RNA–Protein interactions for RNA: ENST00000369128.9

VPS45-201, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2 BASIC

Gene VPS45, Length 2,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-201ENST00000369128 SSRP1Q08945 709 aaKnown RBP10.5□□□□□ -0.73
VPS45-201ENST00000369128 TMTC3Q6ZXV5 915 aa10.5□□□□□ -0.73
VPS45-201ENST00000369128 DGKHQ86XP1 1220 aa10.5□□□□□ -0.73
VPS45-201ENST00000369128 PNMA1Q8ND90 353 aa10.5□□□□□ -0.73
VPS45-201ENST00000369128 LEO1Q8WVC0 666 aaPredicted RBP10.5□□□□□ -0.73
VPS45-201ENST00000369128 ANKS1AQ92625 1134 aa10.5□□□□□ -0.73
VPS45-201ENST00000369128 CEP95Q96GE4 821 aa10.5□□□□□ -0.73
VPS45-201ENST00000369128 USP28Q96RU2 1077 aa10.5□□□□□ -0.73
VPS45-201ENST00000369128 IDI2Q9BXS1 227 aa10.5□□□□□ -0.73
VPS45-201ENST00000369128 TCP11L1Q9NUJ3 509 aa10.5□□□□□ -0.73
VPS45-201ENST00000369128 SERPINB13Q9UIV8 391 aa10.5□□□□□ -0.73
VPS45-201ENST00000369128 ZNRF3Q9ULT6 936 aa10.5□□□□□ -0.73
VPS45-201ENST00000369128 STX8Q9UNK0 236 aa10.5□□□□□ -0.73
VPS45-201ENST00000369128 BCS1LQ9Y276 419 aa10.5□□□□□ -0.73
VPS45-201ENST00000369128 ELP1O95163 1332 aa10.49□□□□□ -0.73
VPS45-201ENST00000369128 CCDC196A0A1B0GTZ2 297 aa10.49□□□□□ -0.73
VPS45-201ENST00000369128 MBD3O95983 291 aa10.49□□□□□ -0.73
VPS45-201ENST00000369128 AKR1B1P15121 316 aa10.49□□□□□ -0.73
VPS45-201ENST00000369128 NT5C2P49902 561 aa10.49□□□□□ -0.73
VPS45-201ENST00000369128 UBE2HP62256 183 aa10.49□□□□□ -0.73
VPS45-201ENST00000369128 RASSF7Q02833 373 aa10.49□□□□□ -0.73
VPS45-201ENST00000369128 CEBPZQ03701 1054 aaKnown RBP10.49□□□□□ -0.73
VPS45-201ENST00000369128 PKN1Q16512 942 aa10.49□□□□□ -0.73
VPS45-201ENST00000369128 SHROOM1Q2M3G4 852 aaPredicted RBP10.49□□□□□ -0.73
VPS45-201ENST00000369128 SLC35G1Q2M3R5 365 aa10.49□□□□□ -0.73
VPS45-201ENST00000369128 NIM1KQ8IY84 436 aa10.49□□□□□ -0.73
VPS45-201ENST00000369128 SRBD1Q8N5C6 995 aaKnown RBP10.49□□□□□ -0.73
VPS45-201ENST00000369128 NEDD1Q8NHV4 660 aa10.49□□□□□ -0.73
VPS45-201ENST00000369128 TMEM47Q9BQJ4 181 aa10.49□□□□□ -0.73
VPS45-201ENST00000369128 MYO3BQ8WXR4 1341 aa10.49□□□□□ -0.73
VPS45-201ENST00000369128 SHTN1A0MZ66 631 aa10.49□□□□□ -0.73
VPS45-201ENST00000369128 SPDYE2BA6NHP3 402 aa10.49□□□□□ -0.73
VPS45-201ENST00000369128 SPDYE6P0CI01 402 aa10.49□□□□□ -0.73
VPS45-201ENST00000369128 CALM1P0DP23 149 aa10.49□□□□□ -0.73
VPS45-201ENST00000369128 CALM2P0DP24 149 aa10.49□□□□□ -0.73
VPS45-201ENST00000369128 CALM3P0DP25 149 aa10.49□□□□□ -0.73
VPS45-201ENST00000369128 CXCL9Q07325 125 aa10.49□□□□□ -0.73
VPS45-201ENST00000369128 ZSCAN23Q3MJ62 389 aa10.49□□□□□ -0.73
VPS45-201ENST00000369128 GAS2L3Q86XJ1 694 aa10.49□□□□□ -0.73
VPS45-201ENST00000369128 STAG2Q8N3U4 1231 aa10.49□□□□□ -0.73
VPS45-201ENST00000369128 SPATA32Q96LK8 384 aa10.49□□□□□ -0.73
VPS45-201ENST00000369128 RNF26Q9BY78 433 aaPredicted RBP10.49□□□□□ -0.73
VPS45-201ENST00000369128 KAT14Q9H8E8 782 aa10.49□□□□□ -0.73
VPS45-201ENST00000369128 ZNF287Q9HBT7 754 aa10.49□□□□□ -0.73
VPS45-201ENST00000369128 KCNJ14Q9UNX9 436 aa10.49□□□□□ -0.73
VPS45-201ENST00000369128 DEXIO95424 95 aa10.48□□□□□ -0.73
VPS45-201ENST00000369128 VEGFAP15692 232 aaPredicted RBP10.48□□□□□ -0.73
VPS45-201ENST00000369128 NOVP48745 357 aa10.48□□□□□ -0.73
VPS45-201ENST00000369128 PPP2R5BQ15173 497 aa10.48□□□□□ -0.73
VPS45-201ENST00000369128 TRIM22Q8IYM9 498 aa10.48□□□□□ -0.73
VPS45-201ENST00000369128 CTCFLQ8NI51 663 aaPredicted RBP10.48□□□□□ -0.73
VPS45-201ENST00000369128 PGBD1Q96JS3 809 aa10.48□□□□□ -0.73
VPS45-201ENST00000369128 VPS33BQ9H267 617 aa10.48□□□□□ -0.73
VPS45-201ENST00000369128 RBM28Q9NW13 759 aaKnown RBP10.48□□□□□ -0.73
VPS45-201ENST00000369128 MTMR7Q9Y216 660 aa10.48□□□□□ -0.73
VPS45-201ENST00000369128 IGKV6D-41A0A0C4DH26 115 aa10.48□□□□□ -0.73
VPS45-201ENST00000369128 FSD2A1L4K1 749 aa10.48□□□□□ -0.73
VPS45-201ENST00000369128 MYSM1Q5VVJ2 828 aa10.48□□□□□ -0.73
VPS45-201ENST00000369128 SCAND2PQ9GZW5 306 aaPredicted RBP10.48□□□□□ -0.73
VPS45-201ENST00000369128 EHD4Q9H223 541 aa10.48□□□□□ -0.73
VPS45-201ENST00000369128 MAD2L2Q9UI95 211 aa10.48□□□□□ -0.73
VPS45-201ENST00000369128 ATRNL1Q5VV63 1379 aa10.47□□□□□ -0.73
VPS45-201ENST00000369128 CLRN2A0PK11 232 aa10.47□□□□□ -0.73
VPS45-201ENST00000369128 MMP1P03956 469 aa10.47□□□□□ -0.73
VPS45-201ENST00000369128 EIF6P56537 245 aaKnown RBP10.47□□□□□ -0.73
VPS45-201ENST00000369128 GRM4Q14833 912 aa10.47□□□□□ -0.73
VPS45-201ENST00000369128 VPS54Q9P1Q0 977 aa10.47□□□□□ -0.73
VPS45-201ENST00000369128 V9GY48 417 aaPredicted RBP10.47□□□□□ -0.73
VPS45-201ENST00000369128 DICER1Q9UPY3 1922 aaKnown RBP10.46□□□□□ -0.73
VPS45-201ENST00000369128 PRPF3O43395 683 aaKnown RBP10.46□□□□□ -0.73
VPS45-201ENST00000369128 CYTH3O43739 400 aa10.46□□□□□ -0.73
VPS45-201ENST00000369128 NPM3O75607 178 aaKnown RBP10.46□□□□□ -0.73
VPS45-201ENST00000369128 HLA-DOAP06340 250 aa10.46□□□□□ -0.73
VPS45-201ENST00000369128 U2AF2P26368 475 aaKnown RBP eCLIP10.46□□□□□ -0.732e-6■□□□□ 10.1
VPS45-201ENST00000369128 CDAN1Q8IWY9 1227 aa10.46□□□□□ -0.73
VPS45-201ENST00000369128 RGS22Q8NE09 1264 aa10.46□□□□□ -0.73
VPS45-201ENST00000369128 CPVLQ9H3G5 476 aa10.46□□□□□ -0.73
VPS45-201ENST00000369128 MTMR4Q9NYA4 1195 aa10.46□□□□□ -0.73
VPS45-201ENST00000369128 SWAP70Q9UH65 585 aa10.46□□□□□ -0.73
VPS45-201ENST00000369128 SBF1O95248 1867 aa10.46□□□□□ -0.73
VPS45-201ENST00000369128 COL2A1P02458 1487 aaPredicted RBP10.46□□□□□ -0.73
VPS45-201ENST00000369128 BTBD18B2RXH4 712 aa10.46□□□□□ -0.74
VPS45-201ENST00000369128 EGFRP00533 1210 aa10.46□□□□□ -0.74
VPS45-201ENST00000369128 GOLGA8HP0CJ92 632 aa10.46□□□□□ -0.74
VPS45-201ENST00000369128 LIG1P18858 919 aa10.46□□□□□ -0.74
VPS45-201ENST00000369128 NR5A1Q13285 461 aa10.46□□□□□ -0.74
VPS45-201ENST00000369128 NPY5RQ15761 445 aa10.46□□□□□ -0.74
VPS45-201ENST00000369128 CSPP1Q1MSJ5 1256 aa10.46□□□□□ -0.74
VPS45-201ENST00000369128 BRAPQ7Z569 592 aa10.46□□□□□ -0.74
VPS45-201ENST00000369128 DIS3L2Q8IYB7 885 aaKnown RBP10.46□□□□□ -0.74
VPS45-201ENST00000369128 LRRC47Q8N1G4 583 aaKnown RBP10.46□□□□□ -0.74
VPS45-201ENST00000369128 OXER1Q8TDS5 423 aa10.46□□□□□ -0.74
VPS45-201ENST00000369128 PIBF1Q8WXW3 757 aa10.46□□□□□ -0.74
VPS45-201ENST00000369128 WASF1Q92558 559 aa10.46□□□□□ -0.74
VPS45-201ENST00000369128 CLIC4Q9Y696 253 aa10.46□□□□□ -0.74
VPS45-201ENST00000369128 CNTNAP1P78357 1384 aa10.46□□□□□ -0.74
VPS45-201ENST00000369128 LTBP3Q9NS15 1303 aa10.45□□□□□ -0.74
VPS45-201ENST00000369128 SYCE3A1L190 88 aa10.45□□□□□ -0.74
VPS45-201ENST00000369128 PALM3A6NDB9 673 aaPredicted RBP10.45□□□□□ -0.74
VPS45-201ENST00000369128 TRIM29Q14134 588 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms