RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 PCDHB6Q9Y5E3 794 aa11.97□□□□□ -0.49
CPNE1-218ENST00000439806 V9GY48 417 aaPredicted RBP11.97□□□□□ -0.49
CPNE1-218ENST00000439806 SMC2O95347 1197 aa11.96□□□□□ -0.49
CPNE1-218ENST00000439806 HMGB2P26583 209 aaKnown RBP11.96□□□□□ -0.49
CPNE1-218ENST00000439806 FUT2Q10981 343 aa11.96□□□□□ -0.49
CPNE1-218ENST00000439806 TROAPQ12815 778 aa11.96□□□□□ -0.49
CPNE1-218ENST00000439806 PNOCQ13519 176 aa11.96□□□□□ -0.49
CPNE1-218ENST00000439806 SLC27A3Q5K4L6 730 aa11.96□□□□□ -0.49
CPNE1-218ENST00000439806 C12orf60Q5U649 245 aa11.96□□□□□ -0.49
CPNE1-218ENST00000439806 ELOA2Q8IYF1 753 aaPredicted RBP11.96□□□□□ -0.49
CPNE1-218ENST00000439806 ZNF579Q8NAF0 562 aaKnown RBP11.96□□□□□ -0.49
CPNE1-218ENST00000439806 SH3RF3Q8TEJ3 882 aaPredicted RBP11.96□□□□□ -0.49
CPNE1-218ENST00000439806 CCDC34Q96HJ3 373 aa11.96□□□□□ -0.49
CPNE1-218ENST00000439806 GPR101Q96P66 508 aaPredicted RBP11.96□□□□□ -0.49
CPNE1-218ENST00000439806 MYH8P13535 1937 aa11.96□□□□□ -0.5
CPNE1-218ENST00000439806 FOCADQ5VW36 1801 aa11.95□□□□□ -0.5
CPNE1-218ENST00000439806 ROBO3Q96MS0 1386 aa11.95□□□□□ -0.5
CPNE1-218ENST00000439806 DDX60LQ5H9U9 1706 aaKnown RBP11.95□□□□□ -0.5
CPNE1-218ENST00000439806 hCG_1642624A0A1W2PR95 340 aa11.95□□□□□ -0.5
CPNE1-218ENST00000439806 IKBKBO14920 756 aa11.95□□□□□ -0.5
CPNE1-218ENST00000439806 NMT2O60551 498 aa11.95□□□□□ -0.5
CPNE1-218ENST00000439806 GYS1P13807 737 aa11.95□□□□□ -0.5
CPNE1-218ENST00000439806 NLRP5P59047 1200 aa11.95□□□□□ -0.5
CPNE1-218ENST00000439806 PPP4CP60510 307 aa11.95□□□□□ -0.5
CPNE1-218ENST00000439806 TFAP4Q01664 338 aa11.95□□□□□ -0.5
CPNE1-218ENST00000439806 EVX2Q03828 476 aa11.95□□□□□ -0.5
CPNE1-218ENST00000439806 SLC4A8Q2Y0W8 1093 aa11.95□□□□□ -0.5
CPNE1-218ENST00000439806 SPECC1Q5M775 1068 aa11.95□□□□□ -0.5
CPNE1-218ENST00000439806 ISM2Q6H9L7 571 aa11.95□□□□□ -0.5
CPNE1-218ENST00000439806 KANK3Q6NY19 840 aa11.95□□□□□ -0.5
CPNE1-218ENST00000439806 METTL16Q86W50 562 aaKnown RBP11.95□□□□□ -0.5
CPNE1-218ENST00000439806 SLF2Q8IX21 1173 aa11.95□□□□□ -0.5
CPNE1-218ENST00000439806 ZNF444Q8N0Y2 327 aaPredicted RBP11.95□□□□□ -0.5
CPNE1-218ENST00000439806 PRIMPOLQ96LW4 560 aa11.95□□□□□ -0.5
CPNE1-218ENST00000439806 MKNK2Q9HBH9 465 aa11.95□□□□□ -0.5
CPNE1-218ENST00000439806 CD209Q9NNX6 404 aa11.95□□□□□ -0.5
CPNE1-218ENST00000439806 SRPRBQ9Y5M8 271 aaKnown RBP11.95□□□□□ -0.5
CPNE1-218ENST00000439806 MORC2Q9Y6X9 1032 aaPredicted RBP11.95□□□□□ -0.5
CPNE1-218ENST00000439806 ANKRD31Q8N7Z5 1873 aa11.94□□□□□ -0.5
CPNE1-218ENST00000439806 CBFA2T2O43439 604 aa11.94□□□□□ -0.5
CPNE1-218ENST00000439806 BBOX1O75936 387 aa11.94□□□□□ -0.5
CPNE1-218ENST00000439806 TSPY3P0CV98 308 aa11.94□□□□□ -0.5
CPNE1-218ENST00000439806 TSPY8P0CW00 308 aa11.94□□□□□ -0.5
CPNE1-218ENST00000439806 SCG2P13521 617 aa11.94□□□□□ -0.5
CPNE1-218ENST00000439806 PLCG2P16885 1265 aa11.94□□□□□ -0.5
CPNE1-218ENST00000439806 HSPA1LP34931 641 aa11.94□□□□□ -0.5
CPNE1-218ENST00000439806 BTDP43251 543 aa11.94□□□□□ -0.5
CPNE1-218ENST00000439806 GNAQP50148 359 aa11.94□□□□□ -0.5
CPNE1-218ENST00000439806 GSDMDP57764 484 aa11.94□□□□□ -0.5
CPNE1-218ENST00000439806 LRMPQ12912 555 aa11.94□□□□□ -0.5
CPNE1-218ENST00000439806 DHX8Q14562 1220 aaKnown RBP11.94□□□□□ -0.5
CPNE1-218ENST00000439806 POSTNQ15063 836 aa11.94□□□□□ -0.5
CPNE1-218ENST00000439806 DIXDC1Q155Q3 683 aa11.94□□□□□ -0.5
CPNE1-218ENST00000439806 CCDC144BQ3MJ40 725 aa11.94□□□□□ -0.5
CPNE1-218ENST00000439806 LONRF3Q496Y0 759 aa11.94□□□□□ -0.5
CPNE1-218ENST00000439806 CRY2Q49AN0 593 aa11.94□□□□□ -0.5
CPNE1-218ENST00000439806 TTC38Q5R3I4 469 aa11.94□□□□□ -0.5
CPNE1-218ENST00000439806 DGKHQ86XP1 1220 aa11.94□□□□□ -0.5
CPNE1-218ENST00000439806 SRBD1Q8N5C6 995 aaKnown RBP11.94□□□□□ -0.5
CPNE1-218ENST00000439806 TGFBRAP1Q8WUH2 860 aa11.94□□□□□ -0.5
CPNE1-218ENST00000439806 CACTINQ8WUQ7 758 aaKnown RBP11.94□□□□□ -0.5
CPNE1-218ENST00000439806 DYNLL2Q96FJ2 89 aa11.94□□□□□ -0.5
CPNE1-218ENST00000439806 ZNF287Q9HBT7 754 aa11.94□□□□□ -0.5
CPNE1-218ENST00000439806 IFNKQ9P0W0 207 aa11.94□□□□□ -0.5
CPNE1-218ENST00000439806 IMPACTQ9P2X3 320 aa11.94□□□□□ -0.5
CPNE1-218ENST00000439806 SERTAD1Q9UHV2 236 aa11.94□□□□□ -0.5
CPNE1-218ENST00000439806 DACH1Q9UI36 760 aa11.94□□□□□ -0.5
CPNE1-218ENST00000439806 FAM205CA6NFA0 338 aa11.93□□□□□ -0.5
CPNE1-218ENST00000439806 POLR2DO15514 142 aaKnown RBP11.93□□□□□ -0.5
CPNE1-218ENST00000439806 MYO1BO43795 1136 aa11.93□□□□□ -0.5
CPNE1-218ENST00000439806 NRDCO43847 1150 aa11.93□□□□□ -0.5
CPNE1-218ENST00000439806 CALML3P27482 149 aa11.93□□□□□ -0.5
CPNE1-218ENST00000439806 MYL5Q02045 173 aa11.93□□□□□ -0.5
CPNE1-218ENST00000439806 GRM4Q14833 912 aa11.93□□□□□ -0.5
CPNE1-218ENST00000439806 PFKFB3Q16875 520 aaPredicted RBP11.93□□□□□ -0.5
CPNE1-218ENST00000439806 TMC4Q7Z404 712 aa11.93□□□□□ -0.5
CPNE1-218ENST00000439806 FILIP1Q7Z7B0 1213 aa11.93□□□□□ -0.5
CPNE1-218ENST00000439806 SLC51AQ86UW1 340 aa11.93□□□□□ -0.5
CPNE1-218ENST00000439806 MAPKAPK5Q8IW41 473 aa11.93□□□□□ -0.5
CPNE1-218ENST00000439806 ANKS1AQ92625 1134 aa11.93□□□□□ -0.5
CPNE1-218ENST00000439806 SMARCE1Q969G3 411 aa11.93□□□□□ -0.5
CPNE1-218ENST00000439806 FERMT2Q96AC1 680 aa11.93□□□□□ -0.5
CPNE1-218ENST00000439806 SHISA4Q96DD7 197 aa11.93□□□□□ -0.5
CPNE1-218ENST00000439806 CRAMP1Q96RY5 1269 aa11.93□□□□□ -0.5
CPNE1-218ENST00000439806 RTFDC1Q9BY42 306 aaPredicted RBP11.93□□□□□ -0.5
CPNE1-218ENST00000439806 CSRNP2Q9H175 543 aa11.93□□□□□ -0.5
CPNE1-218ENST00000439806 QTRT2Q9H974 415 aaKnown RBP11.93□□□□□ -0.5
CPNE1-218ENST00000439806 SAP30BPQ9UHR5 308 aaKnown RBP11.93□□□□□ -0.5
CPNE1-218ENST00000439806 PCDHA5Q9Y5H7 936 aa11.93□□□□□ -0.5
CPNE1-218ENST00000439806 LTBP1Q14766 1721 aa11.92□□□□□ -0.5
CPNE1-218ENST00000439806 C6orf229H3BNL8 230 aa11.92□□□□□ -0.5
CPNE1-218ENST00000439806 DYNC1I1O14576 645 aa11.92□□□□□ -0.5
CPNE1-218ENST00000439806 PPEF1O14829 653 aaPredicted RBP11.92□□□□□ -0.5
CPNE1-218ENST00000439806 IL1R1P14778 569 aa11.92□□□□□ -0.5
CPNE1-218ENST00000439806 LMOD1P29536 600 aaPredicted RBP11.92□□□□□ -0.5
CPNE1-218ENST00000439806 FANCCQ00597 558 aa11.92□□□□□ -0.5
CPNE1-218ENST00000439806 GRIN1Q05586 938 aa11.92□□□□□ -0.5
CPNE1-218ENST00000439806 NCAPHQ15003 741 aa11.92□□□□□ -0.5
CPNE1-218ENST00000439806 ZNF174Q15697 407 aa11.92□□□□□ -0.5
CPNE1-218ENST00000439806 GRIK5Q16478 980 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms