RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 WNT7AO00755 349 aa27.2■■□□□ 1.94
PABPN1-202ENST00000397276 PRPF3O43395 683 aaKnown RBP27.2■■□□□ 1.94
PABPN1-202ENST00000397276 KRT2P35908 639 aa27.2■■□□□ 1.94
PABPN1-202ENST00000397276 PDE4BQ07343 736 aa27.2■■□□□ 1.94
PABPN1-202ENST00000397276 ZNF827Q17R98 1081 aa27.2■■□□□ 1.94
PABPN1-202ENST00000397276 ZNF771Q7L3S4 317 aaPredicted RBP27.2■■□□□ 1.94
PABPN1-202ENST00000397276 DUOX1Q9NRD9 1551 aa27.2■■□□□ 1.94
PABPN1-202ENST00000397276 FGRP09769 529 aa27.2■■□□□ 1.94
PABPN1-202ENST00000397276 PPP2R5BQ15173 497 aa27.2■■□□□ 1.94
PABPN1-202ENST00000397276 SRBD1Q8N5C6 995 aaKnown RBP27.2■■□□□ 1.94
PABPN1-202ENST00000397276 PHF20Q9BVI0 1012 aa27.2■■□□□ 1.94
PABPN1-202ENST00000397276 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.2■■□□□ 1.94
PABPN1-202ENST00000397276 NEMFO60524 1076 aa27.19■■□□□ 1.94
PABPN1-202ENST00000397276 SERPINC1P01008 464 aa27.19■■□□□ 1.94
PABPN1-202ENST00000397276 VEGFAP15692 232 aaPredicted RBP27.19■■□□□ 1.94
PABPN1-202ENST00000397276 MDM2Q00987 491 aaPredicted RBP27.19■■□□□ 1.94
PABPN1-202ENST00000397276 TRAPPC3LQ5T215 181 aa27.19■■□□□ 1.94
PABPN1-202ENST00000397276 FAM196AQ6ZSG2 479 aa27.19■■□□□ 1.94
PABPN1-202ENST00000397276 DPF2Q92785 391 aa27.19■■□□□ 1.94
PABPN1-202ENST00000397276 SRPRBQ9Y5M8 271 aaKnown RBP27.19■■□□□ 1.94
PABPN1-202ENST00000397276 EP400Q96L91 3159 aa27.19■■□□□ 1.94
PABPN1-202ENST00000397276 MYL5Q02045 173 aa27.19■■□□□ 1.94
PABPN1-202ENST00000397276 POSTNQ15063 836 aa27.19■■□□□ 1.94
PABPN1-202ENST00000397276 IKBKBO14920 756 aa27.18■■□□□ 1.94
PABPN1-202ENST00000397276 DIXDC1Q155Q3 683 aa27.18■■□□□ 1.94
PABPN1-202ENST00000397276 CTCFLQ8NI51 663 aaPredicted RBP27.18■■□□□ 1.94
PABPN1-202ENST00000397276 ATP8A2Q9NTI2 1148 aa27.18■■□□□ 1.94
PABPN1-202ENST00000397276 RBM28Q9NW13 759 aaKnown RBP27.18■■□□□ 1.94
PABPN1-202ENST00000397276 FANCLQ9NW38 375 aa27.18■■□□□ 1.94
PABPN1-202ENST00000397276 DDX41Q9UJV9 622 aaKnown RBP27.18■■□□□ 1.94
PABPN1-202ENST00000397276 MTMR7Q9Y216 660 aa27.18■■□□□ 1.94
PABPN1-202ENST00000397276 BAZ2BQ9UIF8 2168 aaKnown RBP27.18■■□□□ 1.94
PABPN1-202ENST00000397276 A0A1B0GUL6 1792 aa27.18■■□□□ 1.94
PABPN1-202ENST00000397276 TRIM75PA6NK02 468 aa27.18■■□□□ 1.94
PABPN1-202ENST00000397276 ZNF174Q15697 407 aa27.18■■□□□ 1.94
PABPN1-202ENST00000397276 GRIK5Q16478 980 aa27.18■■□□□ 1.94
PABPN1-202ENST00000397276 TMTC3Q6ZXV5 915 aa27.18■■□□□ 1.94
PABPN1-202ENST00000397276 FNBP4Q8N3X1 1017 aaPredicted RBP27.18■■□□□ 1.94
PABPN1-202ENST00000397276 ZNF215Q9UL58 517 aaPredicted RBP27.18■■□□□ 1.94
PABPN1-202ENST00000397276 CEP131Q9UPN4 1083 aa27.18■■□□□ 1.94
PABPN1-202ENST00000397276 PAXBP1Q9Y5B6 917 aa27.18■■□□□ 1.94
PABPN1-202ENST00000397276 DYNLL2Q96FJ2 89 aa27.17■■□□□ 1.94
PABPN1-202ENST00000397276 EPSTI1Q96J88 318 aa27.17■■□□□ 1.94
PABPN1-202ENST00000397276 UBASH3AP57075 661 aa27.17■■□□□ 1.94
PABPN1-202ENST00000397276 ARMCX5Q6P1M9 558 aa27.17■■□□□ 1.94
PABPN1-202ENST00000397276 CASZ1Q86V15 1759 aa27.17■■□□□ 1.94
PABPN1-202ENST00000397276 SCN7AQ01118 1682 aa27.16■■□□□ 1.94
PABPN1-202ENST00000397276 USP5P45974 858 aa27.16■■□□□ 1.94
PABPN1-202ENST00000397276 MAN1B1Q9UKM7 699 aa27.16■■□□□ 1.94
PABPN1-202ENST00000397276 CALM1P0DP23 149 aa27.16■■□□□ 1.94
PABPN1-202ENST00000397276 CALM2P0DP24 149 aa27.16■■□□□ 1.94
PABPN1-202ENST00000397276 CALM3P0DP25 149 aa27.16■■□□□ 1.94
PABPN1-202ENST00000397276 GSDMDP57764 484 aa27.16■■□□□ 1.94
PABPN1-202ENST00000397276 CFAP100Q494V2 611 aa27.16■■□□□ 1.94
PABPN1-202ENST00000397276 OSBPL5Q9H0X9 879 aaPredicted RBP27.16■■□□□ 1.94
PABPN1-202ENST00000397276 MYH13Q9UKX3 1938 aa27.15■■□□□ 1.94
PABPN1-202ENST00000397276 DHX58Q96C10 678 aa27.15■■□□□ 1.94
PABPN1-202ENST00000397276 ARPP21Q9UBL0 812 aaPredicted RBP27.15■■□□□ 1.94
PABPN1-202ENST00000397276 HOOK1Q9UJC3 728 aaKnown RBP27.15■■□□□ 1.94
PABPN1-202ENST00000397276 LDHBP07195 334 aaKnown RBP27.15■■□□□ 1.94
PABPN1-202ENST00000397276 PCP11498 1178 aaKnown RBP27.15■■□□□ 1.94
PABPN1-202ENST00000397276 SYCP1Q15431 976 aa27.15■■□□□ 1.94
PABPN1-202ENST00000397276 KIF18AQ8NI77 898 aa27.15■■□□□ 1.94
PABPN1-202ENST00000397276 CGNQ9P2M7 1197 aaKnown RBP27.15■■□□□ 1.94
PABPN1-202ENST00000397276 IMPACTQ9P2X3 320 aa27.15■■□□□ 1.94
PABPN1-202ENST00000397276 ORC4O43929 436 aa27.14■■□□□ 1.94
PABPN1-202ENST00000397276 DDAH1O94760 285 aa27.14■■□□□ 1.94
PABPN1-202ENST00000397276 KMT5BQ4FZB7 885 aa27.14■■□□□ 1.94
PABPN1-202ENST00000397276 CNBD1Q8NA66 436 aa27.14■■□□□ 1.94
PABPN1-202ENST00000397276 SH3RF3Q8TEJ3 882 aaPredicted RBP27.14■■□□□ 1.94
PABPN1-202ENST00000397276 RGL2O15211 777 aa27.14■■□□□ 1.94
PABPN1-202ENST00000397276 TFAP4Q01664 338 aa27.14■■□□□ 1.94
PABPN1-202ENST00000397276 CNTNAP5Q8WYK1 1306 aa27.14■■□□□ 1.93
PABPN1-202ENST00000397276 ADAMTS3O15072 1205 aa27.14■■□□□ 1.93
PABPN1-202ENST00000397276 CASP1P29466 404 aa27.14■■□□□ 1.93
PABPN1-202ENST00000397276 AFMP43652 599 aa27.14■■□□□ 1.93
PABPN1-202ENST00000397276 TRMT44Q8IYL2 757 aaKnown RBP27.14■■□□□ 1.93
PABPN1-202ENST00000397276 SMARCE1Q969G3 411 aa27.14■■□□□ 1.93
PABPN1-202ENST00000397276 SFPQP23246 707 aaKnown RBP eCLIP27.13■■□□□ 1.93
PABPN1-202ENST00000397276 BRMS1Q9HCU9 246 aa27.13■■□□□ 1.93
PABPN1-202ENST00000397276 A0A087X0B3 334 aa27.13■■□□□ 1.93
PABPN1-202ENST00000397276 GRAPQ13588 217 aa27.13■■□□□ 1.93
PABPN1-202ENST00000397276 GRAPLQ8TC17 118 aaPredicted RBP27.13■■□□□ 1.93
PABPN1-202ENST00000397276 NLRP5P59047 1200 aa27.12■■□□□ 1.93
PABPN1-202ENST00000397276 GOLGA8FQ08AF8 430 aa27.12■■□□□ 1.93
PABPN1-202ENST00000397276 GOLGA8DPQ0D2H9 430 aa27.12■■□□□ 1.93
PABPN1-202ENST00000397276 PTPN14Q15678 1187 aa27.12■■□□□ 1.93
PABPN1-202ENST00000397276 NPY5RQ15761 445 aa27.12■■□□□ 1.93
PABPN1-202ENST00000397276 SPTY2D1Q68D10 685 aaPredicted RBP27.12■■□□□ 1.93
PABPN1-202ENST00000397276 ZNF579Q8NAF0 562 aaKnown RBP27.12■■□□□ 1.93
PABPN1-202ENST00000397276 BTAF1O14981 1849 aa27.12■■□□□ 1.93
PABPN1-202ENST00000397276 PDS5AQ29RF7 1337 aaKnown RBP27.12■■□□□ 1.93
PABPN1-202ENST00000397276 TMEM232C9JQI7 657 aa27.12■■□□□ 1.93
PABPN1-202ENST00000397276 ACTN4O43707 911 aaKnown RBP27.12■■□□□ 1.93
PABPN1-202ENST00000397276 SLFN14P0C7P3 912 aa27.12■■□□□ 1.93
PABPN1-202ENST00000397276 RCSD1Q6JBY9 416 aa27.12■■□□□ 1.93
PABPN1-202ENST00000397276 PIK3AP1Q6ZUJ8 805 aa27.12■■□□□ 1.93
PABPN1-202ENST00000397276 LRRC4BQ9NT99 713 aa27.12■■□□□ 1.93
PABPN1-202ENST00000397276 FMR1Q06787 632 aaKnown RBP eCLIP27.11■■□□□ 1.93
PABPN1-202ENST00000397276 TGFBRAP1Q8WUH2 860 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms