RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 SPDYE6P0CI01 402 aa14.08□□□□□ -0.16
USF1-203ENST00000368021 CDK8P49336 464 aa14.08□□□□□ -0.16
USF1-203ENST00000368021 GABPAQ06546 454 aa14.08□□□□□ -0.16
USF1-203ENST00000368021 NFIAQ12857 509 aa14.08□□□□□ -0.16
USF1-203ENST00000368021 PPP2R5BQ15173 497 aa14.08□□□□□ -0.16
USF1-203ENST00000368021 SLC4A8Q2Y0W8 1093 aa14.08□□□□□ -0.16
USF1-203ENST00000368021 PRAMEF18Q5VWM3 479 aa14.08□□□□□ -0.16
USF1-203ENST00000368021 LARP1BQ659C4 914 aaKnown RBP14.08□□□□□ -0.16
USF1-203ENST00000368021 MTERF4Q7Z6M4 381 aaKnown RBP14.08□□□□□ -0.16
USF1-203ENST00000368021 SULF1Q8IWU6 871 aa14.08□□□□□ -0.16
USF1-203ENST00000368021 ZNF444Q8N0Y2 327 aaPredicted RBP14.08□□□□□ -0.16
USF1-203ENST00000368021 POLR2AP24928 1970 aaKnown RBP14.08□□□□□ -0.16
USF1-203ENST00000368021 COL2A1P02458 1487 aaPredicted RBP14.07□□□□□ -0.16
USF1-203ENST00000368021 PASKQ96RG2 1323 aa14.07□□□□□ -0.16
USF1-203ENST00000368021 CPLX1O14810 134 aa14.07□□□□□ -0.16
USF1-203ENST00000368021 CDKL5O76039 1030 aa14.07□□□□□ -0.16
USF1-203ENST00000368021 HLA-DOAP06340 250 aa14.07□□□□□ -0.16
USF1-203ENST00000368021 RASA1P20936 1047 aa14.07□□□□□ -0.16
USF1-203ENST00000368021 MCM4P33991 863 aa14.07□□□□□ -0.16
USF1-203ENST00000368021 APLP1P51693 650 aa14.07□□□□□ -0.16
USF1-203ENST00000368021 IFIT1BQ5T764 474 aaKnown RBP14.07□□□□□ -0.16
USF1-203ENST00000368021 MICU3Q86XE3 530 aa14.07□□□□□ -0.16
USF1-203ENST00000368021 EHD4Q9H223 541 aa14.07□□□□□ -0.16
USF1-203ENST00000368021 SWAP70Q9UH65 585 aa14.07□□□□□ -0.16
USF1-203ENST00000368021 ENTPD3O75355 529 aa14.06□□□□□ -0.16
USF1-203ENST00000368021 ZSCAN22P10073 491 aaPredicted RBP14.06□□□□□ -0.16
USF1-203ENST00000368021 RBM10P98175 930 aaKnown RBP14.06□□□□□ -0.16
USF1-203ENST00000368021 TFAP4Q01664 338 aa14.06□□□□□ -0.16
USF1-203ENST00000368021 FAM47AQ5JRC9 791 aa14.06□□□□□ -0.16
USF1-203ENST00000368021 CPLX2Q6PUV4 134 aaKnown RBP14.06□□□□□ -0.16
USF1-203ENST00000368021 DGKHQ86XP1 1220 aa14.06□□□□□ -0.16
USF1-203ENST00000368021 ZNF654Q8IZM8 581 aa14.06□□□□□ -0.16
USF1-203ENST00000368021 FAM184AQ8NB25 1140 aa14.06□□□□□ -0.16
USF1-203ENST00000368021 ANKS1AQ92625 1134 aa14.06□□□□□ -0.16
USF1-203ENST00000368021 TDRD3Q9H7E2 651 aaKnown RBP14.06□□□□□ -0.16
USF1-203ENST00000368021 VEZTQ9HBM0 779 aa14.06□□□□□ -0.16
USF1-203ENST00000368021 FAM198AQ9UFP1 575 aa14.06□□□□□ -0.16
USF1-203ENST00000368021 SERPINB13Q9UIV8 391 aa14.06□□□□□ -0.16
USF1-203ENST00000368021 MTMR6Q9Y217 621 aa14.06□□□□□ -0.16
USF1-203ENST00000368021 CCDC196A0A1B0GTZ2 297 aa14.06□□□□□ -0.16
USF1-203ENST00000368021 GOLGA8AA7E2F4 631 aa14.06□□□□□ -0.16
USF1-203ENST00000368021 MYO1BO43795 1136 aa14.06□□□□□ -0.16
USF1-203ENST00000368021 BAG4O95429 457 aaKnown RBP14.06□□□□□ -0.16
USF1-203ENST00000368021 TSPY3P0CV98 308 aa14.06□□□□□ -0.16
USF1-203ENST00000368021 TSPY8P0CW00 308 aa14.06□□□□□ -0.16
USF1-203ENST00000368021 CALM1P0DP23 149 aa14.06□□□□□ -0.16
USF1-203ENST00000368021 CALM2P0DP24 149 aa14.06□□□□□ -0.16
USF1-203ENST00000368021 CALM3P0DP25 149 aa14.06□□□□□ -0.16
USF1-203ENST00000368021 SLC44A5Q8NCS7 719 aa14.06□□□□□ -0.16
USF1-203ENST00000368021 RGS22Q8NE09 1264 aa14.06□□□□□ -0.16
USF1-203ENST00000368021 ZBED3Q96IU2 234 aaPredicted RBP14.06□□□□□ -0.16
USF1-203ENST00000368021 ATRNL1Q5VV63 1379 aa14.05□□□□□ -0.16
USF1-203ENST00000368021 PLIN4Q96Q06 1357 aa14.05□□□□□ -0.16
USF1-203ENST00000368021 DDX11L8A8MPP1 907 aa14.05□□□□□ -0.16
USF1-203ENST00000368021 DDAH1O94760 285 aa14.05□□□□□ -0.16
USF1-203ENST00000368021 CELF2O95319 508 aaKnown RBP14.05□□□□□ -0.16
USF1-203ENST00000368021 NTRK3Q16288 839 aa14.05□□□□□ -0.16
USF1-203ENST00000368021 FKBP1CQ5VVH2 108 aa14.05□□□□□ -0.16
USF1-203ENST00000368021 CATIPQ7Z7H3 387 aa14.05□□□□□ -0.16
USF1-203ENST00000368021 NEDD1Q8NHV4 660 aa14.05□□□□□ -0.16
USF1-203ENST00000368021 NAP1L5Q96NT1 182 aaPredicted RBP14.05□□□□□ -0.16
USF1-203ENST00000368021 FAM217BQ9NTX9 383 aaPredicted RBP14.05□□□□□ -0.16
USF1-203ENST00000368021 TMOD2Q9NZR1 351 aa14.05□□□□□ -0.16
USF1-203ENST00000368021 ATP6V1DQ9Y5K8 247 aa14.05□□□□□ -0.16
USF1-203ENST00000368021 F13A1P00488 732 aa14.04□□□□□ -0.16
USF1-203ENST00000368021 CDC27P30260 824 aa14.04□□□□□ -0.16
USF1-203ENST00000368021 ADD1P35611 737 aaKnown RBP14.04□□□□□ -0.16
USF1-203ENST00000368021 TERF1P54274 439 aa14.04□□□□□ -0.16
USF1-203ENST00000368021 CACNB3P54284 484 aa14.04□□□□□ -0.16
USF1-203ENST00000368021 TROAPQ12815 778 aa14.04□□□□□ -0.16
USF1-203ENST00000368021 CST9Q5W186 159 aa14.04□□□□□ -0.16
USF1-203ENST00000368021 RCSD1Q6JBY9 416 aa14.04□□□□□ -0.16
USF1-203ENST00000368021 FANCBQ8NB91 859 aa14.04□□□□□ -0.16
USF1-203ENST00000368021 DDX11Q96FC9 970 aa14.04□□□□□ -0.16
USF1-203ENST00000368021 MYL10Q9BUA6 226 aa14.04□□□□□ -0.16
USF1-203ENST00000368021 IL17RBQ9NRM6 502 aa14.04□□□□□ -0.16
USF1-203ENST00000368021 PI4KBQ9UBF8 816 aa14.04□□□□□ -0.16
USF1-203ENST00000368021 MYH8P13535 1937 aa14.04□□□□□ -0.16
USF1-203ENST00000368021 GOLGA6L22H0YM25 854 aa14.04□□□□□ -0.16
USF1-203ENST00000368021 NMT2O60551 498 aa14.04□□□□□ -0.16
USF1-203ENST00000368021 FDPSP14324 419 aaKnown RBP14.04□□□□□ -0.16
USF1-203ENST00000368021 IFNAR1P17181 557 aa14.04□□□□□ -0.16
USF1-203ENST00000368021 RXRAP19793 462 aa14.04□□□□□ -0.16
USF1-203ENST00000368021 PTMSP20962 102 aa14.04□□□□□ -0.16
USF1-203ENST00000368021 RTN1Q16799 776 aa14.04□□□□□ -0.16
USF1-203ENST00000368021 SPDYE2Q495Y8 402 aa14.04□□□□□ -0.16
USF1-203ENST00000368021 RAB11FIP4Q86YS3 637 aa14.04□□□□□ -0.16
USF1-203ENST00000368021 STK36Q9NRP7 1315 aa14.03□□□□□ -0.16
USF1-203ENST00000368021 VPS37CA5D8V6 355 aaPredicted RBP14.03□□□□□ -0.16
USF1-203ENST00000368021 TMEM88BA6NKF7 163 aa14.03□□□□□ -0.16
USF1-203ENST00000368021 TCP10L2B9ZVM9 353 aa14.03□□□□□ -0.16
USF1-203ENST00000368021 DTNBO60941 627 aa14.03□□□□□ -0.16
USF1-203ENST00000368021 NOVP48745 357 aa14.03□□□□□ -0.16
USF1-203ENST00000368021 METTL16Q86W50 562 aaKnown RBP14.03□□□□□ -0.16
USF1-203ENST00000368021 ZFPM1Q8IX07 1006 aa14.03□□□□□ -0.16
USF1-203ENST00000368021 MAP3K14Q99558 947 aa14.03□□□□□ -0.16
USF1-203ENST00000368021 RBM28Q9NW13 759 aaKnown RBP14.03□□□□□ -0.16
USF1-203ENST00000368021 SIPA1L1O43166 1804 aa14.02□□□□□ -0.16
USF1-203ENST00000368021 TCP10Q12799 353 aa14.02□□□□□ -0.16
USF1-203ENST00000368021 FOXP4Q8IVH2 680 aaPredicted RBP14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms