RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 AXIN2Q9Y2T1 843 aa10.92□□□□□ -0.66
LRRC40-201ENST00000370952 REXO2Q9Y3B8 237 aaKnown RBP10.92□□□□□ -0.66
LRRC40-201ENST00000370952 SAMM50Q9Y512 469 aa10.92□□□□□ -0.66
LRRC40-201ENST00000370952 MYO5AQ9Y4I1 1855 aaKnown RBP10.92□□□□□ -0.66
LRRC40-201ENST00000370952 A1BGP04217 495 aa10.91□□□□□ -0.66
LRRC40-201ENST00000370952 IRAK1P51617 712 aa10.91□□□□□ -0.66
LRRC40-201ENST00000370952 MRPS25P82663 173 aaKnown RBP10.91□□□□□ -0.66
LRRC40-201ENST00000370952 KRT31Q15323 416 aa10.91□□□□□ -0.66
LRRC40-201ENST00000370952 TMEM67Q5HYA8 995 aa10.91□□□□□ -0.66
LRRC40-201ENST00000370952 TRAPPC11Q7Z392 1133 aa10.91□□□□□ -0.66
LRRC40-201ENST00000370952 TEX2Q8IWB9 1127 aa10.91□□□□□ -0.66
LRRC40-201ENST00000370952 FAM76AQ8TAV0 307 aa10.91□□□□□ -0.66
LRRC40-201ENST00000370952 OXER1Q8TDS5 423 aa10.91□□□□□ -0.66
LRRC40-201ENST00000370952 CEP126Q9P2H0 1117 aa10.91□□□□□ -0.66
LRRC40-201ENST00000370952 USP54Q70EL1 1684 aa10.91□□□□□ -0.66
LRRC40-201ENST00000370952 GOLGA6CA6NDK9 693 aa10.91□□□□□ -0.66
LRRC40-201ENST00000370952 FAM205CA6NFA0 338 aa10.91□□□□□ -0.66
LRRC40-201ENST00000370952 EBAG9O00559 213 aa10.91□□□□□ -0.66
LRRC40-201ENST00000370952 TUBBP07437 444 aa10.91□□□□□ -0.66
LRRC40-201ENST00000370952 GOLGA6DP0CG33 693 aa10.91□□□□□ -0.66
LRRC40-201ENST00000370952 SAFBQ15424 915 aaKnown RBP eCLIP10.91□□□□□ -0.66
LRRC40-201ENST00000370952 CYP26C1Q6V0L0 522 aa10.91□□□□□ -0.66
LRRC40-201ENST00000370952 ELOA2Q8IYF1 753 aaPredicted RBP10.91□□□□□ -0.66
LRRC40-201ENST00000370952 BCAS4Q8TDM0 211 aa10.91□□□□□ -0.66
LRRC40-201ENST00000370952 SELENOOQ9BVL4 669 aa10.91□□□□□ -0.66
LRRC40-201ENST00000370952 GOLGA6AQ9NYA3 693 aa10.91□□□□□ -0.66
LRRC40-201ENST00000370952 H7C1W4 665 aa10.91□□□□□ -0.66
LRRC40-201ENST00000370952 ZNF185O15231 689 aa10.91□□□□□ -0.66
LRRC40-201ENST00000370952 MMP1P03956 469 aa10.91□□□□□ -0.66
LRRC40-201ENST00000370952 HNRNPH1P31943 449 aaKnown RBP10.91□□□□□ -0.66
LRRC40-201ENST00000370952 MAP9Q49MG5 647 aa10.91□□□□□ -0.66
LRRC40-201ENST00000370952 KCNV1Q6PIU1 500 aa10.91□□□□□ -0.66
LRRC40-201ENST00000370952 SPATA20Q8TB22 786 aa10.91□□□□□ -0.66
LRRC40-201ENST00000370952 CABP5Q9NP86 173 aa10.91□□□□□ -0.66
LRRC40-201ENST00000370952 TBX22Q9Y458 520 aa10.91□□□□□ -0.66
LRRC40-201ENST00000370952 PPP1R3GB7ZBB8 358 aa10.9□□□□□ -0.66
LRRC40-201ENST00000370952 ZFYP08048 801 aaPredicted RBP10.9□□□□□ -0.66
LRRC40-201ENST00000370952 SNRPA1P09661 255 aaKnown RBP10.9□□□□□ -0.66
LRRC40-201ENST00000370952 TTLL7Q6ZT98 887 aa10.9□□□□□ -0.66
LRRC40-201ENST00000370952 TTC5Q8N0Z6 440 aa10.9□□□□□ -0.66
LRRC40-201ENST00000370952 KCNH5Q8NCM2 988 aa10.9□□□□□ -0.66
LRRC40-201ENST00000370952 SECISBP2LQ93073 1101 aaKnown RBP10.9□□□□□ -0.66
LRRC40-201ENST00000370952 CCDC51Q96ER9 411 aa10.9□□□□□ -0.66
LRRC40-201ENST00000370952 CTAGE1Q96RT6 745 aa10.9□□□□□ -0.66
LRRC40-201ENST00000370952 ZKSCAN3Q9BRR0 538 aa10.9□□□□□ -0.66
LRRC40-201ENST00000370952 BLZF1Q9H2G9 400 aa10.9□□□□□ -0.66
LRRC40-201ENST00000370952 LY9Q9HBG7 655 aa10.9□□□□□ -0.66
LRRC40-201ENST00000370952 POLD4Q9HCU8 107 aa10.9□□□□□ -0.66
LRRC40-201ENST00000370952 SRPRBQ9Y5M8 271 aaKnown RBP10.9□□□□□ -0.66
LRRC40-201ENST00000370952 SAR1BQ9Y6B6 198 aa10.9□□□□□ -0.66
LRRC40-201ENST00000370952 EPN1Q9Y6I3 576 aaPredicted RBP10.9□□□□□ -0.66
LRRC40-201ENST00000370952 MYH7P12883 1935 aa10.9□□□□□ -0.66
LRRC40-201ENST00000370952 NDUFA10O95299 355 aa10.9□□□□□ -0.67
LRRC40-201ENST00000370952 GCP02774 474 aa10.9□□□□□ -0.67
LRRC40-201ENST00000370952 FKBP15Q5T1M5 1219 aa10.9□□□□□ -0.67
LRRC40-201ENST00000370952 KANK3Q6NY19 840 aa10.9□□□□□ -0.67
LRRC40-201ENST00000370952 CCDC91Q7Z6B0 441 aa10.9□□□□□ -0.67
LRRC40-201ENST00000370952 CAGE1Q8TC20 777 aa10.9□□□□□ -0.67
LRRC40-201ENST00000370952 IGDCC4Q8TDY8 1250 aa10.9□□□□□ -0.67
LRRC40-201ENST00000370952 PAGE5Q96GU1 130 aa10.9□□□□□ -0.67
LRRC40-201ENST00000370952 MYO1AQ9UBC5 1043 aa10.9□□□□□ -0.67
LRRC40-201ENST00000370952 MAPK8IP1Q9UQF2 711 aa10.9□□□□□ -0.67
LRRC40-201ENST00000370952 KDM6AO15550 1401 aaPredicted RBP10.89□□□□□ -0.67
LRRC40-201ENST00000370952 FECHP22830 423 aa10.89□□□□□ -0.67
LRRC40-201ENST00000370952 GNGT1P63211 74 aa10.89□□□□□ -0.67
LRRC40-201ENST00000370952 C2orf54Q08AI8 447 aa10.89□□□□□ -0.67
LRRC40-201ENST00000370952 RILPL1Q5EBL4 403 aa10.89□□□□□ -0.67
LRRC40-201ENST00000370952 ESCO1Q5FWF5 840 aa10.89□□□□□ -0.67
LRRC40-201ENST00000370952 CCDC122Q5T0U0 273 aa10.89□□□□□ -0.67
LRRC40-201ENST00000370952 PLBD2Q8NHP8 589 aa10.89□□□□□ -0.67
LRRC40-201ENST00000370952 ZBTB3Q9H5J0 574 aa10.89□□□□□ -0.67
LRRC40-201ENST00000370952 GNL3LQ9NVN8 582 aaKnown RBP10.89□□□□□ -0.67
LRRC40-201ENST00000370952 SLC12A7Q9Y666 1083 aa10.89□□□□□ -0.67
LRRC40-201ENST00000370952 MYH10P35580 1976 aa10.89□□□□□ -0.67
LRRC40-201ENST00000370952 WDR19Q8NEZ3 1342 aa10.89□□□□□ -0.67
LRRC40-201ENST00000370952 MYH13Q9UKX3 1938 aa10.89□□□□□ -0.67
LRRC40-201ENST00000370952 GOLGA6BA6NDN3 693 aa10.89□□□□□ -0.67
LRRC40-201ENST00000370952 PDE2AO00408 941 aaPredicted RBP10.89□□□□□ -0.67
LRRC40-201ENST00000370952 PES1O00541 588 aaKnown RBP10.89□□□□□ -0.67
LRRC40-201ENST00000370952 IFIT3O14879 490 aaKnown RBP10.89□□□□□ -0.67
LRRC40-201ENST00000370952 SHOX2O60902 331 aaPredicted RBP10.89□□□□□ -0.67
LRRC40-201ENST00000370952 COPB1P53618 953 aaKnown RBP10.89□□□□□ -0.67
LRRC40-201ENST00000370952 CTDSPL2Q05D32 466 aa10.89□□□□□ -0.67
LRRC40-201ENST00000370952 SWT1Q5T5J6 900 aaKnown RBP10.89□□□□□ -0.67
LRRC40-201ENST00000370952 RRP36Q96EU6 259 aaKnown RBP10.89□□□□□ -0.67
LRRC40-201ENST00000370952 CAPS2Q9BXY5 557 aa10.89□□□□□ -0.67
LRRC40-201ENST00000370952 CXorf56Q9H5V9 222 aa10.89□□□□□ -0.67
LRRC40-201ENST00000370952 CWC25Q9NXE8 425 aaPredicted RBP10.89□□□□□ -0.67
LRRC40-201ENST00000370952 SPEF2Q9C093 1822 aa10.88□□□□□ -0.67
LRRC40-201ENST00000370952 FMNL1O95466 1100 aaPredicted RBP10.88□□□□□ -0.67
LRRC40-201ENST00000370952 EZH2Q15910 746 aaKnown RBP10.88□□□□□ -0.67
LRRC40-201ENST00000370952 RRP12Q5JTH9 1297 aaKnown RBP10.88□□□□□ -0.67
LRRC40-201ENST00000370952 SND1Q7KZF4 910 aaKnown RBP eCLIP10.88□□□□□ -0.67
LRRC40-201ENST00000370952 CEP89Q96ST8 783 aa10.88□□□□□ -0.67
LRRC40-201ENST00000370952 STRN4Q9NRL3 753 aa10.88□□□□□ -0.67
LRRC40-201ENST00000370952 MAP3K15Q6ZN16 1313 aa10.88□□□□□ -0.67
LRRC40-201ENST00000370952 IDH1O75874 414 aaKnown RBP10.88□□□□□ -0.67
LRRC40-201ENST00000370952 INPP5BP32019 993 aa10.88□□□□□ -0.67
LRRC40-201ENST00000370952 HERVK_113P62684 666 aa10.88□□□□□ -0.67
LRRC40-201ENST00000370952 RRAGBQ5VZM2 374 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms