RNA–Protein interactions for RNA: ENST00000433218.6

HOMER3-203, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,418 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-203ENST00000433218 PAK6Q9NQU5 681 aaPredicted RBP27.48■■□□□ 1.99
HOMER3-203ENST00000433218 RBPJLQ9UBG7 517 aa27.48■■□□□ 1.99
HOMER3-203ENST00000433218 C19orf81C9J6K1 198 aa27.47■■□□□ 1.99
HOMER3-203ENST00000433218 ABCB5Q2M3G0 1257 aa27.47■■□□□ 1.99
HOMER3-203ENST00000433218 CERKLQ49MI3 558 aaPredicted RBP27.47■■□□□ 1.99
HOMER3-203ENST00000433218 CERS3Q8IU89 383 aa27.47■■□□□ 1.99
HOMER3-203ENST00000433218 TRIB2Q92519 343 aa27.47■■□□□ 1.99
HOMER3-203ENST00000433218 FEZ1Q99689 392 aa27.47■■□□□ 1.99
HOMER3-203ENST00000433218 DCP1AQ9NPI6 582 aaPredicted RBP27.47■■□□□ 1.99
HOMER3-203ENST00000433218 GINM1Q9NU53 330 aa27.47■■□□□ 1.99
HOMER3-203ENST00000433218 RAB11FIP3O75154 756 aa27.46■■□□□ 1.99
HOMER3-203ENST00000433218 CNMDO75829 334 aa27.46■■□□□ 1.99
HOMER3-203ENST00000433218 FARP2O94887 1054 aaPredicted RBP27.46■■□□□ 1.99
HOMER3-203ENST00000433218 MBD4O95243 580 aa27.46■■□□□ 1.99
HOMER3-203ENST00000433218 USP17L2Q6R6M4 530 aa27.46■■□□□ 1.99
HOMER3-203ENST00000433218 CRNKL1Q9BZJ0 848 aaKnown RBP27.46■■□□□ 1.99
HOMER3-203ENST00000433218 MCM9Q9NXL9 1143 aa27.46■■□□□ 1.99
HOMER3-203ENST00000433218 CYP2D7A0A087X1C5 515 aa27.45■■□□□ 1.98
HOMER3-203ENST00000433218 SGPL1O95470 568 aa27.45■■□□□ 1.98
HOMER3-203ENST00000433218 POLR3DP05423 398 aaPredicted RBP27.45■■□□□ 1.98
HOMER3-203ENST00000433218 VCAM1P19320 739 aa27.45■■□□□ 1.98
HOMER3-203ENST00000433218 ADD2P35612 726 aa27.45■■□□□ 1.98
HOMER3-203ENST00000433218 SEPT2Q15019 361 aa27.45■■□□□ 1.98
HOMER3-203ENST00000433218 TSHZ3Q63HK5 1081 aa27.45■■□□□ 1.98
HOMER3-203ENST00000433218 TTC6Q86TZ1 520 aa27.45■■□□□ 1.98
HOMER3-203ENST00000433218 DIS3LQ8TF46 1054 aaKnown RBP27.45■■□□□ 1.98
HOMER3-203ENST00000433218 DYNLL2Q96FJ2 89 aa27.45■■□□□ 1.98
HOMER3-203ENST00000433218 C12orf42Q96LP6 360 aa27.45■■□□□ 1.98
HOMER3-203ENST00000433218 COLQQ9Y215 455 aaPredicted RBP27.45■■□□□ 1.98
HOMER3-203ENST00000433218 ATP5JP18859 108 aa27.44■■□□□ 1.98
HOMER3-203ENST00000433218 ERVK-9P63128 1117 aa27.44■■□□□ 1.98
HOMER3-203ENST00000433218 ERVK-24P63145 666 aa27.44■■□□□ 1.98
HOMER3-203ENST00000433218 NKX2-3Q8TAU0 364 aa27.44■■□□□ 1.98
HOMER3-203ENST00000433218 HAUS7Q99871 368 aa27.44■■□□□ 1.98
HOMER3-203ENST00000433218 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.44■■□□□ 1.98
HOMER3-203ENST00000433218 A0A1W2PRG0 241 aa27.43■■□□□ 1.98
HOMER3-203ENST00000433218 HMGCRP04035 888 aa27.43■■□□□ 1.98
HOMER3-203ENST00000433218 CYP2B6P20813 491 aa27.43■■□□□ 1.98
HOMER3-203ENST00000433218 SUPT16HQ9Y5B9 1047 aaKnown RBP27.43■■□□□ 1.98
HOMER3-203ENST00000433218 ZNFX1Q9P2E3 1918 aaKnown RBP27.43■■□□□ 1.98
HOMER3-203ENST00000433218 MYH4Q9Y623 1939 aa27.43■■□□□ 1.98
HOMER3-203ENST00000433218 CENPBP07199 599 aaPredicted RBP27.42■■□□□ 1.98
HOMER3-203ENST00000433218 KIAA1755Q5JYT7 1200 aa27.42■■□□□ 1.98
HOMER3-203ENST00000433218 GPRC5AQ8NFJ5 357 aa27.42■■□□□ 1.98
HOMER3-203ENST00000433218 ZNF236Q9UL36 1845 aa27.42■■□□□ 1.98
HOMER3-203ENST00000433218 TMED8Q6PL24 325 aaPredicted RBP27.41■■□□□ 1.98
HOMER3-203ENST00000433218 GCC1Q96CN9 775 aa27.41■■□□□ 1.98
HOMER3-203ENST00000433218 KIAA1683Q9H0B3 1180 aa27.41■■□□□ 1.98
HOMER3-203ENST00000433218 CCL14Q16627 93 aa27.41■■□□□ 1.98
HOMER3-203ENST00000433218 LRRCC1Q9C099 1032 aa27.41■■□□□ 1.98
HOMER3-203ENST00000433218 CRISPLD2Q9H0B8 497 aa27.41■■□□□ 1.98
HOMER3-203ENST00000433218 PCDH10Q9P2E7 1040 aa27.41■■□□□ 1.98
HOMER3-203ENST00000433218 GPR142Q7Z601 462 aa27.4■■□□□ 1.98
HOMER3-203ENST00000433218 DPF3Q92784 378 aa27.4■■□□□ 1.98
HOMER3-203ENST00000433218 LAMA2P24043 3122 aaKnown RBP27.39■■□□□ 1.98
HOMER3-203ENST00000433218 PLXNA1Q9UIW2 1896 aa27.39■■□□□ 1.98
HOMER3-203ENST00000433218 MPHOSPH10O00566 681 aaKnown RBP27.39■■□□□ 1.97
HOMER3-203ENST00000433218 FXR1P51114 621 aaKnown RBP eCLIP27.39■■□□□ 1.97
HOMER3-203ENST00000433218 USP6NLQ92738 828 aa27.39■■□□□ 1.97
HOMER3-203ENST00000433218 CHMP4BQ9H444 224 aaKnown RBP27.39■■□□□ 1.97
HOMER3-203ENST00000433218 RPAP3Q9H6T3 665 aaPredicted RBP27.39■■□□□ 1.97
HOMER3-203ENST00000433218 BTBD7Q9P203 1132 aa27.39■■□□□ 1.97
HOMER3-203ENST00000433218 SPDYE16A6NNV3 312 aaPredicted RBP27.38■■□□□ 1.97
HOMER3-203ENST00000433218 AKR1B1P15121 316 aa27.38■■□□□ 1.97
HOMER3-203ENST00000433218 MNX1P50219 401 aaPredicted RBP27.38■■□□□ 1.97
HOMER3-203ENST00000433218 CHRDL2Q6WN34 429 aa27.38■■□□□ 1.97
HOMER3-203ENST00000433218 CATSPERGQ6ZRH7 1159 aa27.38■■□□□ 1.97
HOMER3-203ENST00000433218 PUS7LQ9H0K6 701 aaKnown RBP27.38■■□□□ 1.97
HOMER3-203ENST00000433218 USP17L15C9J2P7 530 aa27.37■■□□□ 1.97
HOMER3-203ENST00000433218 USP17L13C9JLJ4 530 aa27.37■■□□□ 1.97
HOMER3-203ENST00000433218 USP17L11C9JVI0 530 aa27.37■■□□□ 1.97
HOMER3-203ENST00000433218 USP17L18D6R9N7 530 aa27.37■■□□□ 1.97
HOMER3-203ENST00000433218 USP17L22D6RA61 530 aa27.37■■□□□ 1.97
HOMER3-203ENST00000433218 USP17L17D6RBQ6 530 aa27.37■■□□□ 1.97
HOMER3-203ENST00000433218 USP17L19D6RCP7 530 aa27.37■■□□□ 1.97
HOMER3-203ENST00000433218 USP17L20D6RJB6 530 aa27.37■■□□□ 1.97
HOMER3-203ENST00000433218 TFRCP02786 760 aaKnown RBP27.37■■□□□ 1.97
HOMER3-203ENST00000433218 USP17L24Q0WX57 530 aa27.37■■□□□ 1.97
HOMER3-203ENST00000433218 MORN1Q5T089 497 aa27.37■■□□□ 1.97
HOMER3-203ENST00000433218 CABP5Q9NP86 173 aa27.37■■□□□ 1.97
HOMER3-203ENST00000433218 PRKAR2AP13861 404 aaKnown RBP27.36■■□□□ 1.97
HOMER3-203ENST00000433218 MAP3K21Q5TCX8 1036 aa27.36■■□□□ 1.97
HOMER3-203ENST00000433218 PAWRQ96IZ0 340 aaKnown RBP27.36■■□□□ 1.97
HOMER3-203ENST00000433218 NUDT12Q9BQG2 462 aa27.36■■□□□ 1.97
HOMER3-203ENST00000433218 USP14P54578 494 aa27.35■■□□□ 1.97
HOMER3-203ENST00000433218 SIAH1Q8IUQ4 282 aa27.35■■□□□ 1.97
HOMER3-203ENST00000433218 SOCS4Q8WXH5 440 aa27.35■■□□□ 1.97
HOMER3-203ENST00000433218 MAPK4P31152 587 aa27.34■■□□□ 1.97
HOMER3-203ENST00000433218 FLRT1Q9NZU1 646 aa27.34■■□□□ 1.97
HOMER3-203ENST00000433218 RPTORQ8N122 1335 aa27.34■■□□□ 1.97
HOMER3-203ENST00000433218 PLEKHH3Q7Z736 793 aa27.33■■□□□ 1.97
HOMER3-203ENST00000433218 RABGAP1Q9Y3P9 1069 aa27.33■■□□□ 1.97
HOMER3-203ENST00000433218 CCND3P30281 292 aaPredicted RBP27.33■■□□□ 1.96
HOMER3-203ENST00000433218 CACNB2Q08289 660 aaPredicted RBP27.33■■□□□ 1.96
HOMER3-203ENST00000433218 UBE3CQ15386 1083 aa27.33■■□□□ 1.96
HOMER3-203ENST00000433218 C12orf60Q5U649 245 aa27.33■■□□□ 1.96
HOMER3-203ENST00000433218 HTATIP2Q9BUP3 242 aa27.33■■□□□ 1.96
HOMER3-203ENST00000433218 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.33■■□□□ 1.96
HOMER3-203ENST00000433218 RBM27Q9P2N5 1060 aaKnown RBP27.33■■□□□ 1.96
HOMER3-203ENST00000433218 USP17L12C9JPN9 530 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms