RNA–Protein interactions for RNA: ENST00000401447.1

RPA3-203, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 414 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-203ENST00000401447 CRKP46108 304 aa5.8□□□□□ -1.48
RPA3-203ENST00000401447 ZNF165P49910 485 aa5.8□□□□□ -1.48
RPA3-203ENST00000401447 IFI16Q16666 785 aaKnown RBP5.8□□□□□ -1.48
RPA3-203ENST00000401447 TMEM201Q5SNT2 666 aa5.8□□□□□ -1.48
RPA3-203ENST00000401447 NT5DC4Q86YG4 428 aa5.8□□□□□ -1.48
RPA3-203ENST00000401447 ZNF654Q8IZM8 581 aa5.8□□□□□ -1.48
RPA3-203ENST00000401447 STK11IPQ8N1F8 1099 aa5.8□□□□□ -1.48
RPA3-203ENST00000401447 NETO1Q8TDF5 533 aa5.8□□□□□ -1.48
RPA3-203ENST00000401447 CYB5D2Q8WUJ1 264 aa5.8□□□□□ -1.48
RPA3-203ENST00000401447 NT5C1AQ9BXI3 368 aa5.8□□□□□ -1.48
RPA3-203ENST00000401447 BRMS1Q9HCU9 246 aa5.8□□□□□ -1.48
RPA3-203ENST00000401447 PCDHB14Q9Y5E9 798 aa5.8□□□□□ -1.48
RPA3-203ENST00000401447 ZNF608Q9ULD9 1512 aaPredicted RBP5.79□□□□□ -1.48
RPA3-203ENST00000401447 IGF2BP3O00425 579 aaKnown RBP eCLIP5.79□□□□□ -1.48
RPA3-203ENST00000401447 EOMESO95936 686 aa5.79□□□□□ -1.48
RPA3-203ENST00000401447 CHMP4BP1P59074 171 aa5.79□□□□□ -1.48
RPA3-203ENST00000401447 HDLBPQ00341 1268 aaKnown RBP5.79□□□□□ -1.48
RPA3-203ENST00000401447 SFRP5Q5T4F7 317 aa5.79□□□□□ -1.48
RPA3-203ENST00000401447 PHACTR4Q8IZ21 702 aa5.79□□□□□ -1.48
RPA3-203ENST00000401447 PLD6Q8N2A8 252 aaKnown RBP5.79□□□□□ -1.48
RPA3-203ENST00000401447 NKD1Q969G9 470 aa5.79□□□□□ -1.48
RPA3-203ENST00000401447 MISP3Q96FF7 219 aa5.79□□□□□ -1.48
RPA3-203ENST00000401447 COX4I2Q96KJ9 171 aa5.79□□□□□ -1.48
RPA3-203ENST00000401447 DDX41Q9UJV9 622 aaKnown RBP5.79□□□□□ -1.48
RPA3-203ENST00000401447 FAM155AB1AL88 458 aaPredicted RBP5.78□□□□□ -1.48
RPA3-203ENST00000401447 WNT11O96014 354 aa5.78□□□□□ -1.48
RPA3-203ENST00000401447 PRNPP04156 253 aa5.78□□□□□ -1.48
RPA3-203ENST00000401447 TNNI2P48788 182 aa5.78□□□□□ -1.48
RPA3-203ENST00000401447 OXCT1P55809 520 aa5.78□□□□□ -1.48
RPA3-203ENST00000401447 GK5Q6ZS86 529 aa5.78□□□□□ -1.48
RPA3-203ENST00000401447 METTL16Q86W50 562 aaKnown RBP5.78□□□□□ -1.48
RPA3-203ENST00000401447 SLFN12Q8IYM2 578 aa5.78□□□□□ -1.48
RPA3-203ENST00000401447 MFSD4AQ8N468 514 aa5.78□□□□□ -1.48
RPA3-203ENST00000401447 FLCNQ8NFG4 579 aa5.78□□□□□ -1.48
RPA3-203ENST00000401447 ZNF428Q96B54 188 aa5.78□□□□□ -1.48
RPA3-203ENST00000401447 HEXIM2Q96MH2 286 aaKnown RBP5.78□□□□□ -1.48
RPA3-203ENST00000401447 CCSER2Q9H7U1 834 aa5.78□□□□□ -1.48
RPA3-203ENST00000401447 GMIPQ9P107 970 aa5.78□□□□□ -1.48
RPA3-203ENST00000401447 URB2Q14146 1524 aaKnown RBP5.78□□□□□ -1.48
RPA3-203ENST00000401447 TMEM265A0A087WTH1 108 aa5.77□□□□□ -1.49
RPA3-203ENST00000401447 C9orf131Q5VYM1 1079 aa5.77□□□□□ -1.49
RPA3-203ENST00000401447 SLITRK4Q8IW52 837 aa5.77□□□□□ -1.49
RPA3-203ENST00000401447 REXO1Q8N1G1 1221 aaKnown RBP5.77□□□□□ -1.49
RPA3-203ENST00000401447 EAF1Q96JC9 268 aaPredicted RBP5.77□□□□□ -1.49
RPA3-203ENST00000401447 HRASLS5Q96KN8 279 aa5.77□□□□□ -1.49
RPA3-203ENST00000401447 SPATA32Q96LK8 384 aa5.77□□□□□ -1.49
RPA3-203ENST00000401447 FBXL18Q96ME1 805 aa5.77□□□□□ -1.49
RPA3-203ENST00000401447 FMNL2Q96PY5 1086 aa5.77□□□□□ -1.49
RPA3-203ENST00000401447 CCDC39Q9UFE4 941 aa5.77□□□□□ -1.49
RPA3-203ENST00000401447 SLC5A6Q9Y289 635 aa5.77□□□□□ -1.49
RPA3-203ENST00000401447 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.77□□□□□ -1.49
RPA3-203ENST00000401447 BTBD11A6QL63 1104 aa5.76□□□□□ -1.49
RPA3-203ENST00000401447 UPK3BL1B0FP48 263 aa5.76□□□□□ -1.49
RPA3-203ENST00000401447 UPK3BL2E5RIL1 263 aa5.76□□□□□ -1.49
RPA3-203ENST00000401447 ATE1O95260 518 aa5.76□□□□□ -1.49
RPA3-203ENST00000401447 IMPDH2P12268 514 aa5.76□□□□□ -1.49
RPA3-203ENST00000401447 RAG1P15918 1043 aa5.76□□□□□ -1.49
RPA3-203ENST00000401447 TCF3P15923 654 aa5.76□□□□□ -1.49
RPA3-203ENST00000401447 KIR3DL1P43629 444 aa5.76□□□□□ -1.49
RPA3-203ENST00000401447 CLCN7P51798 805 aa5.76□□□□□ -1.49
RPA3-203ENST00000401447 RACK1P63244 317 aaKnown RBP5.76□□□□□ -1.49
RPA3-203ENST00000401447 LRRFIP1Q32MZ4 808 aaKnown RBP5.76□□□□□ -1.49
RPA3-203ENST00000401447 C22orf34Q6ZV56 151 aa5.76□□□□□ -1.49
RPA3-203ENST00000401447 CDH24Q86UP0 819 aa5.76□□□□□ -1.49
RPA3-203ENST00000401447 FERD3LQ96RJ6 166 aa5.76□□□□□ -1.49
RPA3-203ENST00000401447 EHMT1Q9H9B1 1298 aa5.76□□□□□ -1.49
RPA3-203ENST00000401447 U3KQE9 123 aa5.76□□□□□ -1.49
RPA3-203ENST00000401447 CHD1O14646 1710 aa5.76□□□□□ -1.49
RPA3-203ENST00000401447 CBX7O95931 251 aa5.75□□□□□ -1.49
RPA3-203ENST00000401447 ZNF865P0CJ78 1059 aaPredicted RBP5.75□□□□□ -1.49
RPA3-203ENST00000401447 GBP1P32455 592 aa5.75□□□□□ -1.49
RPA3-203ENST00000401447 GP2P55259 537 aaKnown RBP5.75□□□□□ -1.49
RPA3-203ENST00000401447 PRKCQQ04759 706 aa5.75□□□□□ -1.49
RPA3-203ENST00000401447 PAK2Q13177 524 aa5.75□□□□□ -1.49
RPA3-203ENST00000401447 ARSHQ5FYA8 562 aa5.75□□□□□ -1.49
RPA3-203ENST00000401447 OVOS1Q6IE37 1185 aa5.75□□□□□ -1.49
RPA3-203ENST00000401447 FAM214BQ7L5A3 538 aa5.75□□□□□ -1.49
RPA3-203ENST00000401447 SPACA3Q8IXA5 215 aa5.75□□□□□ -1.49
RPA3-203ENST00000401447 TP53INP2Q8IXH6 220 aa5.75□□□□□ -1.49
RPA3-203ENST00000401447 AGBL5Q8NDL9 886 aa5.75□□□□□ -1.49
RPA3-203ENST00000401447 DNAJB8Q8NHS0 232 aa5.75□□□□□ -1.49
RPA3-203ENST00000401447 RIN3Q8TB24 985 aa5.75□□□□□ -1.49
RPA3-203ENST00000401447 BCL7CQ8WUZ0 217 aaPredicted RBP5.75□□□□□ -1.49
RPA3-203ENST00000401447 GPRASP2Q96D09 838 aa5.75□□□□□ -1.49
RPA3-203ENST00000401447 CCDC74BQ96LY2 380 aa5.75□□□□□ -1.49
RPA3-203ENST00000401447 TGIF2Q9GZN2 237 aa5.75□□□□□ -1.49
RPA3-203ENST00000401447 CEP131Q9UPN4 1083 aa5.75□□□□□ -1.49
RPA3-203ENST00000401447 SNX11Q9Y5W9 270 aa5.75□□□□□ -1.49
RPA3-203ENST00000401447 KRTAP4-8A0A0G2JLE6 195 aa5.74□□□□□ -1.49
RPA3-203ENST00000401447 CHURC1-FNTBB4DL54 471 aa5.74□□□□□ -1.49
RPA3-203ENST00000401447 PAX4O43316 350 aa5.74□□□□□ -1.49
RPA3-203ENST00000401447 DNAJA2O60884 412 aa5.74□□□□□ -1.49
RPA3-203ENST00000401447 ERCC5P28715 1186 aaPredicted RBP5.74□□□□□ -1.49
RPA3-203ENST00000401447 CLCQ05315 142 aa5.74□□□□□ -1.49
RPA3-203ENST00000401447 COL9A2Q14055 689 aaPredicted RBP5.74□□□□□ -1.49
RPA3-203ENST00000401447 AOC3Q16853 763 aa5.74□□□□□ -1.49
RPA3-203ENST00000401447 FBXW10Q5XX13 1052 aa5.74□□□□□ -1.49
RPA3-203ENST00000401447 TMEM40Q8WWA1 233 aa5.74□□□□□ -1.49
RPA3-203ENST00000401447 ASB11Q8WXH4 323 aa5.74□□□□□ -1.49
RPA3-203ENST00000401447 TNKS2Q9H2K2 1166 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms