RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 N4BP3O15049 544 aa11.88□□□□□ -0.51
CPSF1P1-201ENST00000397477 BAG3O95817 575 aa11.88□□□□□ -0.51
CPSF1P1-201ENST00000397477 NFIXQ14938 502 aa11.88□□□□□ -0.51
CPSF1P1-201ENST00000397477 TNS2Q63HR2 1409 aa11.88□□□□□ -0.51
CPSF1P1-201ENST00000397477 UBA7P41226 1012 aa11.87□□□□□ -0.51
CPSF1P1-201ENST00000397477 RBM5P52756 815 aaKnown RBP eCLIP11.87□□□□□ -0.51
CPSF1P1-201ENST00000397477 CCZ1BP86790 482 aa11.87□□□□□ -0.51
CPSF1P1-201ENST00000397477 CCZ1P86791 482 aaPredicted RBP11.87□□□□□ -0.51
CPSF1P1-201ENST00000397477 FMR1Q06787 632 aaKnown RBP eCLIP11.87□□□□□ -0.51
CPSF1P1-201ENST00000397477 PNMA1Q8ND90 353 aa11.87□□□□□ -0.51
CPSF1P1-201ENST00000397477 MAP3K14Q99558 947 aa11.87□□□□□ -0.51
CPSF1P1-201ENST00000397477 ANKRD2Q9GZV1 360 aa11.87□□□□□ -0.51
CPSF1P1-201ENST00000397477 FOXP1Q9H334 677 aaPredicted RBP11.87□□□□□ -0.51
CPSF1P1-201ENST00000397477 ZHX1Q9UKY1 873 aaPredicted RBP11.87□□□□□ -0.51
CPSF1P1-201ENST00000397477 LETM2Q2VYF4 491 aa11.87□□□□□ -0.51
CPSF1P1-201ENST00000397477 TEX35Q5T0J7 233 aa11.87□□□□□ -0.51
CPSF1P1-201ENST00000397477 SOGA3Q5TF21 947 aa11.87□□□□□ -0.51
CPSF1P1-201ENST00000397477 ANKRD20A12PQ8NF67 263 aa11.87□□□□□ -0.51
CPSF1P1-201ENST00000397477 SH3RF3Q8TEJ3 882 aaPredicted RBP11.87□□□□□ -0.51
CPSF1P1-201ENST00000397477 NSUN4Q96CB9 384 aaKnown RBP11.87□□□□□ -0.51
CPSF1P1-201ENST00000397477 PTPREP23469 700 aa11.87□□□□□ -0.51
CPSF1P1-201ENST00000397477 STAT6P42226 847 aa11.87□□□□□ -0.51
CPSF1P1-201ENST00000397477 INF2Q27J81 1249 aa11.87□□□□□ -0.51
CPSF1P1-201ENST00000397477 RASGRP2Q7LDG7 609 aa11.87□□□□□ -0.51
CPSF1P1-201ENST00000397477 NBPF11Q86T75 865 aa11.87□□□□□ -0.51
CPSF1P1-201ENST00000397477 TEX11Q8IYF3 940 aa11.87□□□□□ -0.51
CPSF1P1-201ENST00000397477 STAG2Q8N3U4 1231 aa11.87□□□□□ -0.51
CPSF1P1-201ENST00000397477 SRBD1Q8N5C6 995 aaKnown RBP11.87□□□□□ -0.51
CPSF1P1-201ENST00000397477 PPP1R13BQ96KQ4 1090 aa11.87□□□□□ -0.51
CPSF1P1-201ENST00000397477 UBA5Q9GZZ9 404 aa11.87□□□□□ -0.51
CPSF1P1-201ENST00000397477 WDR19Q8NEZ3 1342 aa11.86□□□□□ -0.51
CPSF1P1-201ENST00000397477 CDC25BP30305 580 aa11.86□□□□□ -0.51
CPSF1P1-201ENST00000397477 NAPAP54920 295 aa11.86□□□□□ -0.51
CPSF1P1-201ENST00000397477 ERCC6LQ2NKX8 1250 aa11.86□□□□□ -0.51
CPSF1P1-201ENST00000397477 UBXN4Q92575 508 aa11.86□□□□□ -0.51
CPSF1P1-201ENST00000397477 NUP88Q99567 741 aaPredicted RBP11.86□□□□□ -0.51
CPSF1P1-201ENST00000397477 BAG1Q99933 345 aaPredicted RBP11.86□□□□□ -0.51
CPSF1P1-201ENST00000397477 RNF26Q9BY78 433 aaPredicted RBP11.86□□□□□ -0.51
CPSF1P1-201ENST00000397477 FBXO2Q9UK22 296 aaPredicted RBP11.86□□□□□ -0.51
CPSF1P1-201ENST00000397477 IKQ13123 557 aaPredicted RBP11.86□□□□□ -0.51
CPSF1P1-201ENST00000397477 SPTY2D1Q68D10 685 aaPredicted RBP11.86□□□□□ -0.51
CPSF1P1-201ENST00000397477 ZNF771Q7L3S4 317 aaPredicted RBP11.86□□□□□ -0.51
CPSF1P1-201ENST00000397477 ZSCAN29Q8IWY8 852 aaPredicted RBP11.86□□□□□ -0.51
CPSF1P1-201ENST00000397477 RIOK1Q9BRS2 568 aaKnown RBP11.86□□□□□ -0.51
CPSF1P1-201ENST00000397477 CCDC94Q9BW85 323 aaPredicted RBP11.86□□□□□ -0.51
CPSF1P1-201ENST00000397477 PNPLA7Q6ZV29 1317 aa11.86□□□□□ -0.51
CPSF1P1-201ENST00000397477 PHRF1Q9P1Y6 1649 aaKnown RBP11.86□□□□□ -0.51
CPSF1P1-201ENST00000397477 SCG2P13521 617 aa11.86□□□□□ -0.51
CPSF1P1-201ENST00000397477 JAKMIP3Q5VZ66 844 aa11.86□□□□□ -0.51
CPSF1P1-201ENST00000397477 TICAM2Q86XR7 235 aa11.86□□□□□ -0.51
CPSF1P1-201ENST00000397477 TMX4Q9H1E5 349 aaPredicted RBP11.86□□□□□ -0.51
CPSF1P1-201ENST00000397477 RBM28Q9NW13 759 aaKnown RBP11.86□□□□□ -0.51
CPSF1P1-201ENST00000397477 PP2D1A8MPX8 630 aa11.85□□□□□ -0.51
CPSF1P1-201ENST00000397477 WNT7AO00755 349 aa11.85□□□□□ -0.51
CPSF1P1-201ENST00000397477 SLU7O95391 586 aaKnown RBP11.85□□□□□ -0.51
CPSF1P1-201ENST00000397477 CALM1P0DP23 149 aa11.85□□□□□ -0.51
CPSF1P1-201ENST00000397477 CALM2P0DP24 149 aa11.85□□□□□ -0.51
CPSF1P1-201ENST00000397477 CALM3P0DP25 149 aa11.85□□□□□ -0.51
CPSF1P1-201ENST00000397477 ZHX3Q9H4I2 956 aa11.85□□□□□ -0.51
CPSF1P1-201ENST00000397477 TAB2Q9NYJ8 693 aa11.85□□□□□ -0.51
CPSF1P1-201ENST00000397477 NCAPHQ15003 741 aa11.85□□□□□ -0.51
CPSF1P1-201ENST00000397477 KANK3Q6NY19 840 aa11.85□□□□□ -0.51
CPSF1P1-201ENST00000397477 CLEC4GQ6UXB4 293 aa11.85□□□□□ -0.51
CPSF1P1-201ENST00000397477 FRMPD2Q68DX3 1309 aaPredicted RBP11.85□□□□□ -0.51
CPSF1P1-201ENST00000397477 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.85□□□□□ -0.51
CPSF1P1-201ENST00000397477 NCBP1Q09161 790 aaKnown RBP11.85□□□□□ -0.51
CPSF1P1-201ENST00000397477 TSR1Q2NL82 804 aaKnown RBP11.85□□□□□ -0.51
CPSF1P1-201ENST00000397477 CCDC178Q5BJE1 867 aa11.85□□□□□ -0.51
CPSF1P1-201ENST00000397477 E4F1Q66K89 784 aaPredicted RBP11.85□□□□□ -0.51
CPSF1P1-201ENST00000397477 IGSF22Q8N9C0 903 aa11.85□□□□□ -0.51
CPSF1P1-201ENST00000397477 GPCPD1Q9NPB8 672 aa11.85□□□□□ -0.51
CPSF1P1-201ENST00000397477 RNF216Q9NWF9 866 aaPredicted RBP11.85□□□□□ -0.51
CPSF1P1-201ENST00000397477 SRPRBQ9Y5M8 271 aaKnown RBP11.85□□□□□ -0.51
CPSF1P1-201ENST00000397477 SPATA31A5Q5VU36 1347 aa11.84□□□□□ -0.51
CPSF1P1-201ENST00000397477 SPATA31A7Q8IWB4 1347 aa11.84□□□□□ -0.51
CPSF1P1-201ENST00000397477 MFSD14BQ5SR56 506 aa11.84□□□□□ -0.51
CPSF1P1-201ENST00000397477 ZNF804AQ7Z570 1209 aa11.84□□□□□ -0.51
CPSF1P1-201ENST00000397477 IQUBQ8NA54 791 aa11.84□□□□□ -0.51
CPSF1P1-201ENST00000397477 MLKLQ8NB16 471 aa11.84□□□□□ -0.51
CPSF1P1-201ENST00000397477 CCDC12Q8WUD4 166 aaPredicted RBP11.84□□□□□ -0.51
CPSF1P1-201ENST00000397477 TIGD1Q96MW7 591 aa11.84□□□□□ -0.51
CPSF1P1-201ENST00000397477 IMPACTQ9P2X3 320 aa11.84□□□□□ -0.51
CPSF1P1-201ENST00000397477 SEC63Q9UGP8 760 aaKnown RBP11.84□□□□□ -0.51
CPSF1P1-201ENST00000397477 SYNRGQ9UMZ2 1314 aa11.84□□□□□ -0.51
CPSF1P1-201ENST00000397477 TEX33O43247 280 aa11.84□□□□□ -0.51
CPSF1P1-201ENST00000397477 IDEP14735 1019 aa11.84□□□□□ -0.51
CPSF1P1-201ENST00000397477 CASQ1P31415 396 aa11.84□□□□□ -0.51
CPSF1P1-201ENST00000397477 GTF2IP78347 998 aa11.84□□□□□ -0.51
CPSF1P1-201ENST00000397477 USP17L2Q6R6M4 530 aa11.84□□□□□ -0.51
CPSF1P1-201ENST00000397477 TMTC3Q6ZXV5 915 aa11.84□□□□□ -0.51
CPSF1P1-201ENST00000397477 FBXL16Q8N461 479 aa11.84□□□□□ -0.51
CPSF1P1-201ENST00000397477 CARD6Q9BX69 1037 aa11.84□□□□□ -0.51
CPSF1P1-201ENST00000397477 NARFQ9UHQ1 456 aa11.84□□□□□ -0.51
CPSF1P1-201ENST00000397477 TUBGCP6Q96RT7 1819 aa11.84□□□□□ -0.51
CPSF1P1-201ENST00000397477 USP54Q70EL1 1684 aa11.84□□□□□ -0.51
CPSF1P1-201ENST00000397477 ZSCAN12O43309 604 aa11.84□□□□□ -0.51
CPSF1P1-201ENST00000397477 BTDP43251 543 aa11.84□□□□□ -0.51
CPSF1P1-201ENST00000397477 SCNN1DP51172 638 aa11.84□□□□□ -0.51
CPSF1P1-201ENST00000397477 GRIK5Q16478 980 aa11.84□□□□□ -0.51
CPSF1P1-201ENST00000397477 CCDC96Q2M329 555 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms