RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 NKG7Q16617 165 aa8.24□□□□□ -1.09
RNU4-39P-201ENST00000362455 ANKRD34AQ69YU3 496 aa8.24□□□□□ -1.09
RNU4-39P-201ENST00000362455 C6orf15Q6UXA7 325 aaPredicted RBP8.24□□□□□ -1.09
RNU4-39P-201ENST00000362455 MRPL41Q8IXM3 137 aaKnown RBP8.24□□□□□ -1.09
RNU4-39P-201ENST00000362455 TMEM130Q8N3G9 435 aa8.24□□□□□ -1.09
RNU4-39P-201ENST00000362455 C2CD4AQ8NCU7 369 aaPredicted RBP8.24□□□□□ -1.09
RNU4-39P-201ENST00000362455 GSX1Q9H4S2 264 aaPredicted RBP8.24□□□□□ -1.09
RNU4-39P-201ENST00000362455 PIDD1Q9HB75 910 aa8.24□□□□□ -1.09
RNU4-39P-201ENST00000362455 ACTL7BQ9Y614 415 aa8.24□□□□□ -1.09
RNU4-39P-201ENST00000362455 SLC12A7Q9Y666 1083 aa8.24□□□□□ -1.09
RNU4-39P-201ENST00000362455 ABCA5Q8WWZ7 1642 aa8.24□□□□□ -1.09
RNU4-39P-201ENST00000362455 LTBP3Q9NS15 1303 aa8.24□□□□□ -1.09
RNU4-39P-201ENST00000362455 PDPK1O15530 556 aa8.23□□□□□ -1.09
RNU4-39P-201ENST00000362455 RNGTTO60942 597 aaKnown RBP8.23□□□□□ -1.09
RNU4-39P-201ENST00000362455 ALX3O95076 343 aa8.23□□□□□ -1.09
RNU4-39P-201ENST00000362455 POLR2BP30876 1174 aaKnown RBP8.23□□□□□ -1.09
RNU4-39P-201ENST00000362455 ASPAP45381 313 aa8.23□□□□□ -1.09
RNU4-39P-201ENST00000362455 SLC6A19Q695T7 634 aa8.23□□□□□ -1.09
RNU4-39P-201ENST00000362455 CDC37L1Q7L3B6 337 aa8.23□□□□□ -1.09
RNU4-39P-201ENST00000362455 FAM178BQ8IXR5 827 aa8.23□□□□□ -1.09
RNU4-39P-201ENST00000362455 SLFN12Q8IYM2 578 aa8.23□□□□□ -1.09
RNU4-39P-201ENST00000362455 ISL2Q96A47 359 aa8.23□□□□□ -1.09
RNU4-39P-201ENST00000362455 DPH2Q9BQC3 489 aaPredicted RBP8.23□□□□□ -1.09
RNU4-39P-201ENST00000362455 FAM105AQ9NUU6 356 aa8.23□□□□□ -1.09
RNU4-39P-201ENST00000362455 FHAD1B1AJZ9 1412 aa8.22□□□□□ -1.09
RNU4-39P-201ENST00000362455 RNF225M0QZC1 329 aaPredicted RBP8.22□□□□□ -1.09
RNU4-39P-201ENST00000362455 SPATA31C1P0DKV0 1188 aa8.22□□□□□ -1.09
RNU4-39P-201ENST00000362455 RASGRF1Q13972 1273 aa8.22□□□□□ -1.09
RNU4-39P-201ENST00000362455 SLBPQ14493 270 aaKnown RBP eCLIP8.22□□□□□ -1.09
RNU4-39P-201ENST00000362455 PHACTR4Q8IZ21 702 aa8.22□□□□□ -1.09
RNU4-39P-201ENST00000362455 KCT2Q8NC54 265 aa8.22□□□□□ -1.09
RNU4-39P-201ENST00000362455 AKTIPQ9H8T0 292 aa8.22□□□□□ -1.09
RNU4-39P-201ENST00000362455 USP21Q9UK80 565 aa8.22□□□□□ -1.09
RNU4-39P-201ENST00000362455 PRG4Q92954 1404 aaPredicted RBP8.21□□□□□ -1.09
RNU4-39P-201ENST00000362455 PREPP48147 710 aa8.21□□□□□ -1.1
RNU4-39P-201ENST00000362455 IFRD2Q12894 506 aaPredicted RBP8.21□□□□□ -1.1
RNU4-39P-201ENST00000362455 VHLLQ6RSH7 139 aa8.21□□□□□ -1.1
RNU4-39P-201ENST00000362455 DNAJC7Q99615 494 aa8.21□□□□□ -1.1
RNU4-39P-201ENST00000362455 KIF2CQ99661 725 aa8.21□□□□□ -1.1
RNU4-39P-201ENST00000362455 PHAXQ9H814 394 aaKnown RBP8.21□□□□□ -1.1
RNU4-39P-201ENST00000362455 SSU72Q9NP77 194 aaKnown RBP8.21□□□□□ -1.1
RNU4-39P-201ENST00000362455 PCDHB10Q9UN67 800 aa8.21□□□□□ -1.1
RNU4-39P-201ENST00000362455 CAP2P40123 477 aa8.2□□□□□ -1.1
RNU4-39P-201ENST00000362455 PRAMEF13Q5VWM6 474 aa8.2□□□□□ -1.1
RNU4-39P-201ENST00000362455 MRM1Q6IN84 353 aaKnown RBP8.2□□□□□ -1.1
RNU4-39P-201ENST00000362455 ALYREFQ86V81 257 aaKnown RBP8.2□□□□□ -1.1
RNU4-39P-201ENST00000362455 SMYD4Q8IYR2 804 aaPredicted RBP8.2□□□□□ -1.1
RNU4-39P-201ENST00000362455 LENG1Q96BZ8 264 aaPredicted RBP8.2□□□□□ -1.1
RNU4-39P-201ENST00000362455 RNPC3Q96LT9 517 aaKnown RBP8.2□□□□□ -1.1
RNU4-39P-201ENST00000362455 ADAMTS12P58397 1594 aa8.19□□□□□ -1.1
RNU4-39P-201ENST00000362455 RGS13O14921 159 aa8.19□□□□□ -1.1
RNU4-39P-201ENST00000362455 CST3P01034 146 aaPredicted RBP8.19□□□□□ -1.1
RNU4-39P-201ENST00000362455 GLB1P16278 677 aa8.19□□□□□ -1.1
RNU4-39P-201ENST00000362455 CCNFP41002 786 aa8.19□□□□□ -1.1
RNU4-39P-201ENST00000362455 NCAPHQ15003 741 aa8.19□□□□□ -1.1
RNU4-39P-201ENST00000362455 Q6ZS46 218 aa8.19□□□□□ -1.1
RNU4-39P-201ENST00000362455 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.19□□□□□ -1.1
RNU4-39P-201ENST00000362455 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.18□□□□□ -1.1
RNU4-39P-201ENST00000362455 SART1O43290 800 aaKnown RBP8.18□□□□□ -1.1
RNU4-39P-201ENST00000362455 UBOX5O94941 541 aa8.18□□□□□ -1.1
RNU4-39P-201ENST00000362455 RAB6AP20340 208 aa8.18□□□□□ -1.1
RNU4-39P-201ENST00000362455 COL8A1P27658 744 aa8.18□□□□□ -1.1
RNU4-39P-201ENST00000362455 TCEAL1Q15170 157 aa8.18□□□□□ -1.1
RNU4-39P-201ENST00000362455 MTERF2Q49AM1 385 aa8.18□□□□□ -1.1
RNU4-39P-201ENST00000362455 LILRB2Q8N423 598 aa8.18□□□□□ -1.1
RNU4-39P-201ENST00000362455 XAGE3Q8WTP9 111 aa8.18□□□□□ -1.1
RNU4-39P-201ENST00000362455 CYB5D2Q8WUJ1 264 aa8.18□□□□□ -1.1
RNU4-39P-201ENST00000362455 KLHL6Q8WZ60 621 aa8.18□□□□□ -1.1
RNU4-39P-201ENST00000362455 CCDC74BQ96LY2 380 aa8.18□□□□□ -1.1
RNU4-39P-201ENST00000362455 CEP41Q9BYV8 373 aa8.18□□□□□ -1.1
RNU4-39P-201ENST00000362455 FOXQ1Q9C009 403 aa8.18□□□□□ -1.1
RNU4-39P-201ENST00000362455 ACSS3Q9H6R3 686 aa8.18□□□□□ -1.1
RNU4-39P-201ENST00000362455 PCOLCE2Q9UKZ9 415 aa8.18□□□□□ -1.1
RNU4-39P-201ENST00000362455 ZNF214Q9UL59 606 aaPredicted RBP8.18□□□□□ -1.1
RNU4-39P-201ENST00000362455 SHROOM2Q13796 1616 aa8.18□□□□□ -1.1
RNU4-39P-201ENST00000362455 PBRM1Q86U86 1689 aa8.18□□□□□ -1.1
RNU4-39P-201ENST00000362455 C9orf172C9J069 976 aa8.17□□□□□ -1.1
RNU4-39P-201ENST00000362455 GAS2O43903 313 aaKnown RBP8.17□□□□□ -1.1
RNU4-39P-201ENST00000362455 NOS3P29474 1203 aa8.17□□□□□ -1.1
RNU4-39P-201ENST00000362455 GBP1P32455 592 aa8.17□□□□□ -1.1
RNU4-39P-201ENST00000362455 USP11P51784 963 aa8.17□□□□□ -1.1
RNU4-39P-201ENST00000362455 SLC7A5Q01650 507 aa8.17□□□□□ -1.1
RNU4-39P-201ENST00000362455 GNPTABQ3T906 1256 aa8.17□□□□□ -1.1
RNU4-39P-201ENST00000362455 EGFLAMQ63HQ2 1017 aa8.17□□□□□ -1.1
RNU4-39P-201ENST00000362455 KIAA1211LQ6NV74 962 aa8.17□□□□□ -1.1
RNU4-39P-201ENST00000362455 ARMCX6Q7L4S7 300 aa8.17□□□□□ -1.1
RNU4-39P-201ENST00000362455 TMEM192Q8IY95 271 aa8.17□□□□□ -1.1
RNU4-39P-201ENST00000362455 BAHD1Q8TBE0 780 aaPredicted RBP8.17□□□□□ -1.1
RNU4-39P-201ENST00000362455 SH3TC2Q8TF17 1288 aa8.17□□□□□ -1.1
RNU4-39P-201ENST00000362455 SLC6A18Q96N87 628 aa8.17□□□□□ -1.1
RNU4-39P-201ENST00000362455 NACC1Q96RE7 527 aa8.17□□□□□ -1.1
RNU4-39P-201ENST00000362455 LRIG2O94898 1065 aa8.16□□□□□ -1.1
RNU4-39P-201ENST00000362455 APBA3O96018 575 aa8.16□□□□□ -1.1
RNU4-39P-201ENST00000362455 IREB2P48200 963 aaKnown RBP8.16□□□□□ -1.1
RNU4-39P-201ENST00000362455 NRG1Q02297 640 aaPredicted RBP8.16□□□□□ -1.1
RNU4-39P-201ENST00000362455 ABCC10Q5T3U5 1492 aa8.16□□□□□ -1.1
RNU4-39P-201ENST00000362455 CDPF1Q6NVV7 123 aa8.16□□□□□ -1.1
RNU4-39P-201ENST00000362455 ZNF662Q6ZS27 426 aa8.16□□□□□ -1.1
RNU4-39P-201ENST00000362455 SPATC1Q76KD6 591 aa8.16□□□□□ -1.1
RNU4-39P-201ENST00000362455 EEPD1Q7L9B9 569 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms