RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 TSPY3P0CV98 308 aa20.59■□□□□ 0.89
CTSA-204ENST00000372484 TSPY8P0CW00 308 aa20.59■□□□□ 0.89
CTSA-204ENST00000372484 ALDH1B1P30837 517 aa20.59■□□□□ 0.89
CTSA-204ENST00000372484 PDE6BP35913 854 aa20.59■□□□□ 0.89
CTSA-204ENST00000372484 SYKP43405 635 aa20.59■□□□□ 0.89
CTSA-204ENST00000372484 ZNF444Q8N0Y2 327 aaPredicted RBP20.59■□□□□ 0.89
CTSA-204ENST00000372484 CLIC6Q96NY7 704 aa20.59■□□□□ 0.89
CTSA-204ENST00000372484 PHF20Q9BVI0 1012 aa20.59■□□□□ 0.89
CTSA-204ENST00000372484 COA1Q9GZY4 146 aa20.59■□□□□ 0.89
CTSA-204ENST00000372484 KIAA1468Q9P260 1216 aa20.59■□□□□ 0.89
CTSA-204ENST00000372484 KIF5BP33176 963 aa20.59■□□□□ 0.89
CTSA-204ENST00000372484 KRI1Q8N9T8 703 aaKnown RBP20.59■□□□□ 0.89
CTSA-204ENST00000372484 SLC44A5Q8NCS7 719 aa20.59■□□□□ 0.89
CTSA-204ENST00000372484 ZC3H12CQ9C0D7 883 aaKnown RBP20.59■□□□□ 0.89
CTSA-204ENST00000372484 CABP5Q9NP86 173 aa20.59■□□□□ 0.89
CTSA-204ENST00000372484 A0A087WWV3 80 aa20.58■□□□□ 0.89
CTSA-204ENST00000372484 KRT2P35908 639 aa20.58■□□□□ 0.89
CTSA-204ENST00000372484 ZRSR1Q15695 479 aaKnown RBP20.58■□□□□ 0.89
CTSA-204ENST00000372484 RESP18Q5W5W9 173 aa20.58■□□□□ 0.89
CTSA-204ENST00000372484 OLFM4Q6UX06 510 aa20.58■□□□□ 0.89
CTSA-204ENST00000372484 ZNF287Q9HBT7 754 aa20.58■□□□□ 0.89
CTSA-204ENST00000372484 HPSEQ9Y251 543 aa20.58■□□□□ 0.89
CTSA-204ENST00000372484 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.58■□□□□ 0.89
CTSA-204ENST00000372484 GOLGA6L19H0YKK7 550 aa20.57■□□□□ 0.88
CTSA-204ENST00000372484 IQCB1Q15051 598 aa20.57■□□□□ 0.88
CTSA-204ENST00000372484 CCDC178Q5BJE1 867 aa20.57■□□□□ 0.88
CTSA-204ENST00000372484 PNMA1Q8ND90 353 aa20.57■□□□□ 0.88
CTSA-204ENST00000372484 FBXW7Q969H0 707 aa20.57■□□□□ 0.88
CTSA-204ENST00000372484 PCDHB6Q9Y5E3 794 aa20.57■□□□□ 0.88
CTSA-204ENST00000372484 GAKO14976 1311 aa20.57■□□□□ 0.88
CTSA-204ENST00000372484 FLT1P17948 1338 aa20.57■□□□□ 0.88
CTSA-204ENST00000372484 USP17L3A6NCW0 530 aa20.57■□□□□ 0.88
CTSA-204ENST00000372484 USP17L4A6NCW7 530 aa20.57■□□□□ 0.88
CTSA-204ENST00000372484 RHBDL3P58872 404 aa20.57■□□□□ 0.88
CTSA-204ENST00000372484 MSL1Q68DK7 614 aa20.57■□□□□ 0.88
CTSA-204ENST00000372484 DPP8Q6V1X1 898 aaPredicted RBP20.57■□□□□ 0.88
CTSA-204ENST00000372484 USP17L1Q7RTZ2 530 aa20.57■□□□□ 0.88
CTSA-204ENST00000372484 ANKS1AQ92625 1134 aa20.57■□□□□ 0.88
CTSA-204ENST00000372484 TIGD1Q96MW7 591 aa20.57■□□□□ 0.88
CTSA-204ENST00000372484 TMX4Q9H1E5 349 aaPredicted RBP20.57■□□□□ 0.88
CTSA-204ENST00000372484 BRMS1Q9HCU9 246 aa20.57■□□□□ 0.88
CTSA-204ENST00000372484 MYH1P12882 1939 aa20.57■□□□□ 0.88
CTSA-204ENST00000372484 FAM237AA0A1B0GTK4 181 aa20.56■□□□□ 0.88
CTSA-204ENST00000372484 ZNF500O60304 480 aaPredicted RBP20.56■□□□□ 0.88
CTSA-204ENST00000372484 ATP2B1P20020 1258 aa20.56■□□□□ 0.88
CTSA-204ENST00000372484 RXRBP28702 533 aa20.56■□□□□ 0.88
CTSA-204ENST00000372484 CEP57L1Q8IYX8 460 aa20.56■□□□□ 0.88
CTSA-204ENST00000372484 MASTLQ96GX5 879 aa20.56■□□□□ 0.88
CTSA-204ENST00000372484 NAT10Q9H0A0 1025 aaKnown RBP20.56■□□□□ 0.88
CTSA-204ENST00000372484 CEP131Q9UPN4 1083 aa20.56■□□□□ 0.88
CTSA-204ENST00000372484 COL11A2P13942 1736 aaPredicted RBP20.56■□□□□ 0.88
CTSA-204ENST00000372484 RASA1P20936 1047 aa20.56■□□□□ 0.88
CTSA-204ENST00000372484 TRIM5Q9C035 493 aa20.56■□□□□ 0.88
CTSA-204ENST00000372484 TCP11L1Q9NUJ3 509 aa20.56■□□□□ 0.88
CTSA-204ENST00000372484 DDX60LQ5H9U9 1706 aaKnown RBP20.55■□□□□ 0.88
CTSA-204ENST00000372484 BECN2A8MW95 431 aa20.55■□□□□ 0.88
CTSA-204ENST00000372484 SCG2P13521 617 aa20.55■□□□□ 0.88
CTSA-204ENST00000372484 C16orf86Q6ZW13 317 aa20.54■□□□□ 0.88
CTSA-204ENST00000372484 SPC24Q8NBT2 197 aa20.54■□□□□ 0.88
CTSA-204ENST00000372484 PIBF1Q8WXW3 757 aa20.54■□□□□ 0.88
CTSA-204ENST00000372484 ZNF830Q96NB3 372 aaPredicted RBP20.54■□□□□ 0.88
CTSA-204ENST00000372484 KCNH3Q9ULD8 1083 aa20.54■□□□□ 0.88
CTSA-204ENST00000372484 STX8Q9UNK0 236 aa20.54■□□□□ 0.88
CTSA-204ENST00000372484 DAGLAQ9Y4D2 1042 aa20.54■□□□□ 0.88
CTSA-204ENST00000372484 PTPREP23469 700 aa20.54■□□□□ 0.88
CTSA-204ENST00000372484 CDK8P49336 464 aa20.54■□□□□ 0.88
CTSA-204ENST00000372484 FBXO2Q9UK22 296 aaPredicted RBP20.54■□□□□ 0.88
CTSA-204ENST00000372484 SUGT1Q9Y2Z0 365 aa20.54■□□□□ 0.88
CTSA-204ENST00000372484 FAM205CA6NFA0 338 aa20.53■□□□□ 0.88
CTSA-204ENST00000372484 GOLGA6L6A8MZA4 724 aa20.53■□□□□ 0.88
CTSA-204ENST00000372484 F8W031 263 aaPredicted RBP20.53■□□□□ 0.88
CTSA-204ENST00000372484 PFKFB3Q16875 520 aaPredicted RBP20.53■□□□□ 0.88
CTSA-204ENST00000372484 DOK7Q18PE1 504 aa20.53■□□□□ 0.88
CTSA-204ENST00000372484 SPECC1Q5M775 1068 aa20.53■□□□□ 0.88
CTSA-204ENST00000372484 ZNF622Q969S3 477 aaKnown RBP eCLIP20.53■□□□□ 0.887e-8■□□□□ 9.1
CTSA-204ENST00000372484 FOCADQ5VW36 1801 aa20.53■□□□□ 0.88
CTSA-204ENST00000372484 TRIM75PA6NK02 468 aa20.53■□□□□ 0.88
CTSA-204ENST00000372484 G3V3G9 751 aa20.53■□□□□ 0.88
CTSA-204ENST00000372484 EARS2Q5JPH6 523 aaKnown RBP20.53■□□□□ 0.88
CTSA-204ENST00000372484 DCAF8Q5TAQ9 597 aa20.53■□□□□ 0.88
CTSA-204ENST00000372484 DHX40Q8IX18 779 aaKnown RBP20.53■□□□□ 0.88
CTSA-204ENST00000372484 EYA3Q99504 573 aa20.53■□□□□ 0.88
CTSA-204ENST00000372484 TTC12Q9H892 705 aaPredicted RBP20.53■□□□□ 0.88
CTSA-204ENST00000372484 BIN1O00499 593 aa20.52■□□□□ 0.88
CTSA-204ENST00000372484 ZNF75DP51815 510 aa20.52■□□□□ 0.88
CTSA-204ENST00000372484 GRM4Q14833 912 aa20.52■□□□□ 0.88
CTSA-204ENST00000372484 NPY5RQ15761 445 aa20.52■□□□□ 0.88
CTSA-204ENST00000372484 DPCR1Q3MIW9 517 aa20.52■□□□□ 0.88
CTSA-204ENST00000372484 PLA2G4DQ86XP0 818 aa20.52■□□□□ 0.88
CTSA-204ENST00000372484 STAG2Q8N3U4 1231 aa20.52■□□□□ 0.88
CTSA-204ENST00000372484 FAM13BQ9NYF5 915 aa20.52■□□□□ 0.88
CTSA-204ENST00000372484 GNAQP50148 359 aa20.51■□□□□ 0.87
CTSA-204ENST00000372484 NLRP5P59047 1200 aa20.51■□□□□ 0.87
CTSA-204ENST00000372484 GRIN1Q05586 938 aa20.51■□□□□ 0.87
CTSA-204ENST00000372484 CERS5Q8N5B7 392 aa20.51■□□□□ 0.87
CTSA-204ENST00000372484 TMEM47Q9BQJ4 181 aa20.51■□□□□ 0.87
CTSA-204ENST00000372484 TTF2Q9UNY4 1162 aaKnown RBP20.51■□□□□ 0.87
CTSA-204ENST00000372484 SRPRBQ9Y5M8 271 aaKnown RBP20.51■□□□□ 0.87
CTSA-204ENST00000372484 TNS1Q9HBL0 1735 aaKnown RBP20.51■□□□□ 0.87
CTSA-204ENST00000372484 KIAA2012Q0VF49 1180 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms