Q8IY95 271 aa6.18□□□□□ -1.42
SMARCA1-204ENST00000478420 PLD6Q8N2A8 252 aaKnown RBP6.18□□□□□ -1.42
SMARCA1-204ENST00000478420 SREK1Q8WXA9 508 aaKnown RBP6.18□□□□□ -1.42
SMARCA1-204ENST00000478420 FBXL18Q96ME1 805 aa6.18□□□□□ -1.42
SMARCA1-204ENST00000478420 KCNH3Q9ULD8 1083 aa6.18□□□□□ -1.42
SMARCA1-204ENST00000478420 CAPN6Q9Y6Q1 641 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms