RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 ARMT1Q9H993 441 aa22.41■■□□□ 1.18
UBE2D4-208ENST00000454350 MCM9Q9NXL9 1143 aa22.41■■□□□ 1.18
UBE2D4-208ENST00000454350 PRKAB2O43741 272 aa22.4■■□□□ 1.18
UBE2D4-208ENST00000454350 POLR3DP05423 398 aaPredicted RBP22.4■■□□□ 1.18
UBE2D4-208ENST00000454350 RAB3GAP1Q15042 981 aa22.4■■□□□ 1.18
UBE2D4-208ENST00000454350 HABP4Q5JVS0 413 aaKnown RBP22.4■■□□□ 1.18
UBE2D4-208ENST00000454350 GPRC5AQ8NFJ5 357 aa22.4■■□□□ 1.18
UBE2D4-208ENST00000454350 PORCNQ9H237 461 aa22.4■■□□□ 1.18
UBE2D4-208ENST00000454350 TAOK2Q9UL54 1235 aa22.4■■□□□ 1.18
UBE2D4-208ENST00000454350 RANBP2P49792 3224 aaKnown RBP22.4■■□□□ 1.18
UBE2D4-208ENST00000454350 H0YGN5 161 aa22.39■■□□□ 1.17
UBE2D4-208ENST00000454350 SMIM22K7EJ46 135 aa22.39■■□□□ 1.17
UBE2D4-208ENST00000454350 CNMDO75829 334 aa22.39■■□□□ 1.17
UBE2D4-208ENST00000454350 ERVK-9P63128 1117 aa22.39■■□□□ 1.17
UBE2D4-208ENST00000454350 ERVK-24P63145 666 aa22.39■■□□□ 1.17
UBE2D4-208ENST00000454350 TRIM32Q13049 653 aa22.39■■□□□ 1.17
UBE2D4-208ENST00000454350 ZYXQ15942 572 aaKnown RBP22.39■■□□□ 1.17
UBE2D4-208ENST00000454350 SLC44A5Q8NCS7 719 aa22.39■■□□□ 1.17
UBE2D4-208ENST00000454350 USP6NLQ92738 828 aa22.39■■□□□ 1.17
UBE2D4-208ENST00000454350 DEFB118Q96PH6 123 aa22.39■■□□□ 1.17
UBE2D4-208ENST00000454350 A0A0G2JMZ2 1700 aa22.38■■□□□ 1.17
UBE2D4-208ENST00000454350 A0A1W2PRG0 241 aa22.38■■□□□ 1.17
UBE2D4-208ENST00000454350 MBD4O95243 580 aa22.38■■□□□ 1.17
UBE2D4-208ENST00000454350 HMGCRP04035 888 aa22.38■■□□□ 1.17
UBE2D4-208ENST00000454350 VCAM1P19320 739 aa22.38■■□□□ 1.17
UBE2D4-208ENST00000454350 SEPT2Q15019 361 aa22.38■■□□□ 1.17
UBE2D4-208ENST00000454350 CATSPERGQ6ZRH7 1159 aa22.38■■□□□ 1.17
UBE2D4-208ENST00000454350 TRIB2Q92519 343 aa22.38■■□□□ 1.17
UBE2D4-208ENST00000454350 USP17L15C9J2P7 530 aa22.37■■□□□ 1.17
UBE2D4-208ENST00000454350 USP17L13C9JLJ4 530 aa22.37■■□□□ 1.17
UBE2D4-208ENST00000454350 USP17L11C9JVI0 530 aa22.37■■□□□ 1.17
UBE2D4-208ENST00000454350 USP17L18D6R9N7 530 aa22.37■■□□□ 1.17
UBE2D4-208ENST00000454350 USP17L22D6RA61 530 aa22.37■■□□□ 1.17
UBE2D4-208ENST00000454350 USP17L17D6RBQ6 530 aa22.37■■□□□ 1.17
UBE2D4-208ENST00000454350 USP17L19D6RCP7 530 aa22.37■■□□□ 1.17
UBE2D4-208ENST00000454350 USP17L20D6RJB6 530 aa22.37■■□□□ 1.17
UBE2D4-208ENST00000454350 FARP2O94887 1054 aaPredicted RBP22.37■■□□□ 1.17
UBE2D4-208ENST00000454350 USP14P54578 494 aa22.37■■□□□ 1.17
UBE2D4-208ENST00000454350 USP17L24Q0WX57 530 aa22.37■■□□□ 1.17
UBE2D4-208ENST00000454350 UBE3CQ15386 1083 aa22.37■■□□□ 1.17
UBE2D4-208ENST00000454350 FEZ1Q99689 392 aa22.37■■□□□ 1.17
UBE2D4-208ENST00000454350 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.37■■□□□ 1.17
UBE2D4-208ENST00000454350 DCTPP1Q9H773 170 aa22.37■■□□□ 1.17
UBE2D4-208ENST00000454350 CABP5Q9NP86 173 aa22.37■■□□□ 1.17
UBE2D4-208ENST00000454350 GREB1LQ9C091 1923 aaPredicted RBP22.37■■□□□ 1.17
UBE2D4-208ENST00000454350 FRMPD3Q5JV73 1810 aa22.36■■□□□ 1.17
UBE2D4-208ENST00000454350 MAP3K21Q5TCX8 1036 aa22.36■■□□□ 1.17
UBE2D4-208ENST00000454350 LBX2Q6XYB7 198 aa22.36■■□□□ 1.17
UBE2D4-208ENST00000454350 SIAH1Q8IUQ4 282 aa22.36■■□□□ 1.17
UBE2D4-208ENST00000454350 GTF3C2Q8WUA4 911 aaPredicted RBP22.36■■□□□ 1.17
UBE2D4-208ENST00000454350 DYNLL2Q96FJ2 89 aa22.36■■□□□ 1.17
UBE2D4-208ENST00000454350 PAGR1Q9BTK6 254 aa22.36■■□□□ 1.17
UBE2D4-208ENST00000454350 ATP8A2Q9NTI2 1148 aa22.36■■□□□ 1.17
UBE2D4-208ENST00000454350 XRCC5P13010 732 aaKnown RBP22.35■■□□□ 1.17
UBE2D4-208ENST00000454350 CYP2B6P20813 491 aa22.35■■□□□ 1.17
UBE2D4-208ENST00000454350 MAPK4P31152 587 aa22.35■■□□□ 1.17
UBE2D4-208ENST00000454350 MORN1Q5T089 497 aa22.35■■□□□ 1.17
UBE2D4-208ENST00000454350 GPR142Q7Z601 462 aa22.35■■□□□ 1.17
UBE2D4-208ENST00000454350 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.35■■□□□ 1.17
UBE2D4-208ENST00000454350 COLQQ9Y215 455 aaPredicted RBP22.35■■□□□ 1.17
UBE2D4-208ENST00000454350 RABGAP1Q9Y3P9 1069 aa22.35■■□□□ 1.17
UBE2D4-208ENST00000454350 RPTORQ8N122 1335 aa22.34■■□□□ 1.17
UBE2D4-208ENST00000454350 COL11A1P12107 1806 aaPredicted RBP22.34■■□□□ 1.17
UBE2D4-208ENST00000454350 CYP2D7A0A087X1C5 515 aa22.34■■□□□ 1.17
UBE2D4-208ENST00000454350 CAPN2P17655 700 aa22.34■■□□□ 1.17
UBE2D4-208ENST00000454350 KIAA1755Q5JYT7 1200 aa22.34■■□□□ 1.17
UBE2D4-208ENST00000454350 C12orf60Q5U649 245 aa22.34■■□□□ 1.17
UBE2D4-208ENST00000454350 SOCS4Q8WXH5 440 aa22.34■■□□□ 1.17
UBE2D4-208ENST00000454350 NUDT12Q9BQG2 462 aa22.34■■□□□ 1.17
UBE2D4-208ENST00000454350 PUS7LQ9H0K6 701 aaKnown RBP22.34■■□□□ 1.17
UBE2D4-208ENST00000454350 BTBD7Q9P203 1132 aa22.34■■□□□ 1.17
UBE2D4-208ENST00000454350 ZNFX1Q9P2E3 1918 aaKnown RBP22.33■■□□□ 1.17
UBE2D4-208ENST00000454350 SPDYE16A6NNV3 312 aaPredicted RBP22.33■■□□□ 1.17
UBE2D4-208ENST00000454350 TFRCP02786 760 aaKnown RBP22.33■■□□□ 1.17
UBE2D4-208ENST00000454350 MNX1P50219 401 aaPredicted RBP22.33■■□□□ 1.17
UBE2D4-208ENST00000454350 RPAP3Q9H6T3 665 aaPredicted RBP22.33■■□□□ 1.17
UBE2D4-208ENST00000454350 ECHDC1Q9NTX5 307 aa22.33■■□□□ 1.17
UBE2D4-208ENST00000454350 SWAP70Q9UH65 585 aa22.33■■□□□ 1.17
UBE2D4-208ENST00000454350 USP17L12C9JPN9 530 aa22.32■■□□□ 1.16
UBE2D4-208ENST00000454350 USP17L21D6R901 530 aa22.32■■□□□ 1.16
UBE2D4-208ENST00000454350 AKR1B1P15121 316 aa22.32■■□□□ 1.16
UBE2D4-208ENST00000454350 TMEM179Q6ZVK1 233 aa22.32■■□□□ 1.16
UBE2D4-208ENST00000454350 PLEKHH3Q7Z736 793 aa22.32■■□□□ 1.16
UBE2D4-208ENST00000454350 CLEC10AQ8IUN9 316 aa22.32■■□□□ 1.16
UBE2D4-208ENST00000454350 DPF3Q92784 378 aa22.32■■□□□ 1.16
UBE2D4-208ENST00000454350 PCDHB15Q9Y5E8 787 aa22.32■■□□□ 1.16
UBE2D4-208ENST00000454350 CCL14Q16627 93 aa22.31■■□□□ 1.16
UBE2D4-208ENST00000454350 DIS3LQ8TF46 1054 aaKnown RBP22.31■■□□□ 1.16
UBE2D4-208ENST00000454350 HTATIP2Q9BUP3 242 aa22.31■■□□□ 1.16
UBE2D4-208ENST00000454350 HMX1Q9NP08 348 aaPredicted RBP22.31■■□□□ 1.16
UBE2D4-208ENST00000454350 ZNF236Q9UL36 1845 aa22.31■■□□□ 1.16
UBE2D4-208ENST00000454350 MPHOSPH10O00566 681 aaKnown RBP22.3■■□□□ 1.16
UBE2D4-208ENST00000454350 CDK8P49336 464 aa22.3■■□□□ 1.16
UBE2D4-208ENST00000454350 TSHZ3Q63HK5 1081 aa22.3■■□□□ 1.16
UBE2D4-208ENST00000454350 C16orf86Q6ZW13 317 aa22.3■■□□□ 1.16
UBE2D4-208ENST00000454350 PAWRQ96IZ0 340 aaKnown RBP22.3■■□□□ 1.16
UBE2D4-208ENST00000454350 SZT2Q5T011 3432 aa22.3■■□□□ 1.16
UBE2D4-208ENST00000454350 PRKAR2AP13861 404 aaKnown RBP22.29■■□□□ 1.16
UBE2D4-208ENST00000454350 FXR1P51114 621 aaKnown RBP eCLIP22.29■■□□□ 1.16
UBE2D4-208ENST00000454350 CTR9Q6PD62 1173 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms