RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 CIB2O75838 187 aa15.28■□□□□ 0.04
VAPA-202ENST00000400000 HELLSQ9NRZ9 838 aa15.28■□□□□ 0.04
VAPA-202ENST00000400000 LRWD1Q9UFC0 647 aa15.28■□□□□ 0.04
VAPA-202ENST00000400000 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.28■□□□□ 0.04
VAPA-202ENST00000400000 DNM2P50570 870 aa15.28■□□□□ 0.04
VAPA-202ENST00000400000 CABP7Q86V35 215 aa15.28■□□□□ 0.04
VAPA-202ENST00000400000 SPICE1Q8N0Z3 855 aa15.28■□□□□ 0.04
VAPA-202ENST00000400000 UHMK1Q8TAS1 419 aaKnown RBP15.28■□□□□ 0.04
VAPA-202ENST00000400000 FAM76AQ8TAV0 307 aa15.28■□□□□ 0.04
VAPA-202ENST00000400000 SPATA17Q96L03 361 aa15.28■□□□□ 0.04
VAPA-202ENST00000400000 ANKFY1Q9P2R3 1169 aa15.28■□□□□ 0.04
VAPA-202ENST00000400000 BRAPQ7Z569 592 aa15.28■□□□□ 0.04
VAPA-202ENST00000400000 TTC30AQ86WT1 665 aa15.28■□□□□ 0.04
VAPA-202ENST00000400000 DIS3L2Q8IYB7 885 aaKnown RBP15.28■□□□□ 0.04
VAPA-202ENST00000400000 YTHDC2Q9H6S0 1430 aaKnown RBP15.28■□□□□ 0.04
VAPA-202ENST00000400000 GOLGA6CA6NDK9 693 aa15.28■□□□□ 0.04
VAPA-202ENST00000400000 GOLGA6BA6NDN3 693 aa15.28■□□□□ 0.04
VAPA-202ENST00000400000 STK10O94804 968 aaKnown RBP15.28■□□□□ 0.04
VAPA-202ENST00000400000 GOLGA6DP0CG33 693 aa15.28■□□□□ 0.04
VAPA-202ENST00000400000 MYL5Q02045 173 aa15.28■□□□□ 0.04
VAPA-202ENST00000400000 ANKRD42Q8N9B4 389 aa15.28■□□□□ 0.04
VAPA-202ENST00000400000 GOLGA6AQ9NYA3 693 aa15.28■□□□□ 0.04
VAPA-202ENST00000400000 IL16Q14005 1332 aa15.27■□□□□ 0.04
VAPA-202ENST00000400000 EYA2O00167 538 aa15.27■□□□□ 0.04
VAPA-202ENST00000400000 IP6K1Q92551 441 aa15.27■□□□□ 0.04
VAPA-202ENST00000400000 PPP1R12CQ9BZL4 782 aa15.27■□□□□ 0.04
VAPA-202ENST00000400000 PLCD1P51178 756 aa15.27■□□□□ 0.04
VAPA-202ENST00000400000 PAK1Q13153 545 aa15.27■□□□□ 0.04
VAPA-202ENST00000400000 PRR16Q569H4 304 aa15.27■□□□□ 0.04
VAPA-202ENST00000400000 NXNQ6DKJ4 435 aa15.27■□□□□ 0.04
VAPA-202ENST00000400000 C8orf74Q6P047 294 aa15.27■□□□□ 0.04
VAPA-202ENST00000400000 PLBD2Q8NHP8 589 aa15.27■□□□□ 0.04
VAPA-202ENST00000400000 MFSD14BQ5SR56 506 aa15.27■□□□□ 0.04
VAPA-202ENST00000400000 HAUS3Q68CZ6 603 aa15.27■□□□□ 0.04
VAPA-202ENST00000400000 GPR161Q8N6U8 529 aaKnown RBP15.27■□□□□ 0.04
VAPA-202ENST00000400000 NSMCE1Q8WV22 266 aa15.27■□□□□ 0.04
VAPA-202ENST00000400000 GPKOWQ92917 476 aaPredicted RBP eCLIP15.27■□□□□ 0.041e-7■■□□□ 14.2
VAPA-202ENST00000400000 ZNF653Q96CK0 615 aa15.27■□□□□ 0.04
VAPA-202ENST00000400000 FNDC3AQ9Y2H6 1198 aaKnown RBP15.27■□□□□ 0.04
VAPA-202ENST00000400000 GADD45BO75293 160 aaPredicted RBP15.27■□□□□ 0.03
VAPA-202ENST00000400000 METTL22Q9BUU2 404 aaPredicted RBP15.27■□□□□ 0.03
VAPA-202ENST00000400000 NSD2O96028 1365 aa15.27■□□□□ 0.03
VAPA-202ENST00000400000 DLATP10515 647 aaKnown RBP15.27■□□□□ 0.03
VAPA-202ENST00000400000 DPY19L2Q6NUT2 758 aa15.27■□□□□ 0.03
VAPA-202ENST00000400000 CCDC105Q8IYK2 499 aa15.27■□□□□ 0.03
VAPA-202ENST00000400000 CCDC89Q8N998 374 aa15.27■□□□□ 0.03
VAPA-202ENST00000400000 DCPSQ96C86 337 aaKnown RBP15.27■□□□□ 0.03
VAPA-202ENST00000400000 USP26Q9BXU7 913 aa15.27■□□□□ 0.03
VAPA-202ENST00000400000 VPS37BQ9H9H4 285 aa15.27■□□□□ 0.03
VAPA-202ENST00000400000 MTX1Q13505 466 aa15.26■□□□□ 0.03
VAPA-202ENST00000400000 C8orf34Q49A92 452 aa15.26■□□□□ 0.03
VAPA-202ENST00000400000 KRBA2Q6ZNG9 492 aa15.26■□□□□ 0.03
VAPA-202ENST00000400000 NBPF11Q86T75 865 aa15.26■□□□□ 0.03
VAPA-202ENST00000400000 CDAN1Q8IWY9 1227 aa15.26■□□□□ 0.03
VAPA-202ENST00000400000 SLF1Q9BQI6 1058 aa15.26■□□□□ 0.03
VAPA-202ENST00000400000 ASXL1Q8IXJ9 1541 aa15.26■□□□□ 0.03
VAPA-202ENST00000400000 KCNA4P22459 653 aa15.26■□□□□ 0.03
VAPA-202ENST00000400000 ARID4AP29374 1257 aaPredicted RBP15.26■□□□□ 0.03
VAPA-202ENST00000400000 ALDH3A1P30838 453 aa15.26■□□□□ 0.03
VAPA-202ENST00000400000 PPP4R4Q6NUP7 873 aa15.26■□□□□ 0.03
VAPA-202ENST00000400000 CCDC125Q86Z20 511 aa15.26■□□□□ 0.03
VAPA-202ENST00000400000 SYCP2Q9BX26 1530 aa15.26■□□□□ 0.03
VAPA-202ENST00000400000 KIF22Q14807 665 aa15.26■□□□□ 0.03
VAPA-202ENST00000400000 PTPN21Q16825 1174 aa15.26■□□□□ 0.03
VAPA-202ENST00000400000 LSM14BQ9BX40 385 aaKnown RBP15.26■□□□□ 0.03
VAPA-202ENST00000400000 RTEL1Q9NZ71 1219 aa15.26■□□□□ 0.03
VAPA-202ENST00000400000 SNX14Q9Y5W7 946 aa15.26■□□□□ 0.03
VAPA-202ENST00000400000 PNMA6EA0A0J9YXQ4 647 aa15.26■□□□□ 0.03
VAPA-202ENST00000400000 ARPP19P56211 112 aa15.26■□□□□ 0.03
VAPA-202ENST00000400000 SOS1Q07889 1333 aaPredicted RBP15.26■□□□□ 0.03
VAPA-202ENST00000400000 CETN3O15182 167 aa15.26■□□□□ 0.03
VAPA-202ENST00000400000 KRT81Q14533 505 aa15.26■□□□□ 0.03
VAPA-202ENST00000400000 CDC37L1Q7L3B6 337 aa15.26■□□□□ 0.03
VAPA-202ENST00000400000 KIF9Q9HAQ2 790 aa15.26■□□□□ 0.03
VAPA-202ENST00000400000 EXOC7Q9UPT5 735 aa15.26■□□□□ 0.03
VAPA-202ENST00000400000 BUB1O43683 1085 aa15.26■□□□□ 0.03
VAPA-202ENST00000400000 OATP04181 439 aa15.26■□□□□ 0.03
VAPA-202ENST00000400000 GUCY2FP51841 1108 aa15.26■□□□□ 0.03
VAPA-202ENST00000400000 LLGL1Q15334 1064 aa15.26■□□□□ 0.03
VAPA-202ENST00000400000 PRIMPOLQ96LW4 560 aa15.26■□□□□ 0.03
VAPA-202ENST00000400000 URB2Q14146 1524 aaKnown RBP15.25■□□□□ 0.03
VAPA-202ENST00000400000 RRAGAQ7L523 313 aa15.25■□□□□ 0.03
VAPA-202ENST00000400000 PHLDB2Q86SQ0 1253 aa15.25■□□□□ 0.03
VAPA-202ENST00000400000 UBL4BQ8N7F7 174 aa15.25■□□□□ 0.03
VAPA-202ENST00000400000 CHMP6Q96FZ7 201 aa15.25■□□□□ 0.03
VAPA-202ENST00000400000 RILPQ96NA2 401 aa15.25■□□□□ 0.03
VAPA-202ENST00000400000 ADKP55263 362 aaKnown RBP15.25■□□□□ 0.03
VAPA-202ENST00000400000 CARD6Q9BX69 1037 aa15.25■□□□□ 0.03
VAPA-202ENST00000400000 EBAG9O00559 213 aa15.25■□□□□ 0.03
VAPA-202ENST00000400000 BCAMP50895 628 aa15.25■□□□□ 0.03
VAPA-202ENST00000400000 CTAGE3PQ8IX95 158 aa15.25■□□□□ 0.03
VAPA-202ENST00000400000 STIM2Q9P246 746 aa15.25■□□□□ 0.03
VAPA-202ENST00000400000 CAPN9O14815 690 aa15.25■□□□□ 0.03
VAPA-202ENST00000400000 BUB1BO60566 1050 aaPredicted RBP15.25■□□□□ 0.03
VAPA-202ENST00000400000 SH2D4BQ5SQS7 431 aa15.25■□□□□ 0.03
VAPA-202ENST00000400000 FAM193BQ96PV7 902 aaPredicted RBP15.25■□□□□ 0.03
VAPA-202ENST00000400000 SUDS3Q9H7L9 328 aaPredicted RBP15.25■□□□□ 0.03
VAPA-202ENST00000400000 MIER3Q7Z3K6 550 aa15.25■□□□□ 0.03
VAPA-202ENST00000400000 CNGA4Q8IV77 575 aa15.25■□□□□ 0.03
VAPA-202ENST00000400000 DEPTORQ8TB45 409 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms