RNA–Protein interactions for RNA: ENST00000395573.8

CNIH1-202, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 1 (best) BASIC

Gene CNIH1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-202ENST00000395573 USP17L10C9JJH3 530 aa13.43□□□□□ -0.26
CNIH1-202ENST00000395573 H0YGN5 161 aa13.43□□□□□ -0.26
CNIH1-202ENST00000395573 MAP3K12Q12852 859 aa13.43□□□□□ -0.26
CNIH1-202ENST00000395573 HSP90AB4PQ58FF6 505 aa13.43□□□□□ -0.26
CNIH1-202ENST00000395573 U2AF1L4Q8WU68 220 aaKnown RBP13.43□□□□□ -0.26
CNIH1-202ENST00000395573 DPF3Q92784 378 aa13.43□□□□□ -0.26
CNIH1-202ENST00000395573 ANTXR1Q9H6X2 564 aa13.43□□□□□ -0.26
CNIH1-202ENST00000395573 IL1RAPL2Q9NP60 686 aa13.43□□□□□ -0.26
CNIH1-202ENST00000395573 C19orf81C9J6K1 198 aa13.42□□□□□ -0.26
CNIH1-202ENST00000395573 APBB1O00213 710 aa13.42□□□□□ -0.26
CNIH1-202ENST00000395573 FARP2O94887 1054 aaPredicted RBP13.42□□□□□ -0.26
CNIH1-202ENST00000395573 SGPL1O95470 568 aa13.42□□□□□ -0.26
CNIH1-202ENST00000395573 ZNF467Q7Z7K2 595 aaPredicted RBP13.42□□□□□ -0.26
CNIH1-202ENST00000395573 RHPN1Q8TCX5 695 aa13.42□□□□□ -0.26
CNIH1-202ENST00000395573 HTATIP2Q9BUP3 242 aa13.42□□□□□ -0.26
CNIH1-202ENST00000395573 A0A0G2JMZ2 1700 aa13.42□□□□□ -0.26
CNIH1-202ENST00000395573 GH2P01242 217 aa13.41□□□□□ -0.26
CNIH1-202ENST00000395573 TFRCP02786 760 aaKnown RBP13.41□□□□□ -0.26
CNIH1-202ENST00000395573 HOXA7P31268 230 aaPredicted RBP13.41□□□□□ -0.26
CNIH1-202ENST00000395573 HERVK_113P62684 666 aa13.41□□□□□ -0.26
CNIH1-202ENST00000395573 TMED8Q6PL24 325 aaPredicted RBP13.41□□□□□ -0.26
CNIH1-202ENST00000395573 UBE2Q1Q7Z7E8 422 aa13.41□□□□□ -0.26
CNIH1-202ENST00000395573 DEFB118Q96PH6 123 aa13.41□□□□□ -0.26
CNIH1-202ENST00000395573 BCL11AQ9H165 835 aa13.41□□□□□ -0.26
CNIH1-202ENST00000395573 MORF4L1Q9UBU8 362 aa13.41□□□□□ -0.26
CNIH1-202ENST00000395573 SERPINB13Q9UIV8 391 aa13.41□□□□□ -0.26
CNIH1-202ENST00000395573 COLQQ9Y215 455 aaPredicted RBP13.41□□□□□ -0.26
CNIH1-202ENST00000395573 MAGEB6P1A0A0J9YX57 407 aa13.4□□□□□ -0.26
CNIH1-202ENST00000395573 HMMRO75330 724 aa13.4□□□□□ -0.26
CNIH1-202ENST00000395573 HMGCRP04035 888 aa13.4□□□□□ -0.26
CNIH1-202ENST00000395573 TTF1Q15361 905 aaPredicted RBP13.4□□□□□ -0.26
CNIH1-202ENST00000395573 USP17L2Q6R6M4 530 aa13.4□□□□□ -0.26
CNIH1-202ENST00000395573 CLASRPQ8N2M8 674 aaKnown RBP13.4□□□□□ -0.26
CNIH1-202ENST00000395573 P2RX7Q99572 595 aaKnown RBP13.4□□□□□ -0.26
CNIH1-202ENST00000395573 FEZ1Q99689 392 aa13.4□□□□□ -0.26
CNIH1-202ENST00000395573 EHD4Q9H223 541 aa13.4□□□□□ -0.26
CNIH1-202ENST00000395573 PAK6Q9NQU5 681 aaPredicted RBP13.4□□□□□ -0.26
CNIH1-202ENST00000395573 DDX19BQ9UMR2 479 aa13.4□□□□□ -0.26
CNIH1-202ENST00000395573 COG6Q9Y2V7 657 aa13.4□□□□□ -0.26
CNIH1-202ENST00000395573 PEX10O60683 326 aa13.39□□□□□ -0.27
CNIH1-202ENST00000395573 IFIT2P09913 472 aaKnown RBP13.39□□□□□ -0.27
CNIH1-202ENST00000395573 RAB3GAP1Q15042 981 aa13.39□□□□□ -0.27
CNIH1-202ENST00000395573 ZYXQ15942 572 aaKnown RBP13.39□□□□□ -0.27
CNIH1-202ENST00000395573 CERKLQ49MI3 558 aaPredicted RBP13.39□□□□□ -0.27
CNIH1-202ENST00000395573 TATDN1Q6P1N9 297 aa13.39□□□□□ -0.27
CNIH1-202ENST00000395573 TTC6Q86TZ1 520 aa13.39□□□□□ -0.27
CNIH1-202ENST00000395573 RPAP2Q8IXW5 612 aaPredicted RBP13.39□□□□□ -0.27
CNIH1-202ENST00000395573 GPRC5AQ8NFJ5 357 aa13.39□□□□□ -0.27
CNIH1-202ENST00000395573 KIF1BPQ96EK5 621 aa13.39□□□□□ -0.27
CNIH1-202ENST00000395573 DNAJC2Q99543 621 aaKnown RBP13.39□□□□□ -0.27
CNIH1-202ENST00000395573 PAGR1Q9BTK6 254 aa13.39□□□□□ -0.27
CNIH1-202ENST00000395573 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.39□□□□□ -0.277e-7■■■□□ 15.6
CNIH1-202ENST00000395573 GJD2Q9UKL4 321 aa13.39□□□□□ -0.27
CNIH1-202ENST00000395573 ZNF236Q9UL36 1845 aa13.39□□□□□ -0.27
CNIH1-202ENST00000395573 POTEB2H3BUK9 544 aa13.38□□□□□ -0.27
CNIH1-202ENST00000395573 GOLIM4O00461 696 aa13.38□□□□□ -0.27
CNIH1-202ENST00000395573 PDE6AP16499 860 aa13.38□□□□□ -0.27
CNIH1-202ENST00000395573 CAPN2P17655 700 aa13.38□□□□□ -0.27
CNIH1-202ENST00000395573 FXR1P51114 621 aaKnown RBP eCLIP13.38□□□□□ -0.27
CNIH1-202ENST00000395573 ERVK-9P63128 1117 aa13.38□□□□□ -0.27
CNIH1-202ENST00000395573 ERVK-24P63145 666 aa13.38□□□□□ -0.27
CNIH1-202ENST00000395573 ABCB5Q2M3G0 1257 aa13.38□□□□□ -0.27
CNIH1-202ENST00000395573 SLC9C2Q5TAH2 1124 aa13.38□□□□□ -0.27
CNIH1-202ENST00000395573 CCAR1Q8IX12 1150 aaKnown RBP13.38□□□□□ -0.27
CNIH1-202ENST00000395573 GTF3C2Q8WUA4 911 aaPredicted RBP13.38□□□□□ -0.27
CNIH1-202ENST00000395573 RIOK1Q9BRS2 568 aaKnown RBP13.38□□□□□ -0.27
CNIH1-202ENST00000395573 CRNKL1Q9BZJ0 848 aaKnown RBP13.38□□□□□ -0.27
CNIH1-202ENST00000395573 TXNRD2Q9NNW7 524 aa13.38□□□□□ -0.27
CNIH1-202ENST00000395573 EMILIN3Q9NT22 766 aa13.38□□□□□ -0.27
CNIH1-202ENST00000395573 POLR3DP05423 398 aaPredicted RBP13.37□□□□□ -0.27
CNIH1-202ENST00000395573 CYP2B6P20813 491 aa13.37□□□□□ -0.27
CNIH1-202ENST00000395573 MAPK4P31152 587 aa13.37□□□□□ -0.27
CNIH1-202ENST00000395573 SHMT1P34896 483 aa13.37□□□□□ -0.27
CNIH1-202ENST00000395573 PLCD1P51178 756 aa13.37□□□□□ -0.27
CNIH1-202ENST00000395573 PDE3AQ14432 1141 aa13.37□□□□□ -0.27
CNIH1-202ENST00000395573 SIRT2Q8IXJ6 389 aa13.37□□□□□ -0.27
CNIH1-202ENST00000395573 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.37□□□□□ -0.27
CNIH1-202ENST00000395573 SOCS4Q8WXH5 440 aa13.37□□□□□ -0.27
CNIH1-202ENST00000395573 NUDT12Q9BQG2 462 aa13.37□□□□□ -0.27
CNIH1-202ENST00000395573 CRISPLD2Q9H0B8 497 aa13.37□□□□□ -0.27
CNIH1-202ENST00000395573 CABP5Q9NP86 173 aa13.37□□□□□ -0.27
CNIH1-202ENST00000395573 ZBTB40Q9NUA8 1239 aa13.37□□□□□ -0.27
CNIH1-202ENST00000395573 RBPJLQ9UBG7 517 aa13.37□□□□□ -0.27
CNIH1-202ENST00000395573 NR2E3Q9Y5X4 410 aa13.37□□□□□ -0.27
CNIH1-202ENST00000395573 SMCHD1A6NHR9 2005 aa13.37□□□□□ -0.27
CNIH1-202ENST00000395573 GREB1LQ9C091 1923 aaPredicted RBP13.37□□□□□ -0.27
CNIH1-202ENST00000395573 RPTORQ8N122 1335 aa13.37□□□□□ -0.27
CNIH1-202ENST00000395573 ZNF532Q9HCE3 1301 aa13.37□□□□□ -0.27
CNIH1-202ENST00000395573 RAB11FIP3O75154 756 aa13.36□□□□□ -0.27
CNIH1-202ENST00000395573 USP14P54578 494 aa13.36□□□□□ -0.27
CNIH1-202ENST00000395573 TRIM32Q13049 653 aa13.36□□□□□ -0.27
CNIH1-202ENST00000395573 TRIB2Q92519 343 aa13.36□□□□□ -0.27
CNIH1-202ENST00000395573 C12orf42Q96LP6 360 aa13.36□□□□□ -0.27
CNIH1-202ENST00000395573 CHMP4BQ9H444 224 aaKnown RBP13.36□□□□□ -0.27
CNIH1-202ENST00000395573 CWC22Q9HCG8 908 aaKnown RBP13.36□□□□□ -0.27
CNIH1-202ENST00000395573 HMX1Q9NP08 348 aaPredicted RBP13.36□□□□□ -0.27
CNIH1-202ENST00000395573 MCM9Q9NXL9 1143 aa13.36□□□□□ -0.27
CNIH1-202ENST00000395573 LAMA2P24043 3122 aaKnown RBP13.36□□□□□ -0.27
CNIH1-202ENST00000395573 TCRBV5S4A2TA0A5A2 114 aa13.35□□□□□ -0.27
CNIH1-202ENST00000395573 USP17L15C9J2P7 530 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms