RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 ADD2P35612 726 aa11.41□□□□□ -0.58
NUP50-205ENST00000419387 HERVK_113P62684 666 aa11.41□□□□□ -0.58
NUP50-205ENST00000419387 RAB3GAP1Q15042 981 aa11.41□□□□□ -0.58
NUP50-205ENST00000419387 ABCB5Q2M3G0 1257 aa11.41□□□□□ -0.58
NUP50-205ENST00000419387 LCORLQ8N3X6 602 aa11.41□□□□□ -0.58
NUP50-205ENST00000419387 GPRC5AQ8NFJ5 357 aa11.41□□□□□ -0.58
NUP50-205ENST00000419387 HAUS7Q99871 368 aa11.41□□□□□ -0.58
NUP50-205ENST00000419387 UNC93B1Q9H1C4 597 aa11.41□□□□□ -0.58
NUP50-205ENST00000419387 MCM9Q9NXL9 1143 aa11.41□□□□□ -0.58
NUP50-205ENST00000419387 GJD2Q9UKL4 321 aa11.41□□□□□ -0.58
NUP50-205ENST00000419387 TAOK2Q9UL54 1235 aa11.41□□□□□ -0.58
NUP50-205ENST00000419387 SMARCA5O60264 1052 aaPredicted RBP11.4□□□□□ -0.58
NUP50-205ENST00000419387 SGPL1O95470 568 aa11.4□□□□□ -0.58
NUP50-205ENST00000419387 CAPN2P17655 700 aa11.4□□□□□ -0.58
NUP50-205ENST00000419387 USP14P54578 494 aa11.4□□□□□ -0.58
NUP50-205ENST00000419387 GABPAQ06546 454 aa11.4□□□□□ -0.58
NUP50-205ENST00000419387 U2AF1L4Q8WU68 220 aaKnown RBP11.4□□□□□ -0.58
NUP50-205ENST00000419387 GTF3C2Q8WUA4 911 aaPredicted RBP11.4□□□□□ -0.58
NUP50-205ENST00000419387 SDR42E1Q8WUS8 393 aa11.4□□□□□ -0.58
NUP50-205ENST00000419387 C12orf42Q96LP6 360 aa11.4□□□□□ -0.58
NUP50-205ENST00000419387 PHF12Q96QT6 1004 aa11.4□□□□□ -0.58
NUP50-205ENST00000419387 FEZ1Q99689 392 aa11.4□□□□□ -0.58
NUP50-205ENST00000419387 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.4□□□□□ -0.58
NUP50-205ENST00000419387 KIAA1683Q9H0B3 1180 aa11.4□□□□□ -0.58
NUP50-205ENST00000419387 ARMT1Q9H993 441 aa11.4□□□□□ -0.58
NUP50-205ENST00000419387 TXNRD2Q9NNW7 524 aa11.4□□□□□ -0.58
NUP50-205ENST00000419387 DCP1AQ9NPI6 582 aaPredicted RBP11.4□□□□□ -0.58
NUP50-205ENST00000419387 RBPJLQ9UBG7 517 aa11.4□□□□□ -0.58
NUP50-205ENST00000419387 USP17L15C9J2P7 530 aa11.39□□□□□ -0.59
NUP50-205ENST00000419387 USP17L13C9JLJ4 530 aa11.39□□□□□ -0.59
NUP50-205ENST00000419387 USP17L11C9JVI0 530 aa11.39□□□□□ -0.59
NUP50-205ENST00000419387 USP17L18D6R9N7 530 aa11.39□□□□□ -0.59
NUP50-205ENST00000419387 USP17L22D6RA61 530 aa11.39□□□□□ -0.59
NUP50-205ENST00000419387 USP17L17D6RBQ6 530 aa11.39□□□□□ -0.59
NUP50-205ENST00000419387 USP17L19D6RCP7 530 aa11.39□□□□□ -0.59
NUP50-205ENST00000419387 USP17L20D6RJB6 530 aa11.39□□□□□ -0.59
NUP50-205ENST00000419387 PEX10O60683 326 aa11.39□□□□□ -0.59
NUP50-205ENST00000419387 GUCY1A2P33402 732 aa11.39□□□□□ -0.59
NUP50-205ENST00000419387 USP17L24Q0WX57 530 aa11.39□□□□□ -0.59
NUP50-205ENST00000419387 ZYXQ15942 572 aaKnown RBP11.39□□□□□ -0.59
NUP50-205ENST00000419387 Q3C1V9 767 aa11.39□□□□□ -0.59
NUP50-205ENST00000419387 SLFNL1Q499Z3 407 aa11.39□□□□□ -0.59
NUP50-205ENST00000419387 CATSPERGQ6ZRH7 1159 aa11.39□□□□□ -0.59
NUP50-205ENST00000419387 DOCK3Q8IZD9 2030 aa11.39□□□□□ -0.59
NUP50-205ENST00000419387 ACER1Q8TDN7 264 aa11.39□□□□□ -0.59
NUP50-205ENST00000419387 ATP8A2Q9NTI2 1148 aa11.39□□□□□ -0.59
NUP50-205ENST00000419387 BRCA2P51587 3418 aa11.38□□□□□ -0.59
NUP50-205ENST00000419387 PRKAB2O43741 272 aa11.38□□□□□ -0.59
NUP50-205ENST00000419387 MBD4O95243 580 aa11.38□□□□□ -0.59
NUP50-205ENST00000419387 TFRCP02786 760 aaKnown RBP11.38□□□□□ -0.59
NUP50-205ENST00000419387 MAPK4P31152 587 aa11.38□□□□□ -0.59
NUP50-205ENST00000419387 ERVK-9P63128 1117 aa11.38□□□□□ -0.59
NUP50-205ENST00000419387 ERVK-24P63145 666 aa11.38□□□□□ -0.59
NUP50-205ENST00000419387 SEPT2Q15019 361 aa11.38□□□□□ -0.59
NUP50-205ENST00000419387 UBE3CQ15386 1083 aa11.38□□□□□ -0.59
NUP50-205ENST00000419387 ZSCAN25Q6NSZ9 544 aa11.38□□□□□ -0.59
NUP50-205ENST00000419387 POTEEQ6S8J3 1075 aa11.38□□□□□ -0.59
NUP50-205ENST00000419387 UBE2Q1Q7Z7E8 422 aa11.38□□□□□ -0.59
NUP50-205ENST00000419387 DPF3Q92784 378 aa11.38□□□□□ -0.59
NUP50-205ENST00000419387 DEFB118Q96PH6 123 aa11.38□□□□□ -0.59
NUP50-205ENST00000419387 NUDT12Q9BQG2 462 aa11.38□□□□□ -0.59
NUP50-205ENST00000419387 PAGR1Q9BTK6 254 aa11.38□□□□□ -0.59
NUP50-205ENST00000419387 DCTPP1Q9H773 170 aa11.38□□□□□ -0.59
NUP50-205ENST00000419387 PAK6Q9NQU5 681 aaPredicted RBP11.38□□□□□ -0.59
NUP50-205ENST00000419387 SWAP70Q9UH65 585 aa11.38□□□□□ -0.59
NUP50-205ENST00000419387 MPHOSPH10O00566 681 aaKnown RBP11.37□□□□□ -0.59
NUP50-205ENST00000419387 HMGCRP04035 888 aa11.37□□□□□ -0.59
NUP50-205ENST00000419387 CHGBP05060 677 aa11.37□□□□□ -0.59
NUP50-205ENST00000419387 CYP2D6P10635 497 aa11.37□□□□□ -0.59
NUP50-205ENST00000419387 VCAM1P19320 739 aa11.37□□□□□ -0.59
NUP50-205ENST00000419387 MNX1P50219 401 aaPredicted RBP11.37□□□□□ -0.59
NUP50-205ENST00000419387 CCAR1Q8IX12 1150 aaKnown RBP11.37□□□□□ -0.59
NUP50-205ENST00000419387 DYNLL2Q96FJ2 89 aa11.37□□□□□ -0.59
NUP50-205ENST00000419387 HTATIP2Q9BUP3 242 aa11.37□□□□□ -0.59
NUP50-205ENST00000419387 PORCNQ9H237 461 aa11.37□□□□□ -0.59
NUP50-205ENST00000419387 ECHDC1Q9NTX5 307 aa11.37□□□□□ -0.59
NUP50-205ENST00000419387 RABGAP1Q9Y3P9 1069 aa11.37□□□□□ -0.59
NUP50-205ENST00000419387 RPTORQ8N122 1335 aa11.36□□□□□ -0.59
NUP50-205ENST00000419387 MKI67P46013 3256 aaKnown RBP11.36□□□□□ -0.59
NUP50-205ENST00000419387 CNMDO75829 334 aa11.36□□□□□ -0.59
NUP50-205ENST00000419387 FARP2O94887 1054 aaPredicted RBP11.36□□□□□ -0.59
NUP50-205ENST00000419387 XRCC5P13010 732 aaKnown RBP11.36□□□□□ -0.59
NUP50-205ENST00000419387 CYP2B6P20813 491 aa11.36□□□□□ -0.59
NUP50-205ENST00000419387 HABP4Q5JVS0 413 aaKnown RBP11.36□□□□□ -0.59
NUP50-205ENST00000419387 C12orf60Q5U649 245 aa11.36□□□□□ -0.59
NUP50-205ENST00000419387 GPR142Q7Z601 462 aa11.36□□□□□ -0.59
NUP50-205ENST00000419387 PLEKHH3Q7Z736 793 aa11.36□□□□□ -0.59
NUP50-205ENST00000419387 SLC44A5Q8NCS7 719 aa11.36□□□□□ -0.59
NUP50-205ENST00000419387 SOCS4Q8WXH5 440 aa11.36□□□□□ -0.59
NUP50-205ENST00000419387 DDRGK1Q96HY6 314 aa11.36□□□□□ -0.59
NUP50-205ENST00000419387 CRISPLD2Q9H0B8 497 aa11.36□□□□□ -0.59
NUP50-205ENST00000419387 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.36□□□□□ -0.59
NUP50-205ENST00000419387 PUS7LQ9H0K6 701 aaKnown RBP11.36□□□□□ -0.59
NUP50-205ENST00000419387 HMX1Q9NP08 348 aaPredicted RBP11.36□□□□□ -0.59
NUP50-205ENST00000419387 SLC4A4Q9Y6R1 1079 aa11.36□□□□□ -0.59
NUP50-205ENST00000419387 DDX60LQ5H9U9 1706 aaKnown RBP11.35□□□□□ -0.59
NUP50-205ENST00000419387 CYP2D7A0A087X1C5 515 aa11.35□□□□□ -0.59
NUP50-205ENST00000419387 A0A1W2PRG0 241 aa11.35□□□□□ -0.59
NUP50-205ENST00000419387 USP17L12C9JPN9 530 aa11.35□□□□□ -0.59
NUP50-205ENST00000419387 USP17L21D6R901 530 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms