RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 CDC23Q9UJX2 597 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 TLL1O43897 1013 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 SNX16P57768 344 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 PURAQ00577 322 aaKnown RBP4.17□□□□□ -1.74
XRN1-202ENST00000392981 ALDH1L2Q3SY69 923 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 MTDHQ86UE4 582 aaKnown RBP4.17□□□□□ -1.74
XRN1-202ENST00000392981 MIER2Q8N344 545 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 RTFDC1Q9BY42 306 aaPredicted RBP4.17□□□□□ -1.74
XRN1-202ENST00000392981 IFT22Q9H7X7 185 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 IFT122Q9HBG6 1241 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 ABI2Q9NYB9 513 aaPredicted RBP4.17□□□□□ -1.74
XRN1-202ENST00000392981 CORO2BQ9UQ03 480 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 BRINP1O60477 761 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 FGAP02671 866 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 OAS2P29728 719 aaKnown RBP4.17□□□□□ -1.74
XRN1-202ENST00000392981 AK2P54819 239 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 PLIN5Q00G26 463 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 CLCQ05315 142 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 CCDC96Q2M329 555 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 RPAINQ86UA6 219 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 FERMT2Q96AC1 680 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 THG1LQ9NWX6 298 aaKnown RBP4.17□□□□□ -1.74
XRN1-202ENST00000392981 MAPRE3Q9UPY8 281 aa4.17□□□□□ -1.74
XRN1-202ENST00000392981 FAM170AA1A519 330 aa4.16□□□□□ -1.74
XRN1-202ENST00000392981 ARAFP10398 606 aa4.16□□□□□ -1.74
XRN1-202ENST00000392981 CNTFP26441 200 aa4.16□□□□□ -1.74
XRN1-202ENST00000392981 SARSP49591 514 aaKnown RBP4.16□□□□□ -1.74
XRN1-202ENST00000392981 SCNN1DP51172 638 aa4.16□□□□□ -1.74
XRN1-202ENST00000392981 ARSDP51689 593 aa4.16□□□□□ -1.74
XRN1-202ENST00000392981 PCBP1Q15365 356 aaKnown RBP eCLIP4.16□□□□□ -1.74
XRN1-202ENST00000392981 CCDC38Q502W7 563 aa4.16□□□□□ -1.74
XRN1-202ENST00000392981 PHTF1Q9UMS5 762 aa4.16□□□□□ -1.74
XRN1-202ENST00000392981 PCDHB5Q9Y5E4 795 aa4.16□□□□□ -1.74
XRN1-202ENST00000392981 YOD1Q5VVQ6 348 aaPredicted RBP4.16□□□□□ -1.74
XRN1-202ENST00000392981 OR6P1Q8NGX9 317 aa4.16□□□□□ -1.74
XRN1-202ENST00000392981 AHCYL2Q96HN2 611 aaKnown RBP4.16□□□□□ -1.74
XRN1-202ENST00000392981 FGD4Q96M96 766 aa4.16□□□□□ -1.74
XRN1-202ENST00000392981 GTPBP4Q9BZE4 634 aaKnown RBP4.16□□□□□ -1.74
XRN1-202ENST00000392981 ANTXR1Q9H6X2 564 aa4.16□□□□□ -1.74
XRN1-202ENST00000392981 ZNF395Q9H8N7 513 aaPredicted RBP4.16□□□□□ -1.74
XRN1-202ENST00000392981 KRT84Q9NSB2 600 aa4.16□□□□□ -1.74
XRN1-202ENST00000392981 ANKRD6Q9Y2G4 727 aa4.16□□□□□ -1.74
XRN1-202ENST00000392981 FCF1Q9Y324 198 aaKnown RBP4.16□□□□□ -1.74
XRN1-202ENST00000392981 IFIT5Q13325 482 aaKnown RBP4.16□□□□□ -1.74
XRN1-202ENST00000392981 PPP2R5CQ13362 524 aa4.16□□□□□ -1.74
XRN1-202ENST00000392981 MORC3Q14149 939 aa4.16□□□□□ -1.74
XRN1-202ENST00000392981 ZNF460Q14592 562 aa4.16□□□□□ -1.74
XRN1-202ENST00000392981 ATP13A4Q4VNC1 1196 aa4.16□□□□□ -1.74
XRN1-202ENST00000392981 PPP4R3AQ6IN85 833 aa4.16□□□□□ -1.74
XRN1-202ENST00000392981 FAM196AQ6ZSG2 479 aa4.16□□□□□ -1.74
XRN1-202ENST00000392981 LSRQ86X29 649 aaPredicted RBP4.16□□□□□ -1.74
XRN1-202ENST00000392981 OR8H2Q8N162 312 aa4.16□□□□□ -1.74
XRN1-202ENST00000392981 PHC3Q8NDX5 983 aa4.16□□□□□ -1.74
XRN1-202ENST00000392981 PLD4Q96BZ4 506 aa4.16□□□□□ -1.74
XRN1-202ENST00000392981 HSPBAP1Q96EW2 488 aa4.16□□□□□ -1.74
XRN1-202ENST00000392981 CRB3Q9BUF7 120 aa4.16□□□□□ -1.74
XRN1-202ENST00000392981 CERS4Q9HA82 394 aa4.16□□□□□ -1.74
XRN1-202ENST00000392981 CABP5Q9NP86 173 aa4.16□□□□□ -1.74
XRN1-202ENST00000392981 DDX20Q9UHI6 824 aaKnown RBP4.16□□□□□ -1.74
XRN1-202ENST00000392981 PCDHGB3Q9Y5G1 929 aa4.16□□□□□ -1.74
XRN1-202ENST00000392981 TNPO3Q9Y5L0 923 aaKnown RBP4.16□□□□□ -1.74
XRN1-202ENST00000392981 H3BRJ5 948 aa4.16□□□□□ -1.74
XRN1-202ENST00000392981 CLGNO14967 610 aa4.16□□□□□ -1.74
XRN1-202ENST00000392981 VIL1P09327 827 aaKnown RBP4.16□□□□□ -1.74
XRN1-202ENST00000392981 HSP90AA2PQ14568 343 aaPredicted RBP4.16□□□□□ -1.74
XRN1-202ENST00000392981 AKAP4Q5JQC9 854 aa4.16□□□□□ -1.74
XRN1-202ENST00000392981 HEATR6Q6AI08 1181 aaKnown RBP4.16□□□□□ -1.74
XRN1-202ENST00000392981 PTCRAQ6ISU1 281 aaPredicted RBP4.16□□□□□ -1.74
XRN1-202ENST00000392981 SH3BP5LQ7L8J4 393 aa4.16□□□□□ -1.74
XRN1-202ENST00000392981 IFT80Q9P2H3 777 aaPredicted RBP4.16□□□□□ -1.74
XRN1-202ENST00000392981 RRN3P2A6NIE6 340 aa4.15□□□□□ -1.74
XRN1-202ENST00000392981 CPP00450 1065 aa4.15□□□□□ -1.74
XRN1-202ENST00000392981 APOA4P06727 396 aa4.15□□□□□ -1.74
XRN1-202ENST00000392981 NAT2P11245 290 aa4.15□□□□□ -1.74
XRN1-202ENST00000392981 SYDE2Q5VT97 1194 aa4.15□□□□□ -1.74
XRN1-202ENST00000392981 ERAP2Q6P179 960 aa4.15□□□□□ -1.74
XRN1-202ENST00000392981 NSMFQ6X4W1 530 aa4.15□□□□□ -1.74
XRN1-202ENST00000392981 ZBTB38Q8NAP3 1195 aaPredicted RBP4.15□□□□□ -1.74
XRN1-202ENST00000392981 ALDH8A1Q9H2A2 487 aaPredicted RBP4.15□□□□□ -1.74
XRN1-202ENST00000392981 TTLL3Q9Y4R7 772 aa4.15□□□□□ -1.74
XRN1-202ENST00000392981 RHOBTB3O94955 611 aa4.15□□□□□ -1.74
XRN1-202ENST00000392981 SRGAP2CP0DJJ0 459 aa4.15□□□□□ -1.74
XRN1-202ENST00000392981 PLCG1P19174 1290 aa4.15□□□□□ -1.74
XRN1-202ENST00000392981 IREB2P48200 963 aaKnown RBP4.15□□□□□ -1.74
XRN1-202ENST00000392981 PSMD6Q15008 389 aa4.15□□□□□ -1.74
XRN1-202ENST00000392981 LIX1LQ8IVB5 337 aa4.15□□□□□ -1.74
XRN1-202ENST00000392981 TGFBRAP1Q8WUH2 860 aa4.15□□□□□ -1.74
XRN1-202ENST00000392981 CHAMP1Q96JM3 812 aa4.15□□□□□ -1.74
XRN1-202ENST00000392981 NSUN5Q96P11 429 aaKnown RBP4.15□□□□□ -1.74
XRN1-202ENST00000392981 SEC62Q99442 399 aaKnown RBP4.15□□□□□ -1.74
XRN1-202ENST00000392981 KIF2CQ99661 725 aa4.15□□□□□ -1.74
XRN1-202ENST00000392981 SARGQ9BW04 601 aa4.15□□□□□ -1.74
XRN1-202ENST00000392981 PUS7LQ9H0K6 701 aaKnown RBP4.15□□□□□ -1.74
XRN1-202ENST00000392981 OSBPL3Q9H4L5 887 aa4.15□□□□□ -1.74
XRN1-202ENST00000392981 EFCC1Q9HA90 598 aa4.15□□□□□ -1.74
XRN1-202ENST00000392981 USP3Q9Y6I4 520 aa4.15□□□□□ -1.74
XRN1-202ENST00000392981 PRAMEF27A3QJZ7 478 aa4.15□□□□□ -1.75
XRN1-202ENST00000392981 METTL12A8MUP2 240 aa4.15□□□□□ -1.75
XRN1-202ENST00000392981 GFPT2O94808 682 aa4.15□□□□□ -1.75
XRN1-202ENST00000392981 NCAPHQ15003 741 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms