RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 ME3Q16798 604 aa17.83■□□□□ 0.45
ITSN1-209ENST00000399352 ARHGAP44Q17R89 818 aa17.83■□□□□ 0.45
ITSN1-209ENST00000399352 TNNI3KQ59H18 835 aa17.83■□□□□ 0.45
ITSN1-209ENST00000399352 AFAP1L2Q8N4X5 818 aa17.83■□□□□ 0.45
ITSN1-209ENST00000399352 CCDC51Q96ER9 411 aa17.83■□□□□ 0.45
ITSN1-209ENST00000399352 FPGT-TNNI3KV9GXZ4 949 aa17.83■□□□□ 0.45
ITSN1-209ENST00000399352 PFKFB1P16118 471 aa17.83■□□□□ 0.45
ITSN1-209ENST00000399352 NCBP1Q09161 790 aaKnown RBP17.83■□□□□ 0.45
ITSN1-209ENST00000399352 CFAP61Q8NHU2 1237 aa17.83■□□□□ 0.45
ITSN1-209ENST00000399352 SETDB2Q96T68 719 aa17.83■□□□□ 0.45
ITSN1-209ENST00000399352 NFATC2IPQ8NCF5 419 aa17.83■□□□□ 0.44
ITSN1-209ENST00000399352 AMFRQ9UKV5 643 aa17.83■□□□□ 0.44
ITSN1-209ENST00000399352 GIPC1O14908 333 aa17.83■□□□□ 0.44
ITSN1-209ENST00000399352 VPS41P49754 854 aa17.83■□□□□ 0.44
ITSN1-209ENST00000399352 CCDC13Q8IYE1 715 aa17.83■□□□□ 0.44
ITSN1-209ENST00000399352 ABCB4P21439 1286 aa17.82■□□□□ 0.44
ITSN1-209ENST00000399352 ST5P78524 1137 aa17.82■□□□□ 0.44
ITSN1-209ENST00000399352 IFT88Q13099 833 aa17.82■□□□□ 0.44
ITSN1-209ENST00000399352 TRPC3Q13507 836 aa17.82■□□□□ 0.44
ITSN1-209ENST00000399352 HAUS3Q68CZ6 603 aa17.82■□□□□ 0.44
ITSN1-209ENST00000399352 CAPN12Q6ZSI9 719 aa17.82■□□□□ 0.44
ITSN1-209ENST00000399352 NAP1L4Q99733 375 aaKnown RBP17.82■□□□□ 0.44
ITSN1-209ENST00000399352 VEZTQ9HBM0 779 aa17.82■□□□□ 0.44
ITSN1-209ENST00000399352 GPAA1O43292 621 aa17.82■□□□□ 0.44
ITSN1-209ENST00000399352 ZNF827Q17R98 1081 aa17.82■□□□□ 0.44
ITSN1-209ENST00000399352 U2AF1L4Q8WU68 220 aaKnown RBP17.82■□□□□ 0.44
ITSN1-209ENST00000399352 PARP2Q9UGN5 583 aa17.82■□□□□ 0.44
ITSN1-209ENST00000399352 DAPK3O43293 454 aa17.82■□□□□ 0.44
ITSN1-209ENST00000399352 NCAPH2Q6IBW4 605 aa17.82■□□□□ 0.44
ITSN1-209ENST00000399352 FAF1Q9UNN5 650 aaPredicted RBP17.82■□□□□ 0.44
ITSN1-209ENST00000399352 LRRD1A4D1F6 860 aa17.82■□□□□ 0.44
ITSN1-209ENST00000399352 SMIM24O75264 130 aa17.82■□□□□ 0.44
ITSN1-209ENST00000399352 EIF6P56537 245 aaKnown RBP17.82■□□□□ 0.44
ITSN1-209ENST00000399352 ADAT2Q7Z6V5 191 aaKnown RBP17.82■□□□□ 0.44
ITSN1-209ENST00000399352 WHAMMQ8TF30 809 aa17.82■□□□□ 0.44
ITSN1-209ENST00000399352 VCX3AQ9NNX9 186 aa17.82■□□□□ 0.44
ITSN1-209ENST00000399352 NRBP1Q9UHY1 535 aa17.82■□□□□ 0.44
ITSN1-209ENST00000399352 LDHBP07195 334 aaKnown RBP17.81■□□□□ 0.44
ITSN1-209ENST00000399352 KCNJ18B7U540 433 aa17.81■□□□□ 0.44
ITSN1-209ENST00000399352 KCNJ12Q14500 433 aa17.81■□□□□ 0.44
ITSN1-209ENST00000399352 LRRC59Q96AG4 307 aaKnown RBP17.81■□□□□ 0.44
ITSN1-209ENST00000399352 SPATS2LQ9NUQ6 558 aaKnown RBP17.81■□□□□ 0.44
ITSN1-209ENST00000399352 AFG3L2Q9Y4W6 797 aa17.81■□□□□ 0.44
ITSN1-209ENST00000399352 NBPF14Q5TI25 921 aa17.81■□□□□ 0.44
ITSN1-209ENST00000399352 ZCRB1Q8TBF4 217 aaKnown RBP17.81■□□□□ 0.44
ITSN1-209ENST00000399352 TRIM6Q9C030 488 aaPredicted RBP17.81■□□□□ 0.44
ITSN1-209ENST00000399352 EXOC3O60645 756 aa17.81■□□□□ 0.44
ITSN1-209ENST00000399352 PFDN1O60925 122 aa17.81■□□□□ 0.44
ITSN1-209ENST00000399352 IFNB1P01574 187 aa17.81■□□□□ 0.44
ITSN1-209ENST00000399352 SMTNP53814 917 aa17.81■□□□□ 0.44
ITSN1-209ENST00000399352 ADALQ6DHV7 355 aa17.81■□□□□ 0.44
ITSN1-209ENST00000399352 MAGI1Q96QZ7 1491 aaPredicted RBP17.81■□□□□ 0.44
ITSN1-209ENST00000399352 PLCG2P16885 1265 aa17.81■□□□□ 0.44
ITSN1-209ENST00000399352 BSPRYQ5W0U4 402 aa17.81■□□□□ 0.44
ITSN1-209ENST00000399352 AEBP2Q6ZN18 517 aaPredicted RBP17.81■□□□□ 0.44
ITSN1-209ENST00000399352 MIER3Q7Z3K6 550 aa17.81■□□□□ 0.44
ITSN1-209ENST00000399352 CCDC89Q8N998 374 aa17.81■□□□□ 0.44
ITSN1-209ENST00000399352 RNF34Q969K3 372 aa17.81■□□□□ 0.44
ITSN1-209ENST00000399352 LSM14BQ9BX40 385 aaKnown RBP17.81■□□□□ 0.44
ITSN1-209ENST00000399352 MYSM1Q5VVJ2 828 aa17.8■□□□□ 0.44
ITSN1-209ENST00000399352 FANCLQ9NW38 375 aa17.8■□□□□ 0.44
ITSN1-209ENST00000399352 PNMA6EA0A0J9YXQ4 647 aa17.8■□□□□ 0.44
ITSN1-209ENST00000399352 CTDSPL2Q05D32 466 aa17.8■□□□□ 0.44
ITSN1-209ENST00000399352 CABP7Q86V35 215 aa17.8■□□□□ 0.44
ITSN1-209ENST00000399352 MRFAP1L1Q96HT8 127 aa17.8■□□□□ 0.44
ITSN1-209ENST00000399352 USP28Q96RU2 1077 aa17.8■□□□□ 0.44
ITSN1-209ENST00000399352 SBNO1A3KN83 1393 aa17.8■□□□□ 0.44
ITSN1-209ENST00000399352 STK10O94804 968 aaKnown RBP17.8■□□□□ 0.44
ITSN1-209ENST00000399352 PRR16Q569H4 304 aa17.8■□□□□ 0.44
ITSN1-209ENST00000399352 DZIP3Q86Y13 1208 aaKnown RBP17.8■□□□□ 0.44
ITSN1-209ENST00000399352 E2F4Q16254 413 aa17.8■□□□□ 0.44
ITSN1-209ENST00000399352 MORC4Q8TE76 937 aa17.8■□□□□ 0.44
ITSN1-209ENST00000399352 APPBP2Q92624 585 aa17.8■□□□□ 0.44
ITSN1-209ENST00000399352 NSFL1CQ9UNZ2 370 aaKnown RBP17.8■□□□□ 0.44
ITSN1-209ENST00000399352 LUC7L3O95232 432 aaKnown RBP17.79■□□□□ 0.44
ITSN1-209ENST00000399352 IFNAR2P48551 515 aa17.79■□□□□ 0.44
ITSN1-209ENST00000399352 EFCC1Q9HA90 598 aa17.79■□□□□ 0.44
ITSN1-209ENST00000399352 ARHGEF35A5YM69 484 aa17.79■□□□□ 0.44
ITSN1-209ENST00000399352 SPECC1L-ADORA2AF8WAN1 911 aa17.79■□□□□ 0.44
ITSN1-209ENST00000399352 HMGB2P26583 209 aaKnown RBP17.79■□□□□ 0.44
ITSN1-209ENST00000399352 VPS54Q9P1Q0 977 aa17.79■□□□□ 0.44
ITSN1-209ENST00000399352 GCNT3O95395 438 aa17.79■□□□□ 0.44
ITSN1-209ENST00000399352 MAP3K21Q5TCX8 1036 aa17.79■□□□□ 0.44
ITSN1-209ENST00000399352 P3H4Q92791 437 aa17.79■□□□□ 0.44
ITSN1-209ENST00000399352 BCAP29Q9UHQ4 241 aa17.79■□□□□ 0.44
ITSN1-209ENST00000399352 FAN1Q9Y2M0 1017 aa17.79■□□□□ 0.44
ITSN1-209ENST00000399352 GUCY2DQ02846 1103 aa17.79■□□□□ 0.44
ITSN1-209ENST00000399352 NONOQ15233 471 aaKnown RBP eCLIP17.79■□□□□ 0.44
ITSN1-209ENST00000399352 RBBP5Q15291 538 aaKnown RBP17.79■□□□□ 0.44
ITSN1-209ENST00000399352 TCP11Q8WWU5 503 aa17.79■□□□□ 0.44
ITSN1-209ENST00000399352 ACSBG1Q96GR2 724 aa17.79■□□□□ 0.44
ITSN1-209ENST00000399352 PPP1R13BQ96KQ4 1090 aa17.79■□□□□ 0.44
ITSN1-209ENST00000399352 BCRP11274 1271 aa17.78■□□□□ 0.44
ITSN1-209ENST00000399352 PALM2Q8IXS6 379 aa17.78■□□□□ 0.44
ITSN1-209ENST00000399352 IRX4P78413 519 aa17.78■□□□□ 0.44
ITSN1-209ENST00000399352 MORC3Q14149 939 aa17.78■□□□□ 0.44
ITSN1-209ENST00000399352 MYCT1Q8N699 235 aa17.78■□□□□ 0.44
ITSN1-209ENST00000399352 RABGGTAQ92696 567 aa17.78■□□□□ 0.44
ITSN1-209ENST00000399352 NUCKS1Q9H1E3 243 aaKnown RBP17.78■□□□□ 0.44
ITSN1-209ENST00000399352 AOX1Q06278 1338 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms