RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 PCDHA5Q9Y5H7 936 aa17.59■□□□□ 0.41
UBE2D3-207ENST00000394801 CNTNAP5Q8WYK1 1306 aa17.59■□□□□ 0.41
UBE2D3-207ENST00000394801 LDHBP07195 334 aaKnown RBP17.59■□□□□ 0.41
UBE2D3-207ENST00000394801 CYP2D6P10635 497 aa17.59■□□□□ 0.41
UBE2D3-207ENST00000394801 PPP4CP60510 307 aa17.59■□□□□ 0.41
UBE2D3-207ENST00000394801 NPY5RQ15761 445 aa17.59■□□□□ 0.41
UBE2D3-207ENST00000394801 C12orf60Q5U649 245 aa17.59■□□□□ 0.41
UBE2D3-207ENST00000394801 SRBD1Q8N5C6 995 aaKnown RBP17.59■□□□□ 0.41
UBE2D3-207ENST00000394801 CTCFLQ8NI51 663 aaPredicted RBP17.59■□□□□ 0.41
UBE2D3-207ENST00000394801 TNFRSF25Q93038 417 aa17.59■□□□□ 0.41
UBE2D3-207ENST00000394801 LRRC4BQ9NT99 713 aa17.59■□□□□ 0.41
UBE2D3-207ENST00000394801 TRIM75PA6NK02 468 aa17.58■□□□□ 0.41
UBE2D3-207ENST00000394801 FAM47AQ5JRC9 791 aa17.58■□□□□ 0.41
UBE2D3-207ENST00000394801 RCSD1Q6JBY9 416 aa17.58■□□□□ 0.41
UBE2D3-207ENST00000394801 ANKS1AQ92625 1134 aa17.58■□□□□ 0.41
UBE2D3-207ENST00000394801 XPO4Q9C0E2 1151 aaKnown RBP17.58■□□□□ 0.41
UBE2D3-207ENST00000394801 BCL11BQ9C0K0 894 aaPredicted RBP17.58■□□□□ 0.41
UBE2D3-207ENST00000394801 MCM9Q9NXL9 1143 aa17.58■□□□□ 0.41
UBE2D3-207ENST00000394801 MYO1BO43795 1136 aa17.58■□□□□ 0.4
UBE2D3-207ENST00000394801 NMT2O60551 498 aa17.58■□□□□ 0.4
UBE2D3-207ENST00000394801 BMP15O95972 392 aa17.58■□□□□ 0.4
UBE2D3-207ENST00000394801 GSTO1P78417 241 aa17.58■□□□□ 0.4
UBE2D3-207ENST00000394801 ARID5BQ14865 1188 aa17.58■□□□□ 0.4
UBE2D3-207ENST00000394801 CRY2Q49AN0 593 aa17.58■□□□□ 0.4
UBE2D3-207ENST00000394801 SPECC1Q5M775 1068 aa17.58■□□□□ 0.4
UBE2D3-207ENST00000394801 PRR5LQ6MZQ0 368 aa17.58■□□□□ 0.4
UBE2D3-207ENST00000394801 POLR2DO15514 142 aaKnown RBP17.57■□□□□ 0.4
UBE2D3-207ENST00000394801 SARSP49591 514 aaKnown RBP17.57■□□□□ 0.4
UBE2D3-207ENST00000394801 MYL5Q02045 173 aa17.57■□□□□ 0.4
UBE2D3-207ENST00000394801 EARS2Q5JPH6 523 aaKnown RBP17.57■□□□□ 0.4
UBE2D3-207ENST00000394801 ISM2Q6H9L7 571 aa17.57■□□□□ 0.4
UBE2D3-207ENST00000394801 ZNF804AQ7Z570 1209 aa17.57■□□□□ 0.4
UBE2D3-207ENST00000394801 FILIP1Q7Z7B0 1213 aa17.57■□□□□ 0.4
UBE2D3-207ENST00000394801 IFNKQ9P0W0 207 aa17.57■□□□□ 0.4
UBE2D3-207ENST00000394801 JAG2Q9Y219 1238 aa17.57■□□□□ 0.4
UBE2D3-207ENST00000394801 ROBO3Q96MS0 1386 aa17.57■□□□□ 0.4
UBE2D3-207ENST00000394801 TSPY2A6NKD2 308 aa17.57■□□□□ 0.4
UBE2D3-207ENST00000394801 USP17L8P0C7I0 530 aa17.57■□□□□ 0.4
UBE2D3-207ENST00000394801 HSPA1LP34931 641 aa17.57■□□□□ 0.4
UBE2D3-207ENST00000394801 CCZ1BP86790 482 aa17.57■□□□□ 0.4
UBE2D3-207ENST00000394801 CCZ1P86791 482 aaPredicted RBP17.57■□□□□ 0.4
UBE2D3-207ENST00000394801 DHX8Q14562 1220 aaKnown RBP17.57■□□□□ 0.4
UBE2D3-207ENST00000394801 KANK3Q6NY19 840 aa17.57■□□□□ 0.4
UBE2D3-207ENST00000394801 DGKHQ86XP1 1220 aa17.57■□□□□ 0.4
UBE2D3-207ENST00000394801 BRMS1Q9HCU9 246 aa17.57■□□□□ 0.4
UBE2D3-207ENST00000394801 KCND1Q9NSA2 647 aa17.57■□□□□ 0.4
UBE2D3-207ENST00000394801 BMP6P22004 513 aa17.56■□□□□ 0.4
UBE2D3-207ENST00000394801 POSTNQ15063 836 aa17.56■□□□□ 0.4
UBE2D3-207ENST00000394801 OLFM4Q6UX06 510 aa17.56■□□□□ 0.4
UBE2D3-207ENST00000394801 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.55■□□□□ 0.4
UBE2D3-207ENST00000394801 hCG_1642624A0A1W2PR95 340 aa17.55■□□□□ 0.4
UBE2D3-207ENST00000394801 BAG3O95817 575 aa17.55■□□□□ 0.4
UBE2D3-207ENST00000394801 SKILP12757 684 aa17.55■□□□□ 0.4
UBE2D3-207ENST00000394801 FANCCQ00597 558 aa17.55■□□□□ 0.4
UBE2D3-207ENST00000394801 SPATA20Q8TB22 786 aa17.55■□□□□ 0.4
UBE2D3-207ENST00000394801 CSRNP2Q9H175 543 aa17.55■□□□□ 0.4
UBE2D3-207ENST00000394801 SERTAD1Q9UHV2 236 aa17.55■□□□□ 0.4
UBE2D3-207ENST00000394801 FAM205CA6NFA0 338 aa17.55■□□□□ 0.4
UBE2D3-207ENST00000394801 FOXN1O15353 648 aa17.55■□□□□ 0.4
UBE2D3-207ENST00000394801 ACTN4O43707 911 aaKnown RBP17.55■□□□□ 0.4
UBE2D3-207ENST00000394801 LDHCP07864 332 aa17.55■□□□□ 0.4
UBE2D3-207ENST00000394801 PFKFB3Q16875 520 aaPredicted RBP17.55■□□□□ 0.4
UBE2D3-207ENST00000394801 FERMT2Q96AC1 680 aa17.55■□□□□ 0.4
UBE2D3-207ENST00000394801 SMC2O95347 1197 aa17.54■□□□□ 0.4
UBE2D3-207ENST00000394801 SCG2P13521 617 aa17.54■□□□□ 0.4
UBE2D3-207ENST00000394801 GYS1P13807 737 aa17.54■□□□□ 0.4
UBE2D3-207ENST00000394801 LMOD1P29536 600 aaPredicted RBP17.54■□□□□ 0.4
UBE2D3-207ENST00000394801 KIF5BP33176 963 aa17.54■□□□□ 0.4
UBE2D3-207ENST00000394801 CCDC178Q5BJE1 867 aa17.54■□□□□ 0.4
UBE2D3-207ENST00000394801 SLC51AQ86UW1 340 aa17.54■□□□□ 0.4
UBE2D3-207ENST00000394801 CERS3Q8IU89 383 aa17.54■□□□□ 0.4
UBE2D3-207ENST00000394801 TRIML1Q8N9V2 468 aa17.54■□□□□ 0.4
UBE2D3-207ENST00000394801 SH3RF3Q8TEJ3 882 aaPredicted RBP17.54■□□□□ 0.4
UBE2D3-207ENST00000394801 IL17RBQ9NRM6 502 aa17.54■□□□□ 0.4
UBE2D3-207ENST00000394801 TCP11L1Q9NUJ3 509 aa17.54■□□□□ 0.4
UBE2D3-207ENST00000394801 UBR3Q6ZT12 1888 aa17.54■□□□□ 0.4
UBE2D3-207ENST00000394801 ATP2B1P20020 1258 aa17.54■□□□□ 0.4
UBE2D3-207ENST00000394801 USP5P45974 858 aa17.54■□□□□ 0.4
UBE2D3-207ENST00000394801 TFAP4Q01664 338 aa17.54■□□□□ 0.4
UBE2D3-207ENST00000394801 GRIK5Q16478 980 aa17.54■□□□□ 0.4
UBE2D3-207ENST00000394801 SEPT12Q8IYM1 358 aa17.54■□□□□ 0.4
UBE2D3-207ENST00000394801 MAN1B1Q9UKM7 699 aa17.54■□□□□ 0.4
UBE2D3-207ENST00000394801 IL1R1P14778 569 aa17.53■□□□□ 0.4
UBE2D3-207ENST00000394801 TRAPPC10P48553 1259 aa17.53■□□□□ 0.4
UBE2D3-207ENST00000394801 GPSM2P81274 684 aa17.53■□□□□ 0.4
UBE2D3-207ENST00000394801 USP49Q70CQ1 688 aa17.53■□□□□ 0.4
UBE2D3-207ENST00000394801 MLKLQ8NB16 471 aa17.53■□□□□ 0.4
UBE2D3-207ENST00000394801 RPGRQ92834 1020 aaKnown RBP17.53■□□□□ 0.4
UBE2D3-207ENST00000394801 ATP1A3P13637 1013 aa17.53■□□□□ 0.4
UBE2D3-207ENST00000394801 ATP2B4P23634 1241 aa17.53■□□□□ 0.4
UBE2D3-207ENST00000394801 MORC3Q14149 939 aa17.53■□□□□ 0.4
UBE2D3-207ENST00000394801 CCDC150Q8NCX0 1101 aa17.53■□□□□ 0.4
UBE2D3-207ENST00000394801 KAT14Q9H8E8 782 aa17.53■□□□□ 0.4
UBE2D3-207ENST00000394801 CD209Q9NNX6 404 aa17.53■□□□□ 0.4
UBE2D3-207ENST00000394801 AFF2P51816 1311 aa17.52■□□□□ 0.4
UBE2D3-207ENST00000394801 DIXDC1Q155Q3 683 aa17.52■□□□□ 0.4
UBE2D3-207ENST00000394801 CBFA2T2O43439 604 aa17.52■□□□□ 0.39
UBE2D3-207ENST00000394801 SERPINB2P05120 415 aa17.52■□□□□ 0.39
UBE2D3-207ENST00000394801 AMOTL1Q8IY63 956 aa17.52■□□□□ 0.39
UBE2D3-207ENST00000394801 SMARCE1Q969G3 411 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms