RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 TMCO3Q6UWJ1 677 aa14.7□□□□□ -0.06
USP11-204ENST00000377107 SLC51AQ86UW1 340 aa14.7□□□□□ -0.06
USP11-204ENST00000377107 MARCH10Q8NA82 808 aaPredicted RBP14.7□□□□□ -0.06
USP11-204ENST00000377107 NUP88Q99567 741 aaPredicted RBP14.7□□□□□ -0.06
USP11-204ENST00000377107 SRPRBQ9Y5M8 271 aaKnown RBP14.7□□□□□ -0.06
USP11-204ENST00000377107 INTS13Q9NVM9 706 aa14.7□□□□□ -0.06
USP11-204ENST00000377107 TAB2Q9NYJ8 693 aa14.7□□□□□ -0.06
USP11-204ENST00000377107 SYNRGQ9UMZ2 1314 aa14.69□□□□□ -0.06
USP11-204ENST00000377107 DCCP43146 1447 aa14.69□□□□□ -0.06
USP11-204ENST00000377107 TPM1P09493 284 aa14.69□□□□□ -0.06
USP11-204ENST00000377107 HEATR3Q7Z4Q2 680 aa14.69□□□□□ -0.06
USP11-204ENST00000377107 MINPP1Q9UNW1 487 aa14.69□□□□□ -0.06
USP11-204ENST00000377107 ARHGAP6O43182 974 aa14.69□□□□□ -0.06
USP11-204ENST00000377107 NTSR2O95665 410 aa14.69□□□□□ -0.06
USP11-204ENST00000377107 MECOMQ03112 1051 aa14.69□□□□□ -0.06
USP11-204ENST00000377107 CRNKL1Q9BZJ0 848 aaKnown RBP14.69□□□□□ -0.06
USP11-204ENST00000377107 ARGLU1Q9NWB6 273 aaPredicted RBP14.69□□□□□ -0.06
USP11-204ENST00000377107 BCL9O00512 1426 aa14.69□□□□□ -0.06
USP11-204ENST00000377107 FAM84BQ96KN1 310 aaPredicted RBP14.69□□□□□ -0.06
USP11-204ENST00000377107 NLRP3Q96P20 1036 aa14.69□□□□□ -0.06
USP11-204ENST00000377107 TRERF1Q96PN7 1200 aa14.69□□□□□ -0.06
USP11-204ENST00000377107 KAT14Q9H8E8 782 aa14.69□□□□□ -0.06
USP11-204ENST00000377107 RTL9Q8NET4 1388 aa14.68□□□□□ -0.06
USP11-204ENST00000377107 A0A0U1RQJ8 604 aa14.68□□□□□ -0.06
USP11-204ENST00000377107 HIBADHP31937 336 aaKnown RBP14.68□□□□□ -0.06
USP11-204ENST00000377107 TFAP4Q01664 338 aa14.68□□□□□ -0.06
USP11-204ENST00000377107 DMTNQ08495 405 aa14.68□□□□□ -0.06
USP11-204ENST00000377107 RBL2Q08999 1139 aa14.68□□□□□ -0.06
USP11-204ENST00000377107 KIF4BQ2VIQ3 1234 aa14.68□□□□□ -0.06
USP11-204ENST00000377107 KANK3Q6NY19 840 aa14.68□□□□□ -0.06
USP11-204ENST00000377107 ATRIPQ8WXE1 791 aa14.68□□□□□ -0.06
USP11-204ENST00000377107 PAGE5Q96GU1 130 aa14.68□□□□□ -0.06
USP11-204ENST00000377107 SETDB2Q96T68 719 aa14.68□□□□□ -0.06
USP11-204ENST00000377107 DDX41Q9UJV9 622 aaKnown RBP14.68□□□□□ -0.06
USP11-204ENST00000377107 AKR1B15C9JRZ8 316 aaPredicted RBP14.68□□□□□ -0.06
USP11-204ENST00000377107 TULP1O00294 542 aaPredicted RBP14.68□□□□□ -0.06
USP11-204ENST00000377107 ZPR1O75312 459 aa14.68□□□□□ -0.06
USP11-204ENST00000377107 DIXDC1Q155Q3 683 aa14.68□□□□□ -0.06
USP11-204ENST00000377107 CTR9Q6PD62 1173 aa14.68□□□□□ -0.06
USP11-204ENST00000377107 COL18A1P39060 1754 aa14.68□□□□□ -0.06
USP11-204ENST00000377107 TNS2Q63HR2 1409 aa14.68□□□□□ -0.06
USP11-204ENST00000377107 GNPATO15228 680 aa14.67□□□□□ -0.06
USP11-204ENST00000377107 CD44P16070 742 aaKnown RBP14.67□□□□□ -0.06
USP11-204ENST00000377107 CLCN6P51797 869 aa14.67□□□□□ -0.06
USP11-204ENST00000377107 RPS8P62241 208 aaKnown RBP14.67□□□□□ -0.06
USP11-204ENST00000377107 PTF1AQ7RTS3 328 aa14.67□□□□□ -0.06
USP11-204ENST00000377107 SRBD1Q8N5C6 995 aaKnown RBP14.67□□□□□ -0.06
USP11-204ENST00000377107 SLC44A5Q8NCS7 719 aa14.67□□□□□ -0.06
USP11-204ENST00000377107 RNF26Q9BY78 433 aaPredicted RBP14.67□□□□□ -0.06
USP11-204ENST00000377107 CCDC194A0A1B0GVG4 234 aa14.67□□□□□ -0.06
USP11-204ENST00000377107 PP2D1A8MPX8 630 aa14.67□□□□□ -0.06
USP11-204ENST00000377107 CASP14P31944 242 aa14.67□□□□□ -0.06
USP11-204ENST00000377107 ZNF569Q5MCW4 686 aa14.67□□□□□ -0.06
USP11-204ENST00000377107 ACTN4O43707 911 aaKnown RBP14.67□□□□□ -0.06
USP11-204ENST00000377107 PLCD1P51178 756 aa14.67□□□□□ -0.06
USP11-204ENST00000377107 TBC1D9BQ66K14 1250 aa14.67□□□□□ -0.06
USP11-204ENST00000377107 STK36Q9NRP7 1315 aa14.66□□□□□ -0.06
USP11-204ENST00000377107 TXNRD3Q86VQ6 643 aa14.66□□□□□ -0.06
USP11-204ENST00000377107 USP17L3A6NCW0 530 aa14.66□□□□□ -0.06
USP11-204ENST00000377107 USP17L4A6NCW7 530 aa14.66□□□□□ -0.06
USP11-204ENST00000377107 TFRCP02786 760 aaKnown RBP14.66□□□□□ -0.06
USP11-204ENST00000377107 STAT6P42226 847 aa14.66□□□□□ -0.06
USP11-204ENST00000377107 USP17L1Q7RTZ2 530 aa14.66□□□□□ -0.06
USP11-204ENST00000377107 ANKRD20A12PQ8NF67 263 aa14.66□□□□□ -0.06
USP11-204ENST00000377107 ZNF142P52746 1687 aaPredicted RBP14.66□□□□□ -0.06
USP11-204ENST00000377107 ADAMTS3O15072 1205 aa14.66□□□□□ -0.06
USP11-204ENST00000377107 TXLNAP40222 546 aa14.66□□□□□ -0.06
USP11-204ENST00000377107 PPP2R3AQ06190 1150 aa14.66□□□□□ -0.06
USP11-204ENST00000377107 CUL4BQ13620 913 aa14.66□□□□□ -0.06
USP11-204ENST00000377107 MORC3Q14149 939 aa14.66□□□□□ -0.06
USP11-204ENST00000377107 PKN1Q16512 942 aa14.66□□□□□ -0.06
USP11-204ENST00000377107 MAPKAPK5Q8IW41 473 aa14.66□□□□□ -0.06
USP11-204ENST00000377107 TC2NQ8N9U0 490 aa14.66□□□□□ -0.06
USP11-204ENST00000377107 ENOX1Q8TC92 643 aaKnown RBP14.66□□□□□ -0.06
USP11-204ENST00000377107 GDAQ9Y2T3 454 aa14.66□□□□□ -0.06
USP11-204ENST00000377107 PNPLA7Q6ZV29 1317 aa14.65□□□□□ -0.06
USP11-204ENST00000377107 ADAMTSL3P82987 1691 aa14.65□□□□□ -0.06
USP11-204ENST00000377107 CCDC175P0C221 793 aa14.65□□□□□ -0.06
USP11-204ENST00000377107 ATP2B2Q01814 1243 aa14.65□□□□□ -0.06
USP11-204ENST00000377107 REXO1L1PQ8IX06 675 aa14.65□□□□□ -0.06
USP11-204ENST00000377107 ACRBPQ8NEB7 543 aa14.65□□□□□ -0.06
USP11-204ENST00000377107 SHISA4Q96DD7 197 aa14.65□□□□□ -0.06
USP11-204ENST00000377107 C8orf37Q96NL8 207 aa14.65□□□□□ -0.06
USP11-204ENST00000377107 NOL10Q9BSC4 688 aaKnown RBP14.65□□□□□ -0.06
USP11-204ENST00000377107 ADAMTS7Q9UKP4 1686 aa14.65□□□□□ -0.06
USP11-204ENST00000377107 SLFN14P0C7P3 912 aa14.65□□□□□ -0.06
USP11-204ENST00000377107 MDM2Q00987 491 aaPredicted RBP14.65□□□□□ -0.06
USP11-204ENST00000377107 SEC23AQ15436 765 aa14.65□□□□□ -0.06
USP11-204ENST00000377107 RASGRP2Q7LDG7 609 aa14.65□□□□□ -0.06
USP11-204ENST00000377107 ZNF444Q8N0Y2 327 aaPredicted RBP14.65□□□□□ -0.06
USP11-204ENST00000377107 STAG2Q8N3U4 1231 aa14.65□□□□□ -0.06
USP11-204ENST00000377107 IQUBQ8NA54 791 aa14.65□□□□□ -0.06
USP11-204ENST00000377107 TGFBRAP1Q8WUH2 860 aa14.65□□□□□ -0.06
USP11-204ENST00000377107 RIOK1Q9BRS2 568 aaKnown RBP14.65□□□□□ -0.06
USP11-204ENST00000377107 PRDM4Q9UKN5 801 aa14.65□□□□□ -0.06
USP11-204ENST00000377107 TSPY3P0CV98 308 aa14.65□□□□□ -0.06
USP11-204ENST00000377107 TSPY8P0CW00 308 aa14.65□□□□□ -0.06
USP11-204ENST00000377107 UBA7P41226 1012 aa14.65□□□□□ -0.06
USP11-204ENST00000377107 BMS1Q14692 1282 aaKnown RBP14.65□□□□□ -0.06
USP11-204ENST00000377107 INF2Q27J81 1249 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms