RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 SEPT2Q15019 361 aa23.33■■□□□ 1.33
USP40-207ENST00000450940 SLC44A5Q8NCS7 719 aa23.33■■□□□ 1.33
USP40-207ENST00000450940 GTF3C2Q8WUA4 911 aaPredicted RBP23.33■■□□□ 1.33
USP40-207ENST00000450940 DYNLL2Q96FJ2 89 aa23.33■■□□□ 1.33
USP40-207ENST00000450940 FEZ1Q99689 392 aa23.33■■□□□ 1.33
USP40-207ENST00000450940 RBPJLQ9UBG7 517 aa23.33■■□□□ 1.33
USP40-207ENST00000450940 SALL3Q9BXA9 1300 aa23.33■■□□□ 1.32
USP40-207ENST00000450940 PLXNB2O15031 1838 aa23.32■■□□□ 1.32
USP40-207ENST00000450940 ERC2O15083 957 aa23.32■■□□□ 1.32
USP40-207ENST00000450940 ADCY3O60266 1144 aa23.32■■□□□ 1.32
USP40-207ENST00000450940 MTFR1Q15390 333 aa23.32■■□□□ 1.32
USP40-207ENST00000450940 POTEEQ6S8J3 1075 aa23.32■■□□□ 1.32
USP40-207ENST00000450940 OTUD7AQ8TE49 926 aaPredicted RBP23.32■■□□□ 1.32
USP40-207ENST00000450940 APPBP2Q92624 585 aa23.32■■□□□ 1.32
USP40-207ENST00000450940 OSBP2Q969R2 916 aa23.32■■□□□ 1.32
USP40-207ENST00000450940 DDRGK1Q96HY6 314 aa23.32■■□□□ 1.32
USP40-207ENST00000450940 TXNRD2Q9NNW7 524 aa23.32■■□□□ 1.32
USP40-207ENST00000450940 GJD2Q9UKL4 321 aa23.32■■□□□ 1.32
USP40-207ENST00000450940 MKI67P46013 3256 aaKnown RBP23.32■■□□□ 1.32
USP40-207ENST00000450940 CYP2D7A0A087X1C5 515 aa23.31■■□□□ 1.32
USP40-207ENST00000450940 USP17L15C9J2P7 530 aa23.31■■□□□ 1.32
USP40-207ENST00000450940 USP17L13C9JLJ4 530 aa23.31■■□□□ 1.32
USP40-207ENST00000450940 USP17L11C9JVI0 530 aa23.31■■□□□ 1.32
USP40-207ENST00000450940 USP17L18D6R9N7 530 aa23.31■■□□□ 1.32
USP40-207ENST00000450940 USP17L22D6RA61 530 aa23.31■■□□□ 1.32
USP40-207ENST00000450940 USP17L17D6RBQ6 530 aa23.31■■□□□ 1.32
USP40-207ENST00000450940 USP17L19D6RCP7 530 aa23.31■■□□□ 1.32
USP40-207ENST00000450940 USP17L20D6RJB6 530 aa23.31■■□□□ 1.32
USP40-207ENST00000450940 GLRX3O76003 335 aaKnown RBP23.31■■□□□ 1.32
USP40-207ENST00000450940 USP17L24Q0WX57 530 aa23.31■■□□□ 1.32
USP40-207ENST00000450940 GIMAP6Q6P9H5 292 aa23.31■■□□□ 1.32
USP40-207ENST00000450940 CTR9Q6PD62 1173 aa23.31■■□□□ 1.32
USP40-207ENST00000450940 CATSPERGQ6ZRH7 1159 aa23.31■■□□□ 1.32
USP40-207ENST00000450940 TMEM179Q6ZVK1 233 aa23.31■■□□□ 1.32
USP40-207ENST00000450940 C16orf86Q6ZW13 317 aa23.31■■□□□ 1.32
USP40-207ENST00000450940 GPRC5AQ8NFJ5 357 aa23.31■■□□□ 1.32
USP40-207ENST00000450940 GCC1Q96CN9 775 aa23.31■■□□□ 1.32
USP40-207ENST00000450940 CCDC17Q96LX7 622 aa23.31■■□□□ 1.32
USP40-207ENST00000450940 A0A1W2PRG0 241 aa23.3■■□□□ 1.32
USP40-207ENST00000450940 GSG1L2A8MUP6 293 aa23.3■■□□□ 1.32
USP40-207ENST00000450940 SMIM22K7EJ46 135 aa23.3■■□□□ 1.32
USP40-207ENST00000450940 MYCP01106 439 aaPredicted RBP23.3■■□□□ 1.32
USP40-207ENST00000450940 VCAM1P19320 739 aa23.3■■□□□ 1.32
USP40-207ENST00000450940 CDK8P49336 464 aa23.3■■□□□ 1.32
USP40-207ENST00000450940 UBXN2AP68543 259 aa23.3■■□□□ 1.32
USP40-207ENST00000450940 ZYXQ15942 572 aaKnown RBP23.3■■□□□ 1.32
USP40-207ENST00000450940 SBK1Q52WX2 424 aa23.3■■□□□ 1.32
USP40-207ENST00000450940 AMOTL1Q8IY63 956 aa23.3■■□□□ 1.32
USP40-207ENST00000450940 MX1P20591 662 aa23.29■■□□□ 1.32
USP40-207ENST00000450940 LRRFIP1Q32MZ4 808 aaKnown RBP23.29■■□□□ 1.32
USP40-207ENST00000450940 LBX2Q6XYB7 198 aa23.29■■□□□ 1.32
USP40-207ENST00000450940 SIAH1Q8IUQ4 282 aa23.29■■□□□ 1.32
USP40-207ENST00000450940 MPHOSPH10O00566 681 aaKnown RBP23.28■■□□□ 1.32
USP40-207ENST00000450940 GJB1P08034 283 aa23.28■■□□□ 1.32
USP40-207ENST00000450940 CCL5P13501 91 aa23.28■■□□□ 1.32
USP40-207ENST00000450940 AKR1B1P15121 316 aa23.28■■□□□ 1.32
USP40-207ENST00000450940 ERVK-9P63128 1117 aa23.28■■□□□ 1.32
USP40-207ENST00000450940 ERVK-24P63145 666 aa23.28■■□□□ 1.32
USP40-207ENST00000450940 Q3C1V9 767 aa23.28■■□□□ 1.32
USP40-207ENST00000450940 ARPP21Q9UBL0 812 aaPredicted RBP23.28■■□□□ 1.32
USP40-207ENST00000450940 BIN2Q9UBW5 565 aaPredicted RBP23.28■■□□□ 1.32
USP40-207ENST00000450940 RABGAP1Q9Y3P9 1069 aa23.28■■□□□ 1.32
USP40-207ENST00000450940 RLFQ13129 1914 aa23.27■■□□□ 1.32
USP40-207ENST00000450940 PEX10O60683 326 aa23.27■■□□□ 1.32
USP40-207ENST00000450940 ELNP15502 786 aa23.27■■□□□ 1.32
USP40-207ENST00000450940 ANKRD45Q5TZF3 282 aa23.27■■□□□ 1.32
USP40-207ENST00000450940 PRPF38BQ5VTL8 546 aaKnown RBP23.27■■□□□ 1.32
USP40-207ENST00000450940 NKX2-3Q8TAU0 364 aa23.27■■□□□ 1.32
USP40-207ENST00000450940 STAP2Q9UGK3 403 aa23.27■■□□□ 1.32
USP40-207ENST00000450940 GPAA1O43292 621 aa23.26■■□□□ 1.31
USP40-207ENST00000450940 GNAT2P19087 354 aa23.26■■□□□ 1.31
USP40-207ENST00000450940 MAPK4P31152 587 aa23.26■■□□□ 1.31
USP40-207ENST00000450940 GJA8P48165 433 aa23.26■■□□□ 1.31
USP40-207ENST00000450940 SHISA4Q96DD7 197 aa23.26■■□□□ 1.31
USP40-207ENST00000450940 RNF208Q9H0X6 261 aa23.26■■□□□ 1.31
USP40-207ENST00000450940 TMX2Q9Y320 296 aa23.26■■□□□ 1.31
USP40-207ENST00000450940 GREB1LQ9C091 1923 aaPredicted RBP23.25■■□□□ 1.31
USP40-207ENST00000450940 CNMDO75829 334 aa23.25■■□□□ 1.31
USP40-207ENST00000450940 INHAP05111 366 aa23.25■■□□□ 1.31
USP40-207ENST00000450940 UNC93B1Q9H1C4 597 aa23.25■■□□□ 1.31
USP40-207ENST00000450940 RPAP3Q9H6T3 665 aaPredicted RBP23.25■■□□□ 1.31
USP40-207ENST00000450940 ROBO3Q96MS0 1386 aa23.25■■□□□ 1.31
USP40-207ENST00000450940 M0R2C6 588 aa23.24■■□□□ 1.31
USP40-207ENST00000450940 PORCNQ9H237 461 aa23.24■■□□□ 1.31
USP40-207ENST00000450940 ARHGEF10LQ9HCE6 1279 aa23.24■■□□□ 1.31
USP40-207ENST00000450940 ZBTB47Q9UFB7 747 aaPredicted RBP23.24■■□□□ 1.31
USP40-207ENST00000450940 SPDYE16A6NNV3 312 aaPredicted RBP23.23■■□□□ 1.31
USP40-207ENST00000450940 PATL2C9JE40 543 aaKnown RBP23.23■■□□□ 1.31
USP40-207ENST00000450940 XRCC5P13010 732 aaKnown RBP23.23■■□□□ 1.31
USP40-207ENST00000450940 CAPN2P17655 700 aa23.23■■□□□ 1.31
USP40-207ENST00000450940 ICA1Q05084 483 aa23.23■■□□□ 1.31
USP40-207ENST00000450940 KIAA1755Q5JYT7 1200 aa23.23■■□□□ 1.31
USP40-207ENST00000450940 ZMYM1Q5SVZ6 1142 aa23.23■■□□□ 1.31
USP40-207ENST00000450940 LPAR1Q92633 364 aa23.23■■□□□ 1.31
USP40-207ENST00000450940 USP6NLQ92738 828 aa23.23■■□□□ 1.31
USP40-207ENST00000450940 PAGR1Q9BTK6 254 aa23.23■■□□□ 1.31
USP40-207ENST00000450940 KANSL2Q9H9L4 492 aa23.23■■□□□ 1.31
USP40-207ENST00000450940 EPB41L4AQ9HCS5 686 aaPredicted RBP23.23■■□□□ 1.31
USP40-207ENST00000450940 PARP14Q460N5 1801 aa23.22■■□□□ 1.31
USP40-207ENST00000450940 COG2Q14746 738 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms