RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 RASGRF1Q13972 1273 aa9.29□□□□□ -0.92
HMGB1P32-201ENST00000425971 TTLL4Q14679 1199 aa9.29□□□□□ -0.92
HMGB1P32-201ENST00000425971 ZYXQ15942 572 aaKnown RBP9.29□□□□□ -0.92
HMGB1P32-201ENST00000425971 ARSHQ5FYA8 562 aa9.29□□□□□ -0.92
HMGB1P32-201ENST00000425971 HID1Q8IV36 788 aa9.29□□□□□ -0.92
HMGB1P32-201ENST00000425971 TMEM130Q8N3G9 435 aa9.29□□□□□ -0.92
HMGB1P32-201ENST00000425971 TMEM87BQ96K49 555 aa9.29□□□□□ -0.92
HMGB1P32-201ENST00000425971 SLC9A7Q96T83 725 aa9.29□□□□□ -0.92
HMGB1P32-201ENST00000425971 FBRSQ9HAH7 460 aa9.29□□□□□ -0.92
HMGB1P32-201ENST00000425971 PICK1Q9NRD5 415 aa9.29□□□□□ -0.92
HMGB1P32-201ENST00000425971 NOP53Q9NZM5 478 aaKnown RBP9.29□□□□□ -0.92
HMGB1P32-201ENST00000425971 MADDQ8WXG6 1647 aa9.29□□□□□ -0.92
HMGB1P32-201ENST00000425971 EPRSP07814 1512 aaKnown RBP9.28□□□□□ -0.92
HMGB1P32-201ENST00000425971 ABCC2Q92887 1545 aa9.28□□□□□ -0.92
HMGB1P32-201ENST00000425971 B2RBV5 119 aa9.28□□□□□ -0.92
HMGB1P32-201ENST00000425971 GJB6O95452 261 aa9.28□□□□□ -0.92
HMGB1P32-201ENST00000425971 PRRT3Q5FWE3 981 aa9.28□□□□□ -0.92
HMGB1P32-201ENST00000425971 SLC6A19Q695T7 634 aa9.28□□□□□ -0.92
HMGB1P32-201ENST00000425971 UNC5AQ6ZN44 842 aa9.28□□□□□ -0.92
HMGB1P32-201ENST00000425971 UBE3DQ7Z6J8 389 aa9.28□□□□□ -0.92
HMGB1P32-201ENST00000425971 SLFN12Q8IYM2 578 aa9.28□□□□□ -0.92
HMGB1P32-201ENST00000425971 C2CD4AQ8NCU7 369 aaPredicted RBP9.28□□□□□ -0.92
HMGB1P32-201ENST00000425971 ZNF507Q8TCN5 953 aa9.28□□□□□ -0.92
HMGB1P32-201ENST00000425971 MRPL42Q9Y6G3 142 aaKnown RBP9.28□□□□□ -0.92
HMGB1P32-201ENST00000425971 LTBP3Q9NS15 1303 aa9.28□□□□□ -0.92
HMGB1P32-201ENST00000425971 CCDC85CA6NKD9 419 aa9.27□□□□□ -0.93
HMGB1P32-201ENST00000425971 PDPK1O15530 556 aa9.27□□□□□ -0.93
HMGB1P32-201ENST00000425971 DRD2P14416 443 aa9.27□□□□□ -0.93
HMGB1P32-201ENST00000425971 CAP2P40123 477 aa9.27□□□□□ -0.93
HMGB1P32-201ENST00000425971 NKG7Q16617 165 aa9.27□□□□□ -0.93
HMGB1P32-201ENST00000425971 SHISA2Q6UWI4 295 aa9.27□□□□□ -0.93
HMGB1P32-201ENST00000425971 C6orf15Q6UXA7 325 aaPredicted RBP9.27□□□□□ -0.93
HMGB1P32-201ENST00000425971 Q6ZS46 218 aa9.27□□□□□ -0.93
HMGB1P32-201ENST00000425971 AGGF1Q8N302 714 aaeCLIP9.27□□□□□ -0.93
HMGB1P32-201ENST00000425971 FAM13CQ8NE31 585 aa9.27□□□□□ -0.93
HMGB1P32-201ENST00000425971 ISL2Q96A47 359 aa9.27□□□□□ -0.93
HMGB1P32-201ENST00000425971 ACTL7BQ9Y614 415 aa9.27□□□□□ -0.93
HMGB1P32-201ENST00000425971 CUL7Q14999 1698 aa9.26□□□□□ -0.93
HMGB1P32-201ENST00000425971 YARSP54577 528 aaKnown RBP9.26□□□□□ -0.93
HMGB1P32-201ENST00000425971 ANKRD34AQ69YU3 496 aa9.26□□□□□ -0.93
HMGB1P32-201ENST00000425971 FDX2Q6P4F2 183 aa9.26□□□□□ -0.93
HMGB1P32-201ENST00000425971 FAM178BQ8IXR5 827 aa9.26□□□□□ -0.93
HMGB1P32-201ENST00000425971 KCT2Q8NC54 265 aa9.26□□□□□ -0.93
HMGB1P32-201ENST00000425971 RNPC3Q96LT9 517 aaKnown RBP9.26□□□□□ -0.93
HMGB1P32-201ENST00000425971 PHAXQ9H814 394 aaKnown RBP9.26□□□□□ -0.93
HMGB1P32-201ENST00000425971 HCLS1P14317 486 aaPredicted RBP9.25□□□□□ -0.93
HMGB1P32-201ENST00000425971 RAG1P15918 1043 aa9.25□□□□□ -0.93
HMGB1P32-201ENST00000425971 POLR2BP30876 1174 aaKnown RBP9.25□□□□□ -0.93
HMGB1P32-201ENST00000425971 SLBPQ14493 270 aaKnown RBP eCLIP9.25□□□□□ -0.93
HMGB1P32-201ENST00000425971 GRIK4Q16099 956 aa9.25□□□□□ -0.93
HMGB1P32-201ENST00000425971 MRM1Q6IN84 353 aaKnown RBP9.25□□□□□ -0.93
HMGB1P32-201ENST00000425971 DYMQ7RTS9 669 aa9.25□□□□□ -0.93
HMGB1P32-201ENST00000425971 C12orf50Q8NA57 414 aaPredicted RBP9.25□□□□□ -0.93
HMGB1P32-201ENST00000425971 FAM105AQ9NUU6 356 aa9.25□□□□□ -0.93
HMGB1P32-201ENST00000425971 RGS13O14921 159 aa9.24□□□□□ -0.93
HMGB1P32-201ENST00000425971 DDAH1O94760 285 aa9.24□□□□□ -0.93
HMGB1P32-201ENST00000425971 SPATA31C1P0DKV0 1188 aa9.24□□□□□ -0.93
HMGB1P32-201ENST00000425971 CCNFP41002 786 aa9.24□□□□□ -0.93
HMGB1P32-201ENST00000425971 EGFLAMQ63HQ2 1017 aa9.24□□□□□ -0.93
HMGB1P32-201ENST00000425971 LENG1Q96BZ8 264 aaPredicted RBP9.24□□□□□ -0.93
HMGB1P32-201ENST00000425971 KIAA0586Q9BVV6 1533 aa9.24□□□□□ -0.93
HMGB1P32-201ENST00000425971 MED1Q15648 1581 aaPredicted RBP9.24□□□□□ -0.93
HMGB1P32-201ENST00000425971 BCORL1Q5H9F3 1711 aa9.23□□□□□ -0.93
HMGB1P32-201ENST00000425971 ENPP3O14638 875 aa9.23□□□□□ -0.93
HMGB1P32-201ENST00000425971 CST3P01034 146 aaPredicted RBP9.23□□□□□ -0.93
HMGB1P32-201ENST00000425971 ASPAP45381 313 aa9.23□□□□□ -0.93
HMGB1P32-201ENST00000425971 PREPP48147 710 aa9.23□□□□□ -0.93
HMGB1P32-201ENST00000425971 IFRD2Q12894 506 aaPredicted RBP9.23□□□□□ -0.93
HMGB1P32-201ENST00000425971 NCAPHQ15003 741 aa9.23□□□□□ -0.93
HMGB1P32-201ENST00000425971 PODNQ7Z5L7 613 aa9.23□□□□□ -0.93
HMGB1P32-201ENST00000425971 LILRB2Q8N423 598 aa9.23□□□□□ -0.93
HMGB1P32-201ENST00000425971 DNAJC7Q99615 494 aa9.23□□□□□ -0.93
HMGB1P32-201ENST00000425971 AKTIPQ9H8T0 292 aa9.23□□□□□ -0.93
HMGB1P32-201ENST00000425971 PIDD1Q9HB75 910 aa9.23□□□□□ -0.93
HMGB1P32-201ENST00000425971 ADAMTS8Q9UP79 889 aa9.23□□□□□ -0.93
HMGB1P32-201ENST00000425971 CNTNAP5Q8WYK1 1306 aa9.23□□□□□ -0.93
HMGB1P32-201ENST00000425971 RIMS1Q86UR5 1692 aaKnown RBP9.23□□□□□ -0.93
HMGB1P32-201ENST00000425971 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.22□□□□□ -0.93
HMGB1P32-201ENST00000425971 ALX3O95076 343 aa9.22□□□□□ -0.93
HMGB1P32-201ENST00000425971 TCEAL1Q15170 157 aa9.22□□□□□ -0.93
HMGB1P32-201ENST00000425971 PRAMEF13Q5VWM6 474 aa9.22□□□□□ -0.93
HMGB1P32-201ENST00000425971 VHLLQ6RSH7 139 aa9.22□□□□□ -0.93
HMGB1P32-201ENST00000425971 CDC37L1Q7L3B6 337 aa9.22□□□□□ -0.93
HMGB1P32-201ENST00000425971 BEND7Q8N7W2 519 aaPredicted RBP9.22□□□□□ -0.93
HMGB1P32-201ENST00000425971 ST13P5Q8NFI4 369 aaPredicted RBP9.22□□□□□ -0.93
HMGB1P32-201ENST00000425971 KLHL6Q8WZ60 621 aa9.22□□□□□ -0.93
HMGB1P32-201ENST00000425971 DPH2Q9BQC3 489 aaPredicted RBP9.22□□□□□ -0.93
HMGB1P32-201ENST00000425971 ZNF214Q9UL59 606 aaPredicted RBP9.22□□□□□ -0.93
HMGB1P32-201ENST00000425971 TTBK1Q5TCY1 1321 aaPredicted RBP9.22□□□□□ -0.93
HMGB1P32-201ENST00000425971 FAM86C2PA6NEL3 165 aa9.21□□□□□ -0.94
HMGB1P32-201ENST00000425971 UBOX5O94941 541 aa9.21□□□□□ -0.94
HMGB1P32-201ENST00000425971 HSD3B2P26439 372 aa9.21□□□□□ -0.94
HMGB1P32-201ENST00000425971 COL8A1P27658 744 aa9.21□□□□□ -0.94
HMGB1P32-201ENST00000425971 SMYD4Q8IYR2 804 aaPredicted RBP9.21□□□□□ -0.94
HMGB1P32-201ENST00000425971 PHACTR4Q8IZ21 702 aa9.21□□□□□ -0.94
HMGB1P32-201ENST00000425971 CYB5D2Q8WUJ1 264 aa9.21□□□□□ -0.94
HMGB1P32-201ENST00000425971 ZNF669Q96BR6 464 aaPredicted RBP9.21□□□□□ -0.94
HMGB1P32-201ENST00000425971 KIF2CQ99661 725 aa9.21□□□□□ -0.94
HMGB1P32-201ENST00000425971 ACSS3Q9H6R3 686 aa9.21□□□□□ -0.94
HMGB1P32-201ENST00000425971 PCDHB10Q9UN67 800 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms