RNA–Protein interactions for RNA: ENST00000447283.6

GNE-203, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 5 BASIC

Gene GNE, Length 2,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-203ENST00000447283 UBASH3AP57075 661 aa13.11□□□□□ -0.31
GNE-203ENST00000447283 TERF2Q15554 542 aa13.11□□□□□ -0.31
GNE-203ENST00000447283 CPLX2Q6PUV4 134 aaKnown RBP13.11□□□□□ -0.31
GNE-203ENST00000447283 APOA5Q6Q788 366 aa13.11□□□□□ -0.31
GNE-203ENST00000447283 ZNF771Q7L3S4 317 aaPredicted RBP13.11□□□□□ -0.31
GNE-203ENST00000447283 FCHSD1Q86WN1 690 aa13.11□□□□□ -0.31
GNE-203ENST00000447283 ELOA2Q8IYF1 753 aaPredicted RBP13.11□□□□□ -0.31
GNE-203ENST00000447283 ZNF446Q9NWS9 450 aa13.11□□□□□ -0.31
GNE-203ENST00000447283 CD2APQ9Y5K6 639 aa13.11□□□□□ -0.31
GNE-203ENST00000447283 CUTAO60888 179 aa13.11□□□□□ -0.31
GNE-203ENST00000447283 PDE6AP16499 860 aa13.11□□□□□ -0.31
GNE-203ENST00000447283 FAM193AP78312 1265 aa13.11□□□□□ -0.31
GNE-203ENST00000447283 ERCC6LQ2NKX8 1250 aa13.11□□□□□ -0.31
GNE-203ENST00000447283 CYB5R4Q7L1T6 521 aa13.11□□□□□ -0.31
GNE-203ENST00000447283 TBC1D10CQ8IV04 446 aa13.11□□□□□ -0.31
GNE-203ENST00000447283 VSTM4Q8IW00 320 aa13.11□□□□□ -0.31
GNE-203ENST00000447283 MAGEB6Q8N7X4 407 aa13.11□□□□□ -0.31
GNE-203ENST00000447283 WDR66Q8TBY9 1149 aa13.11□□□□□ -0.31
GNE-203ENST00000447283 AIFM3Q96NN9 605 aa13.11□□□□□ -0.31
GNE-203ENST00000447283 COA1Q9GZY4 146 aa13.11□□□□□ -0.31
GNE-203ENST00000447283 WWC3Q9ULE0 1092 aa13.11□□□□□ -0.31
GNE-203ENST00000447283 MYO5AQ9Y4I1 1855 aaKnown RBP13.11□□□□□ -0.31
GNE-203ENST00000447283 ZNF532Q9HCE3 1301 aa13.1□□□□□ -0.31
GNE-203ENST00000447283 TRIM65Q6PJ69 517 aa13.1□□□□□ -0.31
GNE-203ENST00000447283 DPF2Q92785 391 aa13.1□□□□□ -0.31
GNE-203ENST00000447283 TMEM87BQ96K49 555 aa13.1□□□□□ -0.31
GNE-203ENST00000447283 RTFDC1Q9BY42 306 aaPredicted RBP13.1□□□□□ -0.31
GNE-203ENST00000447283 SPON1Q9HCB6 807 aa13.1□□□□□ -0.31
GNE-203ENST00000447283 RAI14Q9P0K7 980 aa13.1□□□□□ -0.31
GNE-203ENST00000447283 SLX4Q8IY92 1834 aa13.1□□□□□ -0.31
GNE-203ENST00000447283 TCRBV5S4A2TA0A5A2 114 aa13.1□□□□□ -0.31
GNE-203ENST00000447283 G3V3G9 751 aa13.1□□□□□ -0.31
GNE-203ENST00000447283 SERPINC1P01008 464 aa13.1□□□□□ -0.31
GNE-203ENST00000447283 CDC27P30260 824 aa13.1□□□□□ -0.31
GNE-203ENST00000447283 PNOCQ13519 176 aa13.1□□□□□ -0.31
GNE-203ENST00000447283 BMS1Q14692 1282 aaKnown RBP13.1□□□□□ -0.31
GNE-203ENST00000447283 NTRK3Q16288 839 aa13.1□□□□□ -0.31
GNE-203ENST00000447283 DCAF8Q5TAQ9 597 aa13.1□□□□□ -0.31
GNE-203ENST00000447283 ISM2Q6H9L7 571 aa13.1□□□□□ -0.31
GNE-203ENST00000447283 METTL16Q86W50 562 aaKnown RBP13.1□□□□□ -0.31
GNE-203ENST00000447283 HOMER1Q86YM7 354 aa13.1□□□□□ -0.31
GNE-203ENST00000447283 SRRTQ9BXP5 876 aaKnown RBP13.1□□□□□ -0.31
GNE-203ENST00000447283 GOLGB1Q14789 3259 aaKnown RBP13.1□□□□□ -0.31
GNE-203ENST00000447283 COL1A1P02452 1464 aaPredicted RBP13.09□□□□□ -0.31
GNE-203ENST00000447283 CHD4Q14839 1912 aa13.09□□□□□ -0.31
GNE-203ENST00000447283 TAF3Q5VWG9 929 aa13.09□□□□□ -0.31
GNE-203ENST00000447283 SPTY2D1Q68D10 685 aaPredicted RBP13.09□□□□□ -0.31
GNE-203ENST00000447283 KRBA2Q6ZNG9 492 aa13.09□□□□□ -0.31
GNE-203ENST00000447283 SGMS1Q86VZ5 419 aa13.09□□□□□ -0.31
GNE-203ENST00000447283 CREBRFQ8IUR6 639 aa13.09□□□□□ -0.31
GNE-203ENST00000447283 REXO1L1PQ8IX06 675 aa13.09□□□□□ -0.31
GNE-203ENST00000447283 RTKN2Q8IZC4 609 aa13.09□□□□□ -0.31
GNE-203ENST00000447283 LRRN4CLQ8ND94 238 aa13.09□□□□□ -0.31
GNE-203ENST00000447283 SUPT20HQ8NEM7 779 aa13.09□□□□□ -0.31
GNE-203ENST00000447283 JAG2Q9Y219 1238 aa13.09□□□□□ -0.31
GNE-203ENST00000447283 STK36Q9NRP7 1315 aa13.09□□□□□ -0.31
GNE-203ENST00000447283 GNL2Q13823 731 aaKnown RBP13.08□□□□□ -0.31
GNE-203ENST00000447283 CFAP100Q494V2 611 aa13.08□□□□□ -0.31
GNE-203ENST00000447283 DALRD3Q5D0E6 543 aaKnown RBP13.08□□□□□ -0.31
GNE-203ENST00000447283 SOGA3Q5TF21 947 aa13.08□□□□□ -0.31
GNE-203ENST00000447283 NKX2-3Q8TAU0 364 aa13.08□□□□□ -0.31
GNE-203ENST00000447283 IGDCC4Q8TDY8 1250 aa13.08□□□□□ -0.31
GNE-203ENST00000447283 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.08□□□□□ -0.31
GNE-203ENST00000447283 LTBP1Q14766 1721 aa13.08□□□□□ -0.32
GNE-203ENST00000447283 ZBTB43O43298 467 aa13.08□□□□□ -0.32
GNE-203ENST00000447283 TOP1P11387 765 aaKnown RBP13.08□□□□□ -0.32
GNE-203ENST00000447283 IARSP41252 1262 aaKnown RBP13.08□□□□□ -0.32
GNE-203ENST00000447283 TRIM29Q14134 588 aa13.08□□□□□ -0.32
GNE-203ENST00000447283 TMEM139Q8IV31 216 aa13.08□□□□□ -0.32
GNE-203ENST00000447283 FAM217BQ9NTX9 383 aaPredicted RBP13.08□□□□□ -0.32
GNE-203ENST00000447283 DNAI1Q9UI46 699 aa13.08□□□□□ -0.32
GNE-203ENST00000447283 KCNH3Q9ULD8 1083 aa13.08□□□□□ -0.32
GNE-203ENST00000447283 KIF13BQ9NQT8 1826 aa13.08□□□□□ -0.32
GNE-203ENST00000447283 ARHGAP6O43182 974 aa13.07□□□□□ -0.32
GNE-203ENST00000447283 ZSCAN12O43309 604 aa13.07□□□□□ -0.32
GNE-203ENST00000447283 RANBP6O60518 1105 aaKnown RBP13.07□□□□□ -0.32
GNE-203ENST00000447283 CLCN6P51797 869 aa13.07□□□□□ -0.32
GNE-203ENST00000447283 MDM2Q00987 491 aaPredicted RBP13.07□□□□□ -0.32
GNE-203ENST00000447283 ALX1Q15699 326 aa13.07□□□□□ -0.32
GNE-203ENST00000447283 DOK7Q18PE1 504 aa13.07□□□□□ -0.32
GNE-203ENST00000447283 LONRF3Q496Y0 759 aa13.07□□□□□ -0.32
GNE-203ENST00000447283 ARHGAP29Q52LW3 1261 aa13.07□□□□□ -0.32
GNE-203ENST00000447283 PODNQ7Z5L7 613 aa13.07□□□□□ -0.32
GNE-203ENST00000447283 FOXP4Q8IVH2 680 aaPredicted RBP13.07□□□□□ -0.32
GNE-203ENST00000447283 PHKBQ93100 1093 aa13.07□□□□□ -0.32
GNE-203ENST00000447283 AIDAQ96BJ3 306 aa13.07□□□□□ -0.32
GNE-203ENST00000447283 CLIC6Q96NY7 704 aa13.07□□□□□ -0.32
GNE-203ENST00000447283 LY9Q9HBG7 655 aa13.07□□□□□ -0.32
GNE-203ENST00000447283 PCDHA5Q9Y5H7 936 aa13.07□□□□□ -0.32
GNE-203ENST00000447283 FHOD1Q9Y613 1164 aa13.07□□□□□ -0.32
GNE-203ENST00000447283 DUOX1Q9NRD9 1551 aa13.07□□□□□ -0.32
GNE-203ENST00000447283 NID2Q14112 1375 aa13.07□□□□□ -0.32
GNE-203ENST00000447283 B4E1Z4 1266 aa13.07□□□□□ -0.32
GNE-203ENST00000447283 LDHBP07195 334 aaKnown RBP13.07□□□□□ -0.32
GNE-203ENST00000447283 CYP7A1P22680 504 aa13.07□□□□□ -0.32
GNE-203ENST00000447283 PRDX5P30044 214 aa13.07□□□□□ -0.32
GNE-203ENST00000447283 LIFRP42702 1097 aa13.07□□□□□ -0.32
GNE-203ENST00000447283 TBX2Q13207 712 aaPredicted RBP13.07□□□□□ -0.32
GNE-203ENST00000447283 TMED8Q6PL24 325 aaPredicted RBP13.07□□□□□ -0.32
GNE-203ENST00000447283 MICU3Q86XE3 530 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms