RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 APPBP2Q92624 585 aa25.21■■□□□ 1.63
SREBF1-210ENST00000471445 DYNLL2Q96FJ2 89 aa25.21■■□□□ 1.63
SREBF1-210ENST00000471445 SLC4A4Q9Y6R1 1079 aa25.21■■□□□ 1.63
SREBF1-210ENST00000471445 MYCP01106 439 aaPredicted RBP25.2■■□□□ 1.62
SREBF1-210ENST00000471445 MTFR1Q15390 333 aa25.2■■□□□ 1.62
SREBF1-210ENST00000471445 GTF3C2Q8WUA4 911 aaPredicted RBP25.2■■□□□ 1.62
SREBF1-210ENST00000471445 COA7Q96BR5 231 aa25.2■■□□□ 1.62
SREBF1-210ENST00000471445 DDRGK1Q96HY6 314 aa25.2■■□□□ 1.62
SREBF1-210ENST00000471445 A0A0G2JMZ2 1700 aa25.2■■□□□ 1.62
SREBF1-210ENST00000471445 PARP14Q460N5 1801 aa25.19■■□□□ 1.62
SREBF1-210ENST00000471445 CYP2D7A0A087X1C5 515 aa25.19■■□□□ 1.62
SREBF1-210ENST00000471445 USP17L12C9JPN9 530 aa25.19■■□□□ 1.62
SREBF1-210ENST00000471445 USP17L21D6R901 530 aa25.19■■□□□ 1.62
SREBF1-210ENST00000471445 SMIM22K7EJ46 135 aa25.19■■□□□ 1.62
SREBF1-210ENST00000471445 ERC2O15083 957 aa25.19■■□□□ 1.62
SREBF1-210ENST00000471445 ZFYP08048 801 aaPredicted RBP25.19■■□□□ 1.62
SREBF1-210ENST00000471445 HDAC1Q13547 482 aaPredicted RBP25.19■■□□□ 1.62
SREBF1-210ENST00000471445 TMEM179Q6ZVK1 233 aa25.19■■□□□ 1.62
SREBF1-210ENST00000471445 AMOTL1Q8IY63 956 aa25.19■■□□□ 1.62
SREBF1-210ENST00000471445 PXYLP1Q8TE99 480 aa25.19■■□□□ 1.62
SREBF1-210ENST00000471445 STRBPQ96SI9 672 aaKnown RBP25.19■■□□□ 1.62
SREBF1-210ENST00000471445 TXNRD2Q9NNW7 524 aa25.19■■□□□ 1.62
SREBF1-210ENST00000471445 RLFQ13129 1914 aa25.18■■□□□ 1.62
SREBF1-210ENST00000471445 RNF113AO15541 343 aaKnown RBP25.18■■□□□ 1.62
SREBF1-210ENST00000471445 ADCY3O60266 1144 aa25.18■■□□□ 1.62
SREBF1-210ENST00000471445 GLRX3O76003 335 aaKnown RBP25.18■■□□□ 1.62
SREBF1-210ENST00000471445 VCAM1P19320 739 aa25.18■■□□□ 1.62
SREBF1-210ENST00000471445 MX1P20591 662 aa25.18■■□□□ 1.62
SREBF1-210ENST00000471445 C16orf86Q6ZW13 317 aa25.18■■□□□ 1.62
SREBF1-210ENST00000471445 OSBP2Q969R2 916 aa25.18■■□□□ 1.62
SREBF1-210ENST00000471445 ARPP21Q9UBL0 812 aaPredicted RBP25.18■■□□□ 1.62
SREBF1-210ENST00000471445 MPHOSPH10O00566 681 aaKnown RBP25.17■■□□□ 1.62
SREBF1-210ENST00000471445 UBXN2AP68543 259 aa25.17■■□□□ 1.62
SREBF1-210ENST00000471445 GCC1Q96CN9 775 aa25.17■■□□□ 1.62
SREBF1-210ENST00000471445 USP17L15C9J2P7 530 aa25.16■■□□□ 1.62
SREBF1-210ENST00000471445 USP17L13C9JLJ4 530 aa25.16■■□□□ 1.62
SREBF1-210ENST00000471445 USP17L11C9JVI0 530 aa25.16■■□□□ 1.62
SREBF1-210ENST00000471445 USP17L18D6R9N7 530 aa25.16■■□□□ 1.62
SREBF1-210ENST00000471445 USP17L22D6RA61 530 aa25.16■■□□□ 1.62
SREBF1-210ENST00000471445 USP17L17D6RBQ6 530 aa25.16■■□□□ 1.62
SREBF1-210ENST00000471445 USP17L19D6RCP7 530 aa25.16■■□□□ 1.62
SREBF1-210ENST00000471445 USP17L20D6RJB6 530 aa25.16■■□□□ 1.62
SREBF1-210ENST00000471445 PEX10O60683 326 aa25.16■■□□□ 1.62
SREBF1-210ENST00000471445 AKR1B1P15121 316 aa25.16■■□□□ 1.62
SREBF1-210ENST00000471445 USP17L24Q0WX57 530 aa25.16■■□□□ 1.62
SREBF1-210ENST00000471445 AAMPQ13685 434 aa25.16■■□□□ 1.62
SREBF1-210ENST00000471445 CTR9Q6PD62 1173 aa25.16■■□□□ 1.62
SREBF1-210ENST00000471445 POTEEQ6S8J3 1075 aa25.16■■□□□ 1.62
SREBF1-210ENST00000471445 SHISA4Q96DD7 197 aa25.16■■□□□ 1.62
SREBF1-210ENST00000471445 RBPJLQ9UBG7 517 aa25.16■■□□□ 1.62
SREBF1-210ENST00000471445 ROBO3Q96MS0 1386 aa25.16■■□□□ 1.62
SREBF1-210ENST00000471445 A0A1W2PRG0 241 aa25.15■■□□□ 1.62
SREBF1-210ENST00000471445 GPAA1O43292 621 aa25.15■■□□□ 1.62
SREBF1-210ENST00000471445 ELNP15502 786 aa25.15■■□□□ 1.62
SREBF1-210ENST00000471445 CDK8P49336 464 aa25.15■■□□□ 1.62
SREBF1-210ENST00000471445 ERVK-9P63128 1117 aa25.15■■□□□ 1.62
SREBF1-210ENST00000471445 ERVK-24P63145 666 aa25.15■■□□□ 1.62
SREBF1-210ENST00000471445 PRPF38BQ5VTL8 546 aaKnown RBP25.15■■□□□ 1.62
SREBF1-210ENST00000471445 GIMAP6Q6P9H5 292 aa25.15■■□□□ 1.62
SREBF1-210ENST00000471445 CATSPERGQ6ZRH7 1159 aa25.15■■□□□ 1.62
SREBF1-210ENST00000471445 GPRC5AQ8NFJ5 357 aa25.15■■□□□ 1.62
SREBF1-210ENST00000471445 CCDC17Q96LX7 622 aa25.15■■□□□ 1.62
SREBF1-210ENST00000471445 GSG1L2A8MUP6 293 aa25.14■■□□□ 1.62
SREBF1-210ENST00000471445 M0R2C6 588 aa25.14■■□□□ 1.62
SREBF1-210ENST00000471445 CCL5P13501 91 aa25.14■■□□□ 1.62
SREBF1-210ENST00000471445 LRRFIP1Q32MZ4 808 aaKnown RBP25.14■■□□□ 1.62
SREBF1-210ENST00000471445 BIN2Q9UBW5 565 aaPredicted RBP25.14■■□□□ 1.62
SREBF1-210ENST00000471445 GJD2Q9UKL4 321 aa25.14■■□□□ 1.62
SREBF1-210ENST00000471445 INHAP05111 366 aa25.13■■□□□ 1.61
SREBF1-210ENST00000471445 SBK1Q52WX2 424 aa25.13■■□□□ 1.61
SREBF1-210ENST00000471445 ANKRD45Q5TZF3 282 aa25.13■■□□□ 1.61
SREBF1-210ENST00000471445 LBX2Q6XYB7 198 aa25.13■■□□□ 1.61
SREBF1-210ENST00000471445 CLEC10AQ8IUN9 316 aa25.13■■□□□ 1.61
SREBF1-210ENST00000471445 PAGR1Q9BTK6 254 aa25.13■■□□□ 1.61
SREBF1-210ENST00000471445 RPAP3Q9H6T3 665 aaPredicted RBP25.13■■□□□ 1.61
SREBF1-210ENST00000471445 EPB41L4AQ9HCS5 686 aaPredicted RBP25.13■■□□□ 1.61
SREBF1-210ENST00000471445 CNMDO75829 334 aa25.12■■□□□ 1.61
SREBF1-210ENST00000471445 GJB1P08034 283 aa25.12■■□□□ 1.61
SREBF1-210ENST00000471445 ICA1Q05084 483 aa25.12■■□□□ 1.61
SREBF1-210ENST00000471445 Q3C1V9 767 aa25.12■■□□□ 1.61
SREBF1-210ENST00000471445 NKX2-3Q8TAU0 364 aa25.12■■□□□ 1.61
SREBF1-210ENST00000471445 FSD1Q9BTV5 496 aa25.12■■□□□ 1.61
SREBF1-210ENST00000471445 MKI67P46013 3256 aaKnown RBP25.11■■□□□ 1.61
SREBF1-210ENST00000471445 SPDYE16A6NNV3 312 aaPredicted RBP25.11■■□□□ 1.61
SREBF1-210ENST00000471445 GNAT2P19087 354 aa25.11■■□□□ 1.61
SREBF1-210ENST00000471445 MAPK4P31152 587 aa25.11■■□□□ 1.61
SREBF1-210ENST00000471445 GJA8P48165 433 aa25.11■■□□□ 1.61
SREBF1-210ENST00000471445 SOCS4Q8WXH5 440 aa25.11■■□□□ 1.61
SREBF1-210ENST00000471445 RNF208Q9H0X6 261 aa25.11■■□□□ 1.61
SREBF1-210ENST00000471445 UNC93B1Q9H1C4 597 aa25.11■■□□□ 1.61
SREBF1-210ENST00000471445 PORCNQ9H237 461 aa25.11■■□□□ 1.61
SREBF1-210ENST00000471445 ARHGEF10LQ9HCE6 1279 aa25.11■■□□□ 1.61
SREBF1-210ENST00000471445 ZBTB47Q9UFB7 747 aaPredicted RBP25.11■■□□□ 1.61
SREBF1-210ENST00000471445 RABGAP1Q9Y3P9 1069 aa25.11■■□□□ 1.61
SREBF1-210ENST00000471445 SIAH1Q8IUQ4 282 aa25.1■■□□□ 1.61
SREBF1-210ENST00000471445 TMX2Q9Y320 296 aa25.1■■□□□ 1.61
SREBF1-210ENST00000471445 MYH4Q9Y623 1939 aa25.1■■□□□ 1.61
SREBF1-210ENST00000471445 KIAA1755Q5JYT7 1200 aa25.09■■□□□ 1.61
SREBF1-210ENST00000471445 ZMYM1Q5SVZ6 1142 aa25.09■■□□□ 1.61
SREBF1-210ENST00000471445 LPAR1Q92633 364 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms