RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 USP17L19D6RCP7 530 aa25.43■■□□□ 1.66
VSX1-206ENST00000444511 USP17L20D6RJB6 530 aa25.43■■□□□ 1.66
VSX1-206ENST00000444511 MAPK4P31152 587 aa25.43■■□□□ 1.66
VSX1-206ENST00000444511 ERVK-9P63128 1117 aa25.43■■□□□ 1.66
VSX1-206ENST00000444511 ERVK-24P63145 666 aa25.43■■□□□ 1.66
VSX1-206ENST00000444511 USP17L24Q0WX57 530 aa25.43■■□□□ 1.66
VSX1-206ENST00000444511 LRRCC1Q9C099 1032 aa25.43■■□□□ 1.66
VSX1-206ENST00000444511 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.43■■□□□ 1.66
VSX1-206ENST00000444511 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.43■■□□□ 1.66
VSX1-206ENST00000444511 ARMT1Q9H993 441 aa25.43■■□□□ 1.66
VSX1-206ENST00000444511 ADD2P35612 726 aa25.42■■□□□ 1.66
VSX1-206ENST00000444511 GABPAQ06546 454 aa25.42■■□□□ 1.66
VSX1-206ENST00000444511 ACER1Q8TDN7 264 aa25.42■■□□□ 1.66
VSX1-206ENST00000444511 SOCS4Q8WXH5 440 aa25.42■■□□□ 1.66
VSX1-206ENST00000444511 HAUS7Q99871 368 aa25.42■■□□□ 1.66
VSX1-206ENST00000444511 NUDT12Q9BQG2 462 aa25.42■■□□□ 1.66
VSX1-206ENST00000444511 DCP1AQ9NPI6 582 aaPredicted RBP25.42■■□□□ 1.66
VSX1-206ENST00000444511 DDX60LQ5H9U9 1706 aaKnown RBP25.42■■□□□ 1.66
VSX1-206ENST00000444511 MPHOSPH10O00566 681 aaKnown RBP25.41■■□□□ 1.66
VSX1-206ENST00000444511 CYP2B6P20813 491 aa25.41■■□□□ 1.66
VSX1-206ENST00000444511 COLQQ9Y215 455 aaPredicted RBP25.41■■□□□ 1.66
VSX1-206ENST00000444511 NAV1Q8NEY1 1877 aa25.4■■□□□ 1.66
VSX1-206ENST00000444511 MBD4O95243 580 aa25.4■■□□□ 1.66
VSX1-206ENST00000444511 VCAM1P19320 739 aa25.4■■□□□ 1.66
VSX1-206ENST00000444511 EVX2Q03828 476 aa25.4■■□□□ 1.66
VSX1-206ENST00000444511 SEPT2Q15019 361 aa25.4■■□□□ 1.66
VSX1-206ENST00000444511 Q3C1V9 767 aa25.4■■□□□ 1.66
VSX1-206ENST00000444511 CWC22Q9HCG8 908 aaKnown RBP25.4■■□□□ 1.66
VSX1-206ENST00000444511 HMX1Q9NP08 348 aaPredicted RBP25.4■■□□□ 1.66
VSX1-206ENST00000444511 DOCK3Q8IZD9 2030 aa25.39■■□□□ 1.66
VSX1-206ENST00000444511 CYP2D6P10635 497 aa25.39■■□□□ 1.66
VSX1-206ENST00000444511 GUCY1A2P33402 732 aa25.39■■□□□ 1.66
VSX1-206ENST00000444511 TRIM32Q13049 653 aa25.39■■□□□ 1.66
VSX1-206ENST00000444511 SLFNL1Q499Z3 407 aa25.39■■□□□ 1.66
VSX1-206ENST00000444511 CATSPERGQ6ZRH7 1159 aa25.39■■□□□ 1.66
VSX1-206ENST00000444511 TRIB2Q92519 343 aa25.39■■□□□ 1.66
VSX1-206ENST00000444511 CRISPLD2Q9H0B8 497 aa25.39■■□□□ 1.66
VSX1-206ENST00000444511 PORCNQ9H237 461 aa25.39■■□□□ 1.66
VSX1-206ENST00000444511 RABGAP1Q9Y3P9 1069 aa25.39■■□□□ 1.66
VSX1-206ENST00000444511 RPTORQ8N122 1335 aa25.38■■□□□ 1.65
VSX1-206ENST00000444511 PRKAB2O43741 272 aa25.38■■□□□ 1.65
VSX1-206ENST00000444511 SMARCA5O60264 1052 aaPredicted RBP25.38■■□□□ 1.65
VSX1-206ENST00000444511 POTEEQ6S8J3 1075 aa25.38■■□□□ 1.65
VSX1-206ENST00000444511 GPR142Q7Z601 462 aa25.38■■□□□ 1.65
VSX1-206ENST00000444511 PLEKHH3Q7Z736 793 aa25.38■■□□□ 1.65
VSX1-206ENST00000444511 ATP8A2Q9NTI2 1148 aa25.38■■□□□ 1.65
VSX1-206ENST00000444511 PCDH10Q9P2E7 1040 aa25.38■■□□□ 1.65
VSX1-206ENST00000444511 SWAP70Q9UH65 585 aa25.38■■□□□ 1.65
VSX1-206ENST00000444511 NR2E3Q9Y5X4 410 aa25.38■■□□□ 1.65
VSX1-206ENST00000444511 XRCC5P13010 732 aaKnown RBP25.37■■□□□ 1.65
VSX1-206ENST00000444511 CCNA1P78396 465 aa25.37■■□□□ 1.65
VSX1-206ENST00000444511 ZSCAN25Q6NSZ9 544 aa25.37■■□□□ 1.65
VSX1-206ENST00000444511 RPAP3Q9H6T3 665 aaPredicted RBP25.37■■□□□ 1.65
VSX1-206ENST00000444511 RGS2P41220 211 aa25.36■■□□□ 1.65
VSX1-206ENST00000444511 UBE3CQ15386 1083 aa25.36■■□□□ 1.65
VSX1-206ENST00000444511 AMOTL1Q8IY63 956 aa25.36■■□□□ 1.65
VSX1-206ENST00000444511 TRMT44Q8IYL2 757 aaKnown RBP25.36■■□□□ 1.65
VSX1-206ENST00000444511 SLC44A5Q8NCS7 719 aa25.36■■□□□ 1.65
VSX1-206ENST00000444511 DDRGK1Q96HY6 314 aa25.36■■□□□ 1.65
VSX1-206ENST00000444511 ZKSCAN1P17029 563 aaPredicted RBP25.35■■□□□ 1.65
VSX1-206ENST00000444511 TMEM179Q6ZVK1 233 aa25.35■■□□□ 1.65
VSX1-206ENST00000444511 DYNLL2Q96FJ2 89 aa25.35■■□□□ 1.65
VSX1-206ENST00000444511 PAWRQ96IZ0 340 aaKnown RBP25.35■■□□□ 1.65
VSX1-206ENST00000444511 CNMDO75829 334 aa25.34■■□□□ 1.65
VSX1-206ENST00000444511 GLRX3O76003 335 aaKnown RBP25.34■■□□□ 1.65
VSX1-206ENST00000444511 PRKAR2AP13861 404 aaKnown RBP25.34■■□□□ 1.65
VSX1-206ENST00000444511 MORN1Q5T089 497 aa25.34■■□□□ 1.65
VSX1-206ENST00000444511 WDR78Q5VTH9 848 aa25.34■■□□□ 1.65
VSX1-206ENST00000444511 CHRDL2Q6WN34 429 aa25.34■■□□□ 1.65
VSX1-206ENST00000444511 LBX2Q6XYB7 198 aa25.34■■□□□ 1.65
VSX1-206ENST00000444511 NECAB2Q7Z6G3 386 aa25.34■■□□□ 1.65
VSX1-206ENST00000444511 USP6NLQ92738 828 aa25.34■■□□□ 1.65
VSX1-206ENST00000444511 ECHDC1Q9NTX5 307 aa25.34■■□□□ 1.65
VSX1-206ENST00000444511 PLXNB2O15031 1838 aa25.34■■□□□ 1.65
VSX1-206ENST00000444511 A0A1W2PRG0 241 aa25.33■■□□□ 1.65
VSX1-206ENST00000444511 EVI5O60447 810 aa25.33■■□□□ 1.65
VSX1-206ENST00000444511 CHGBP05060 677 aa25.33■■□□□ 1.65
VSX1-206ENST00000444511 ANKLE1Q8NAG6 615 aa25.33■■□□□ 1.65
VSX1-206ENST00000444511 APBA2Q99767 749 aa25.33■■□□□ 1.65
VSX1-206ENST00000444511 SLC4A4Q9Y6R1 1079 aa25.33■■□□□ 1.65
VSX1-206ENST00000444511 SPDYE16A6NNV3 312 aaPredicted RBP25.32■■□□□ 1.64
VSX1-206ENST00000444511 MAP3K21Q5TCX8 1036 aa25.32■■□□□ 1.64
VSX1-206ENST00000444511 DIS3LQ8TF46 1054 aaKnown RBP25.32■■□□□ 1.64
VSX1-206ENST00000444511 GPATCH3Q96I76 525 aa25.32■■□□□ 1.64
VSX1-206ENST00000444511 CYP2D7A0A087X1C5 515 aa25.31■■□□□ 1.64
VSX1-206ENST00000444511 USP17L12C9JPN9 530 aa25.31■■□□□ 1.64
VSX1-206ENST00000444511 USP17L21D6R901 530 aa25.31■■□□□ 1.64
VSX1-206ENST00000444511 FXR1P51114 621 aaKnown RBP eCLIP25.31■■□□□ 1.64
VSX1-206ENST00000444511 MAP2K5Q13163 448 aa25.31■■□□□ 1.64
VSX1-206ENST00000444511 C12orf60Q5U649 245 aa25.31■■□□□ 1.64
VSX1-206ENST00000444511 TANGO6Q9C0B7 1094 aa25.31■■□□□ 1.64
VSX1-206ENST00000444511 DCTPP1Q9H773 170 aa25.31■■□□□ 1.64
VSX1-206ENST00000444511 ARHGEF10LQ9HCE6 1279 aa25.31■■□□□ 1.64
VSX1-206ENST00000444511 BTBD7Q9P203 1132 aa25.31■■□□□ 1.64
VSX1-206ENST00000444511 AKR1B1P15121 316 aa25.3■■□□□ 1.64
VSX1-206ENST00000444511 ICA1Q05084 483 aa25.3■■□□□ 1.64
VSX1-206ENST00000444511 CACNB2Q08289 660 aaPredicted RBP25.3■■□□□ 1.64
VSX1-206ENST00000444511 COG2Q14746 738 aa25.3■■□□□ 1.64
VSX1-206ENST00000444511 CCL14Q16627 93 aa25.3■■□□□ 1.64
VSX1-206ENST00000444511 CCDC17Q96LX7 622 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 182 ms