RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 LENG1Q96BZ8 264 aaPredicted RBP4.24□□□□□ -1.73
TRAJ40-201ENST00000390497 TRIM11Q96F44 468 aa4.24□□□□□ -1.73
TRAJ40-201ENST00000390497 NACC1Q96RE7 527 aa4.24□□□□□ -1.73
TRAJ40-201ENST00000390497 FOXQ1Q9C009 403 aa4.24□□□□□ -1.73
TRAJ40-201ENST00000390497 FANCLQ9NW38 375 aa4.24□□□□□ -1.73
TRAJ40-201ENST00000390497 SUCOQ9UBS9 1254 aaKnown RBP4.24□□□□□ -1.73
TRAJ40-201ENST00000390497 ZMYM5Q9UJ78 669 aa4.24□□□□□ -1.73
TRAJ40-201ENST00000390497 AP4E1Q9UPM8 1137 aa4.24□□□□□ -1.73
TRAJ40-201ENST00000390497 ANKRD34BA5PLL1 514 aa4.23□□□□□ -1.73
TRAJ40-201ENST00000390497 CLEC3AO75596 197 aa4.23□□□□□ -1.73
TRAJ40-201ENST00000390497 ARHGEF15O94989 841 aa4.23□□□□□ -1.73
TRAJ40-201ENST00000390497 USP11P51784 963 aa4.23□□□□□ -1.73
TRAJ40-201ENST00000390497 SLBPQ14493 270 aaKnown RBP eCLIP4.23□□□□□ -1.73
TRAJ40-201ENST00000390497 ZYXQ15942 572 aaKnown RBP4.23□□□□□ -1.73
TRAJ40-201ENST00000390497 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.23□□□□□ -1.73
TRAJ40-201ENST00000390497 ALYREFQ86V81 257 aaKnown RBP4.23□□□□□ -1.73
TRAJ40-201ENST00000390497 GIMAP7Q8NHV1 300 aa4.23□□□□□ -1.73
TRAJ40-201ENST00000390497 CYB5D2Q8WUJ1 264 aa4.23□□□□□ -1.73
TRAJ40-201ENST00000390497 IPO9Q96P70 1041 aaKnown RBP4.23□□□□□ -1.73
TRAJ40-201ENST00000390497 KIF2CQ99661 725 aa4.23□□□□□ -1.73
TRAJ40-201ENST00000390497 SPATA9Q9BWV2 254 aa4.23□□□□□ -1.73
TRAJ40-201ENST00000390497 SPC25Q9HBM1 224 aa4.23□□□□□ -1.73
TRAJ40-201ENST00000390497 CEP131Q9UPN4 1083 aa4.23□□□□□ -1.73
TRAJ40-201ENST00000390497 A0A087WZG4 1122 aa4.22□□□□□ -1.73
TRAJ40-201ENST00000390497 F8W735 103 aaPredicted RBP4.22□□□□□ -1.73
TRAJ40-201ENST00000390497 SUSD5O60279 629 aa4.22□□□□□ -1.73
TRAJ40-201ENST00000390497 DNAJA2O60884 412 aa4.22□□□□□ -1.73
TRAJ40-201ENST00000390497 SPATA31C1P0DKV0 1188 aa4.22□□□□□ -1.73
TRAJ40-201ENST00000390497 HCLS1P14317 486 aaPredicted RBP4.22□□□□□ -1.73
TRAJ40-201ENST00000390497 DRD2P14416 443 aa4.22□□□□□ -1.73
TRAJ40-201ENST00000390497 NTF4P34130 210 aa4.22□□□□□ -1.73
TRAJ40-201ENST00000390497 MAP7Q14244 749 aa4.22□□□□□ -1.73
TRAJ40-201ENST00000390497 TREML4Q6UXN2 200 aa4.22□□□□□ -1.73
TRAJ40-201ENST00000390497 KIAA0907Q7Z7F0 614 aaPredicted RBP4.22□□□□□ -1.73
TRAJ40-201ENST00000390497 ZBTB38Q8NAP3 1195 aaPredicted RBP4.22□□□□□ -1.73
TRAJ40-201ENST00000390497 WHAMMQ8TF30 809 aa4.22□□□□□ -1.73
TRAJ40-201ENST00000390497 ISL2Q96A47 359 aa4.22□□□□□ -1.73
TRAJ40-201ENST00000390497 SLC6A18Q96N87 628 aa4.22□□□□□ -1.73
TRAJ40-201ENST00000390497 FEZ1Q99689 392 aa4.22□□□□□ -1.73
TRAJ40-201ENST00000390497 AKTIPQ9H8T0 292 aa4.22□□□□□ -1.73
TRAJ40-201ENST00000390497 ESYT3A0FGR9 886 aa4.21□□□□□ -1.74
TRAJ40-201ENST00000390497 DNAJC6O75061 913 aa4.21□□□□□ -1.74
TRAJ40-201ENST00000390497 PPM1BO75688 479 aa4.21□□□□□ -1.74
TRAJ40-201ENST00000390497 WISP1O95388 367 aa4.21□□□□□ -1.74
TRAJ40-201ENST00000390497 CYP7A1P22680 504 aa4.21□□□□□ -1.74
TRAJ40-201ENST00000390497 GYS2P54840 703 aa4.21□□□□□ -1.74
TRAJ40-201ENST00000390497 SNRPNP63162 240 aaKnown RBP4.21□□□□□ -1.74
TRAJ40-201ENST00000390497 RNF4P78317 190 aa4.21□□□□□ -1.74
TRAJ40-201ENST00000390497 IGBP1P78318 339 aa4.21□□□□□ -1.74
TRAJ40-201ENST00000390497 HSP90AA2PQ14568 343 aaPredicted RBP4.21□□□□□ -1.74
TRAJ40-201ENST00000390497 PTPROQ16827 1216 aa4.21□□□□□ -1.74
TRAJ40-201ENST00000390497 UVSSAQ2YD98 709 aa4.21□□□□□ -1.74
TRAJ40-201ENST00000390497 SV2CQ496J9 727 aa4.21□□□□□ -1.74
TRAJ40-201ENST00000390497 TMEM67Q5HYA8 995 aa4.21□□□□□ -1.74
TRAJ40-201ENST00000390497 PRAMEF13Q5VWM6 474 aa4.21□□□□□ -1.74
TRAJ40-201ENST00000390497 HEATR6Q6AI08 1181 aaKnown RBP4.21□□□□□ -1.74
TRAJ40-201ENST00000390497 SPATC1Q76KD6 591 aa4.21□□□□□ -1.74
TRAJ40-201ENST00000390497 SCUBE1Q8IWY4 988 aa4.21□□□□□ -1.74
TRAJ40-201ENST00000390497 TMEM192Q8IY95 271 aa4.21□□□□□ -1.74
TRAJ40-201ENST00000390497 C2CD4AQ8NCU7 369 aaPredicted RBP4.21□□□□□ -1.74
TRAJ40-201ENST00000390497 KLHL6Q8WZ60 621 aa4.21□□□□□ -1.74
TRAJ40-201ENST00000390497 COX4I2Q96KJ9 171 aa4.21□□□□□ -1.74
TRAJ40-201ENST00000390497 GBP3Q9H0R5 595 aa4.21□□□□□ -1.74
TRAJ40-201ENST00000390497 ACSS3Q9H6R3 686 aa4.21□□□□□ -1.74
TRAJ40-201ENST00000390497 FBRSQ9HAH7 460 aa4.21□□□□□ -1.74
TRAJ40-201ENST00000390497 FAM105AQ9NUU6 356 aa4.21□□□□□ -1.74
TRAJ40-201ENST00000390497 PFDN2Q9UHV9 154 aa4.21□□□□□ -1.74
TRAJ40-201ENST00000390497 PCDHB10Q9UN67 800 aa4.21□□□□□ -1.74
TRAJ40-201ENST00000390497 NOP58Q9Y2X3 529 aaKnown RBP4.21□□□□□ -1.74
TRAJ40-201ENST00000390497 NOP56O00567 594 aaKnown RBP4.2□□□□□ -1.74
TRAJ40-201ENST00000390497 GAS2O43903 313 aaKnown RBP4.2□□□□□ -1.74
TRAJ40-201ENST00000390497 UBOX5O94941 541 aa4.2□□□□□ -1.74
TRAJ40-201ENST00000390497 APBA3O96018 575 aa4.2□□□□□ -1.74
TRAJ40-201ENST00000390497 NEFMP07197 916 aa4.2□□□□□ -1.74
TRAJ40-201ENST00000390497 CDK11BP21127 795 aaKnown RBP4.2□□□□□ -1.74
TRAJ40-201ENST00000390497 ETV3P41162 512 aa4.2□□□□□ -1.74
TRAJ40-201ENST00000390497 ANAPC15P60006 121 aa4.2□□□□□ -1.74
TRAJ40-201ENST00000390497 NKG7Q16617 165 aa4.2□□□□□ -1.74
TRAJ40-201ENST00000390497 SLC10A6Q3KNW5 377 aa4.2□□□□□ -1.74
TRAJ40-201ENST00000390497 MRM1Q6IN84 353 aaKnown RBP4.2□□□□□ -1.74
TRAJ40-201ENST00000390497 POMZP3Q6PJE2 187 aa4.2□□□□□ -1.74
TRAJ40-201ENST00000390497 ADAT2Q7Z6V5 191 aaKnown RBP4.2□□□□□ -1.74
TRAJ40-201ENST00000390497 CCDC144CPQ8IYA2 1237 aa4.2□□□□□ -1.74
TRAJ40-201ENST00000390497 CRACR2BQ8N4Y2 399 aaPredicted RBP4.2□□□□□ -1.74
TRAJ40-201ENST00000390497 BAHD1Q8TBE0 780 aaPredicted RBP4.2□□□□□ -1.74
TRAJ40-201ENST00000390497 EZH1Q92800 747 aaPredicted RBP4.2□□□□□ -1.74
TRAJ40-201ENST00000390497 SCARF2Q96GP6 870 aaPredicted RBP4.2□□□□□ -1.74
TRAJ40-201ENST00000390497 RCC1LQ96I51 464 aaKnown RBP4.2□□□□□ -1.74
TRAJ40-201ENST00000390497 FBXL18Q96ME1 805 aa4.2□□□□□ -1.74
TRAJ40-201ENST00000390497 IFT57Q9NWB7 429 aa4.2□□□□□ -1.74
TRAJ40-201ENST00000390497 PRR13Q9NZ81 148 aa4.2□□□□□ -1.74
TRAJ40-201ENST00000390497 LRP2BPQ9P2M1 347 aa4.2□□□□□ -1.74
TRAJ40-201ENST00000390497 USP21Q9UK80 565 aa4.2□□□□□ -1.74
TRAJ40-201ENST00000390497 PLAAQ9Y263 795 aa4.2□□□□□ -1.74
TRAJ40-201ENST00000390497 ACTL7BQ9Y614 415 aa4.2□□□□□ -1.74
TRAJ40-201ENST00000390497 DNAJC25-GNG10A0A024R161 153 aa4.19□□□□□ -1.74
TRAJ40-201ENST00000390497 hCG_2014768A0A024R1R8 64 aa4.19□□□□□ -1.74
TRAJ40-201ENST00000390497 B2RBV5 119 aa4.19□□□□□ -1.74
TRAJ40-201ENST00000390497 DIAPH1O60610 1272 aaKnown RBP4.19□□□□□ -1.74
TRAJ40-201ENST00000390497 RFPL3O75679 317 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms