RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 CCDC121Q6ZUS5 278 aa14.37□□□□□ -0.11
HERC3-203ENST00000407637 CCDC50Q8IVM0 306 aa14.37□□□□□ -0.11
HERC3-203ENST00000407637 CCDC26Q8TAB7 109 aa14.37□□□□□ -0.11
HERC3-203ENST00000407637 MAGEC3Q8TD91 643 aa14.37□□□□□ -0.11
HERC3-203ENST00000407637 NUDT16Q96DE0 195 aaKnown RBP14.37□□□□□ -0.11
HERC3-203ENST00000407637 CCDC51Q96ER9 411 aa14.37□□□□□ -0.11
HERC3-203ENST00000407637 RPGRIP1Q96KN7 1286 aa14.37□□□□□ -0.11
HERC3-203ENST00000407637 GNAT3A8MTJ3 354 aa14.37□□□□□ -0.11
HERC3-203ENST00000407637 WASLO00401 505 aaPredicted RBP14.37□□□□□ -0.11
HERC3-203ENST00000407637 HSF2BPO75031 334 aa14.37□□□□□ -0.11
HERC3-203ENST00000407637 KRT14P02533 472 aa14.37□□□□□ -0.11
HERC3-203ENST00000407637 SLC8A3P57103 927 aa14.37□□□□□ -0.11
HERC3-203ENST00000407637 MED1Q15648 1581 aaPredicted RBP14.37□□□□□ -0.11
HERC3-203ENST00000407637 CDCA2Q69YH5 1023 aaPredicted RBP14.37□□□□□ -0.11
HERC3-203ENST00000407637 RCSD1Q6JBY9 416 aa14.37□□□□□ -0.11
HERC3-203ENST00000407637 KLHL10Q6JEL2 608 aa14.37□□□□□ -0.11
HERC3-203ENST00000407637 LMBR1Q8WVP7 490 aa14.37□□□□□ -0.11
HERC3-203ENST00000407637 THOC1Q96FV9 657 aaKnown RBP14.37□□□□□ -0.11
HERC3-203ENST00000407637 AIFM3Q96NN9 605 aa14.37□□□□□ -0.11
HERC3-203ENST00000407637 SEC31BQ9NQW1 1179 aa14.37□□□□□ -0.11
HERC3-203ENST00000407637 TMEM131LA2VDJ0 1609 aa14.36□□□□□ -0.11
HERC3-203ENST00000407637 PPP1R37O75864 691 aa14.36□□□□□ -0.11
HERC3-203ENST00000407637 TTC39AQ5SRH9 613 aa14.36□□□□□ -0.11
HERC3-203ENST00000407637 PAPD7Q5XG87 772 aaKnown RBP14.36□□□□□ -0.11
HERC3-203ENST00000407637 KDM7AQ6ZMT4 941 aa14.36□□□□□ -0.11
HERC3-203ENST00000407637 DDX46Q7L014 1031 aaKnown RBP14.36□□□□□ -0.11
HERC3-203ENST00000407637 IL17REQ8NFR9 667 aa14.36□□□□□ -0.11
HERC3-203ENST00000407637 BORCS6Q96GS4 357 aa14.36□□□□□ -0.11
HERC3-203ENST00000407637 RSRC1Q96IZ7 334 aaKnown RBP14.36□□□□□ -0.11
HERC3-203ENST00000407637 ENO4A6NNW6 628 aa14.36□□□□□ -0.11
HERC3-203ENST00000407637 GOLGA8BA8MQT2 603 aa14.36□□□□□ -0.11
HERC3-203ENST00000407637 CCT6AP40227 531 aaKnown RBP14.36□□□□□ -0.11
HERC3-203ENST00000407637 DRP2Q13474 957 aa14.36□□□□□ -0.11
HERC3-203ENST00000407637 CWF19L2Q2TBE0 894 aaKnown RBP14.36□□□□□ -0.11
HERC3-203ENST00000407637 C6orf89Q6UWU4 347 aa14.36□□□□□ -0.11
HERC3-203ENST00000407637 UBE3BQ7Z3V4 1068 aa14.36□□□□□ -0.11
HERC3-203ENST00000407637 TICAM2Q86XR7 235 aa14.36□□□□□ -0.11
HERC3-203ENST00000407637 VPS37DQ86XT2 251 aa14.36□□□□□ -0.11
HERC3-203ENST00000407637 RASSF8Q8NHQ8 419 aa14.36□□□□□ -0.11
HERC3-203ENST00000407637 CHP1Q99653 195 aa14.36□□□□□ -0.11
HERC3-203ENST00000407637 ACTR5Q9H9F9 607 aaPredicted RBP14.36□□□□□ -0.11
HERC3-203ENST00000407637 BSDC1Q9NW68 430 aaPredicted RBP14.36□□□□□ -0.11
HERC3-203ENST00000407637 OVOS2A0A0G2JMS6 1433 aa14.35□□□□□ -0.11
HERC3-203ENST00000407637 OVOS2A0A0J9YW53 1432 aa14.35□□□□□ -0.11
HERC3-203ENST00000407637 OVOS2Q6IE36 1432 aa14.35□□□□□ -0.11
HERC3-203ENST00000407637 DNM1LO00429 736 aa14.35□□□□□ -0.11
HERC3-203ENST00000407637 SLC8A1P32418 973 aa14.35□□□□□ -0.11
HERC3-203ENST00000407637 KCNB1Q14721 858 aa14.35□□□□□ -0.11
HERC3-203ENST00000407637 NBPF9Q3BBW0 867 aa14.35□□□□□ -0.11
HERC3-203ENST00000407637 TTLL7Q6ZT98 887 aa14.35□□□□□ -0.11
HERC3-203ENST00000407637 MAB21L3Q8N8X9 362 aa14.35□□□□□ -0.11
HERC3-203ENST00000407637 TBC1D31Q96DN5 1066 aa14.35□□□□□ -0.11
HERC3-203ENST00000407637 SUCLG2Q96I99 432 aa14.35□□□□□ -0.11
HERC3-203ENST00000407637 ZIM3Q96PE6 472 aa14.35□□□□□ -0.11
HERC3-203ENST00000407637 NUP88Q99567 741 aaPredicted RBP14.35□□□□□ -0.11
HERC3-203ENST00000407637 DMGDHQ9UI17 866 aaKnown RBP14.35□□□□□ -0.11
HERC3-203ENST00000407637 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.35□□□□□ -0.11
HERC3-203ENST00000407637 RIMBP3CA6NJZ7 1639 aa14.35□□□□□ -0.11
HERC3-203ENST00000407637 RIMBP3BA6NNM3 1639 aa14.35□□□□□ -0.11
HERC3-203ENST00000407637 RIMBP3Q9UFD9 1639 aa14.35□□□□□ -0.11
HERC3-203ENST00000407637 SYNRGQ9UMZ2 1314 aa14.35□□□□□ -0.11
HERC3-203ENST00000407637 E7EVH7 732 aa14.35□□□□□ -0.11
HERC3-203ENST00000407637 ITFG2Q969R8 447 aa14.35□□□□□ -0.11
HERC3-203ENST00000407637 MAP3K14Q99558 947 aa14.35□□□□□ -0.11
HERC3-203ENST00000407637 SERTAD1Q9UHV2 236 aa14.35□□□□□ -0.11
HERC3-203ENST00000407637 RIPOR2Q9Y4F9 1068 aa14.35□□□□□ -0.11
HERC3-203ENST00000407637 CPLX1O14810 134 aa14.34□□□□□ -0.11
HERC3-203ENST00000407637 SLC7A5Q01650 507 aa14.34□□□□□ -0.11
HERC3-203ENST00000407637 PPARDQ03181 441 aa14.34□□□□□ -0.11
HERC3-203ENST00000407637 ANKRD24Q8TF21 1146 aa14.34□□□□□ -0.11
HERC3-203ENST00000407637 OSBPL7Q9BZF2 842 aa14.34□□□□□ -0.11
HERC3-203ENST00000407637 CPSF2Q9P2I0 782 aaKnown RBP14.34□□□□□ -0.11
HERC3-203ENST00000407637 KDRP35968 1356 aa14.34□□□□□ -0.11
HERC3-203ENST00000407637 KLF18A0A0U1RQI7 1052 aa14.34□□□□□ -0.11
HERC3-203ENST00000407637 POLR2DO15514 142 aaKnown RBP14.34□□□□□ -0.11
HERC3-203ENST00000407637 ATP2C2O75185 946 aa14.34□□□□□ -0.11
HERC3-203ENST00000407637 SNUPNO95149 360 aaKnown RBP14.34□□□□□ -0.11
HERC3-203ENST00000407637 NDUFA10O95299 355 aa14.34□□□□□ -0.11
HERC3-203ENST00000407637 FAM107AO95990 144 aa14.34□□□□□ -0.11
HERC3-203ENST00000407637 RWDD2BP57060 319 aa14.34□□□□□ -0.11
HERC3-203ENST00000407637 FILIP1LQ4L180 1135 aa14.34□□□□□ -0.11
HERC3-203ENST00000407637 CCDC122Q5T0U0 273 aa14.34□□□□□ -0.11
HERC3-203ENST00000407637 NT5DC1Q5TFE4 455 aa14.34□□□□□ -0.11
HERC3-203ENST00000407637 ALS2CLQ60I27 953 aa14.34□□□□□ -0.11
HERC3-203ENST00000407637 CCDC70Q6NSX1 233 aa14.34□□□□□ -0.11
HERC3-203ENST00000407637 CYFIP2Q96F07 1278 aa14.34□□□□□ -0.11
HERC3-203ENST00000407637 KAZALD1Q96I82 304 aa14.34□□□□□ -0.11
HERC3-203ENST00000407637 LRRC1Q9BTT6 524 aa14.34□□□□□ -0.11
HERC3-203ENST00000407637 SLC39A2Q9NP94 309 aa14.34□□□□□ -0.11
HERC3-203ENST00000407637 IRAK4Q9NWZ3 460 aa14.34□□□□□ -0.11
HERC3-203ENST00000407637 DBNLQ9UJU6 430 aaKnown RBP14.34□□□□□ -0.11
HERC3-203ENST00000407637 ANKARQ7Z5J8 1434 aa14.34□□□□□ -0.11
HERC3-203ENST00000407637 ANKRD18BA2A2Z9 1011 aa14.33□□□□□ -0.11
HERC3-203ENST00000407637 CAND2O75155 1236 aa14.33□□□□□ -0.11
HERC3-203ENST00000407637 NR1D1P20393 614 aa14.33□□□□□ -0.11
HERC3-203ENST00000407637 SARSP49591 514 aaKnown RBP14.33□□□□□ -0.11
HERC3-203ENST00000407637 GRIN1Q05586 938 aa14.33□□□□□ -0.11
HERC3-203ENST00000407637 PPARAQ07869 468 aa14.33□□□□□ -0.11
HERC3-203ENST00000407637 ANKRD20A8PQ5CZ79 823 aa14.33□□□□□ -0.11
HERC3-203ENST00000407637 SPDYE1Q8NFV5 336 aaPredicted RBP14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms