RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 TRMT44Q8IYL2 757 aaKnown RBP25.15■■□□□ 1.62
CPNE1-219ENST00000440240 ANKLE1Q8NAG6 615 aa25.15■■□□□ 1.62
CPNE1-219ENST00000440240 KIAA1683Q9H0B3 1180 aa25.15■■□□□ 1.62
CPNE1-219ENST00000440240 COG6Q9Y2V7 657 aa25.15■■□□□ 1.62
CPNE1-219ENST00000440240 PDE6AP16499 860 aa25.14■■□□□ 1.62
CPNE1-219ENST00000440240 Q3C1V9 767 aa25.14■■□□□ 1.62
CPNE1-219ENST00000440240 NECAB2Q7Z6G3 386 aa25.14■■□□□ 1.62
CPNE1-219ENST00000440240 PAWRQ96IZ0 340 aaKnown RBP25.14■■□□□ 1.62
CPNE1-219ENST00000440240 GOLIM4O00461 696 aa25.13■■□□□ 1.61
CPNE1-219ENST00000440240 PEX10O60683 326 aa25.13■■□□□ 1.61
CPNE1-219ENST00000440240 ZYXQ15942 572 aaKnown RBP25.13■■□□□ 1.61
CPNE1-219ENST00000440240 SIRT2Q8IXJ6 389 aa25.13■■□□□ 1.61
CPNE1-219ENST00000440240 TRIB2Q92519 343 aa25.13■■□□□ 1.61
CPNE1-219ENST00000440240 DNAJC2Q99543 621 aaKnown RBP25.13■■□□□ 1.61
CPNE1-219ENST00000440240 PAGR1Q9BTK6 254 aa25.13■■□□□ 1.61
CPNE1-219ENST00000440240 RABGAP1Q9Y3P9 1069 aa25.13■■□□□ 1.61
CPNE1-219ENST00000440240 MYH1P12882 1939 aa25.13■■□□□ 1.61
CPNE1-219ENST00000440240 ZNF532Q9HCE3 1301 aa25.12■■□□□ 1.61
CPNE1-219ENST00000440240 RANBP2P49792 3224 aaKnown RBP25.12■■□□□ 1.61
CPNE1-219ENST00000440240 SHMT1P34896 483 aa25.12■■□□□ 1.61
CPNE1-219ENST00000440240 CATSPERGQ6ZRH7 1159 aa25.12■■□□□ 1.61
CPNE1-219ENST00000440240 MCM9Q9NXL9 1143 aa25.12■■□□□ 1.61
CPNE1-219ENST00000440240 RBM27Q9P2N5 1060 aaKnown RBP25.12■■□□□ 1.61
CPNE1-219ENST00000440240 CCNA1P78396 465 aa25.11■■□□□ 1.61
CPNE1-219ENST00000440240 TRIM32Q13049 653 aa25.11■■□□□ 1.61
CPNE1-219ENST00000440240 GPR142Q7Z601 462 aa25.11■■□□□ 1.61
CPNE1-219ENST00000440240 PLEKHH3Q7Z736 793 aa25.11■■□□□ 1.61
CPNE1-219ENST00000440240 PORCNQ9H237 461 aa25.11■■□□□ 1.61
CPNE1-219ENST00000440240 CWC22Q9HCG8 908 aaKnown RBP25.11■■□□□ 1.61
CPNE1-219ENST00000440240 GLRX3O76003 335 aaKnown RBP25.1■■□□□ 1.61
CPNE1-219ENST00000440240 RGS2P41220 211 aa25.1■■□□□ 1.61
CPNE1-219ENST00000440240 GABPAQ06546 454 aa25.1■■□□□ 1.61
CPNE1-219ENST00000440240 MAP3K21Q5TCX8 1036 aa25.1■■□□□ 1.61
CPNE1-219ENST00000440240 POTEEQ6S8J3 1075 aa25.1■■□□□ 1.61
CPNE1-219ENST00000440240 ACER1Q8TDN7 264 aa25.1■■□□□ 1.61
CPNE1-219ENST00000440240 USP6NLQ92738 828 aa25.1■■□□□ 1.61
CPNE1-219ENST00000440240 BCL11AQ9H165 835 aa25.1■■□□□ 1.61
CPNE1-219ENST00000440240 TCRBV5S4A2TA0A5A2 114 aa25.09■■□□□ 1.61
CPNE1-219ENST00000440240 PRKAR2AP13861 404 aaKnown RBP25.09■■□□□ 1.61
CPNE1-219ENST00000440240 VCAM1P19320 739 aa25.09■■□□□ 1.61
CPNE1-219ENST00000440240 MORN1Q5T089 497 aa25.09■■□□□ 1.61
CPNE1-219ENST00000440240 RCAN3Q9UKA8 241 aa25.09■■□□□ 1.61
CPNE1-219ENST00000440240 ZKSCAN1P17029 563 aaPredicted RBP25.08■■□□□ 1.61
CPNE1-219ENST00000440240 ATP5JP18859 108 aa25.08■■□□□ 1.61
CPNE1-219ENST00000440240 LBX2Q6XYB7 198 aa25.08■■□□□ 1.61
CPNE1-219ENST00000440240 NBPF3Q9H094 633 aa25.08■■□□□ 1.61
CPNE1-219ENST00000440240 DCP1AQ9NPI6 582 aaPredicted RBP25.08■■□□□ 1.61
CPNE1-219ENST00000440240 PAG1Q9NWQ8 432 aa25.08■■□□□ 1.61
CPNE1-219ENST00000440240 OGDHLQ9ULD0 1010 aa25.08■■□□□ 1.61
CPNE1-219ENST00000440240 GUCY1A2P33402 732 aa25.07■■□□□ 1.6
CPNE1-219ENST00000440240 SEPT2Q15019 361 aa25.07■■□□□ 1.6
CPNE1-219ENST00000440240 DIS3LQ8TF46 1054 aaKnown RBP25.07■■□□□ 1.6
CPNE1-219ENST00000440240 SDR42E1Q8WUS8 393 aa25.07■■□□□ 1.6
CPNE1-219ENST00000440240 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.07■■□□□ 1.65e-7■■■■■ 32.3
CPNE1-219ENST00000440240 PRO3102Q9H379 93 aa25.07■■□□□ 1.6
CPNE1-219ENST00000440240 BOLA2Q9H3K6 86 aa25.07■■□□□ 1.6
CPNE1-219ENST00000440240 MPHOSPH10O00566 681 aaKnown RBP25.06■■□□□ 1.6
CPNE1-219ENST00000440240 LCORLQ8N3X6 602 aa25.06■■□□□ 1.6
CPNE1-219ENST00000440240 EDC3Q96F86 508 aaKnown RBP25.06■■□□□ 1.6
CPNE1-219ENST00000440240 ATP8A2Q9NTI2 1148 aa25.06■■□□□ 1.6
CPNE1-219ENST00000440240 SWAP70Q9UH65 585 aa25.06■■□□□ 1.6
CPNE1-219ENST00000440240 CNMDO75829 334 aa25.05■■□□□ 1.6
CPNE1-219ENST00000440240 CACNB2Q08289 660 aaPredicted RBP25.05■■□□□ 1.6
CPNE1-219ENST00000440240 MAP2K5Q13163 448 aa25.05■■□□□ 1.6
CPNE1-219ENST00000440240 APBA2Q99767 749 aa25.05■■□□□ 1.6
CPNE1-219ENST00000440240 RPAP3Q9H6T3 665 aaPredicted RBP25.05■■□□□ 1.6
CPNE1-219ENST00000440240 ARMT1Q9H993 441 aa25.05■■□□□ 1.6
CPNE1-219ENST00000440240 HOXC10Q9NYD6 342 aa25.05■■□□□ 1.6
CPNE1-219ENST00000440240 PLXNB2O15031 1838 aa25.05■■□□□ 1.6
CPNE1-219ENST00000440240 ADD2P35612 726 aa25.04■■□□□ 1.6
CPNE1-219ENST00000440240 TMEM179Q6ZVK1 233 aa25.04■■□□□ 1.6
CPNE1-219ENST00000440240 HAUS7Q99871 368 aa25.04■■□□□ 1.6
CPNE1-219ENST00000440240 C11orf49Q9H6J7 331 aa25.04■■□□□ 1.6
CPNE1-219ENST00000440240 A0A1W2PPC1 479 aa25.03■■□□□ 1.6
CPNE1-219ENST00000440240 SLC15A5A6NIM6 579 aa25.03■■□□□ 1.6
CPNE1-219ENST00000440240 PTPREP23469 700 aa25.03■■□□□ 1.6
CPNE1-219ENST00000440240 COG2Q14746 738 aa25.03■■□□□ 1.6
CPNE1-219ENST00000440240 CCL14Q16627 93 aa25.03■■□□□ 1.6
CPNE1-219ENST00000440240 WDR78Q5VTH9 848 aa25.03■■□□□ 1.6
CPNE1-219ENST00000440240 IVNS1ABPQ9Y6Y0 642 aa25.03■■□□□ 1.6
CPNE1-219ENST00000440240 SPDYE16A6NNV3 312 aaPredicted RBP25.02■■□□□ 1.6
CPNE1-219ENST00000440240 MNX1P50219 401 aaPredicted RBP25.02■■□□□ 1.6
CPNE1-219ENST00000440240 AMOTL1Q8IY63 956 aa25.02■■□□□ 1.6
CPNE1-219ENST00000440240 DDRGK1Q96HY6 314 aa25.02■■□□□ 1.6
CPNE1-219ENST00000440240 LRRCC1Q9C099 1032 aa25.02■■□□□ 1.6
CPNE1-219ENST00000440240 BTBD7Q9P203 1132 aa25.02■■□□□ 1.6
CPNE1-219ENST00000440240 A0A1W2PRG0 241 aa25.01■■□□□ 1.59
CPNE1-219ENST00000440240 MBD4O95243 580 aa25.01■■□□□ 1.59
CPNE1-219ENST00000440240 EVX2Q03828 476 aa25.01■■□□□ 1.59
CPNE1-219ENST00000440240 UBE3CQ15386 1083 aa25.01■■□□□ 1.59
CPNE1-219ENST00000440240 MFSD14CQ5VZR4 134 aa25.01■■□□□ 1.59
CPNE1-219ENST00000440240 ZSCAN25Q6NSZ9 544 aa25.01■■□□□ 1.59
CPNE1-219ENST00000440240 CCDC17Q96LX7 622 aa25.01■■□□□ 1.59
CPNE1-219ENST00000440240 PRKAB2O43741 272 aa25■■□□□ 1.59
CPNE1-219ENST00000440240 CYP2D6P10635 497 aa25■■□□□ 1.59
CPNE1-219ENST00000440240 STAP2Q9UGK3 403 aa25■■□□□ 1.59
CPNE1-219ENST00000440240 SZT2Q5T011 3432 aa25■■□□□ 1.59
CPNE1-219ENST00000440240 HOXC6P09630 235 aa24.99■■□□□ 1.59
CPNE1-219ENST00000440240 CCND3P30281 292 aaPredicted RBP24.99■■□□□ 1.59
CPNE1-219ENST00000440240 C12orf60Q5U649 245 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms