RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 HERC5Q9UII4 1024 aaKnown RBP24.27■■□□□ 1.48
SHISA4-201ENST00000362011 SCAF8Q9UPN6 1271 aaKnown RBP24.27■■□□□ 1.48
SHISA4-201ENST00000362011 PPP2R3BQ9Y5P8 575 aa24.27■■□□□ 1.48
SHISA4-201ENST00000362011 ERICH2A1L162 156 aa24.26■■□□□ 1.47
SHISA4-201ENST00000362011 IFIT3O14879 490 aaKnown RBP24.26■■□□□ 1.47
SHISA4-201ENST00000362011 SHMT1P34896 483 aa24.26■■□□□ 1.47
SHISA4-201ENST00000362011 FKBP1BP68106 108 aa24.26■■□□□ 1.47
SHISA4-201ENST00000362011 TFAP4Q01664 338 aa24.26■■□□□ 1.47
SHISA4-201ENST00000362011 FAM47AQ5JRC9 791 aa24.26■■□□□ 1.47
SHISA4-201ENST00000362011 REM2Q8IYK8 340 aaPredicted RBP24.26■■□□□ 1.47
SHISA4-201ENST00000362011 DNAJC18Q9H819 358 aa24.26■■□□□ 1.47
SHISA4-201ENST00000362011 LIMCH1Q9UPQ0 1083 aa24.26■■□□□ 1.47
SHISA4-201ENST00000362011 SH2B2O14492 632 aaPredicted RBP24.25■■□□□ 1.47
SHISA4-201ENST00000362011 TRPA1O75762 1119 aa24.25■■□□□ 1.47
SHISA4-201ENST00000362011 TSPY3P0CV98 308 aa24.25■■□□□ 1.47
SHISA4-201ENST00000362011 TSPY8P0CW00 308 aa24.25■■□□□ 1.47
SHISA4-201ENST00000362011 TMEM67Q5HYA8 995 aa24.25■■□□□ 1.47
SHISA4-201ENST00000362011 BRF1Q92994 677 aa24.25■■□□□ 1.47
SHISA4-201ENST00000362011 TEPSINQ96N21 525 aa24.25■■□□□ 1.47
SHISA4-201ENST00000362011 IPO9Q96P70 1041 aaKnown RBP24.25■■□□□ 1.47
SHISA4-201ENST00000362011 ZKSCAN3Q9BRR0 538 aa24.25■■□□□ 1.47
SHISA4-201ENST00000362011 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.25■■□□□ 1.47
SHISA4-201ENST00000362011 ANGEL1Q9UNK9 670 aaKnown RBP24.25■■□□□ 1.47
SHISA4-201ENST00000362011 MYH6P13533 1939 aa24.24■■□□□ 1.47
SHISA4-201ENST00000362011 FAM196BA6NMK8 535 aa24.24■■□□□ 1.47
SHISA4-201ENST00000362011 TBC1D12O60347 775 aa24.24■■□□□ 1.47
SHISA4-201ENST00000362011 RASAL3Q86YV0 1011 aa24.24■■□□□ 1.47
SHISA4-201ENST00000362011 CCDC17Q96LX7 622 aa24.24■■□□□ 1.47
SHISA4-201ENST00000362011 DAXXQ9UER7 740 aaPredicted RBP24.24■■□□□ 1.47
SHISA4-201ENST00000362011 PLIN4Q96Q06 1357 aa24.23■■□□□ 1.47
SHISA4-201ENST00000362011 PAPPA2Q9BXP8 1791 aa24.23■■□□□ 1.47
SHISA4-201ENST00000362011 TNKSO95271 1327 aa24.23■■□□□ 1.47
SHISA4-201ENST00000362011 SLURP2P0DP57 97 aa24.23■■□□□ 1.47
SHISA4-201ENST00000362011 WTAPQ15007 396 aa24.23■■□□□ 1.47
SHISA4-201ENST00000362011 CCDC178Q5BJE1 867 aa24.23■■□□□ 1.47
SHISA4-201ENST00000362011 TATDN1Q6P1N9 297 aa24.23■■□□□ 1.47
SHISA4-201ENST00000362011 CDAN1Q8IWY9 1227 aa24.23■■□□□ 1.47
SHISA4-201ENST00000362011 IGDCC4Q8TDY8 1250 aa24.23■■□□□ 1.47
SHISA4-201ENST00000362011 ZSCAN31Q96LW9 406 aaPredicted RBP24.23■■□□□ 1.47
SHISA4-201ENST00000362011 ZSCAN10Q96SZ4 725 aaPredicted RBP24.23■■□□□ 1.47
SHISA4-201ENST00000362011 LIFRP42702 1097 aa24.22■■□□□ 1.47
SHISA4-201ENST00000362011 NEDD1Q8NHV4 660 aa24.22■■□□□ 1.47
SHISA4-201ENST00000362011 HOOK2Q96ED9 719 aa24.22■■□□□ 1.47
SHISA4-201ENST00000362011 LARP6Q9BRS8 491 aaKnown RBP24.22■■□□□ 1.47
SHISA4-201ENST00000362011 LY9Q9HBG7 655 aa24.22■■□□□ 1.47
SHISA4-201ENST00000362011 GPHNQ9NQX3 736 aaPredicted RBP24.22■■□□□ 1.47
SHISA4-201ENST00000362011 TCP11L1Q9NUJ3 509 aa24.22■■□□□ 1.47
SHISA4-201ENST00000362011 TNRC18O15417 2968 aaPredicted RBP24.22■■□□□ 1.47
SHISA4-201ENST00000362011 APOBRQ0VD83 1088 aa24.21■■□□□ 1.47
SHISA4-201ENST00000362011 SEC23AQ15436 765 aa24.21■■□□□ 1.47
SHISA4-201ENST00000362011 CERKLQ49MI3 558 aaPredicted RBP24.21■■□□□ 1.47
SHISA4-201ENST00000362011 TMX3Q96JJ7 454 aa24.21■■□□□ 1.47
SHISA4-201ENST00000362011 OTOFQ9HC10 1997 aa24.21■■□□□ 1.47
SHISA4-201ENST00000362011 AKR1B1P15121 316 aa24.2■■□□□ 1.46
SHISA4-201ENST00000362011 MAP3K10Q02779 954 aa24.2■■□□□ 1.46
SHISA4-201ENST00000362011 TMTC2Q8N394 836 aa24.2■■□□□ 1.46
SHISA4-201ENST00000362011 SH2B1Q9NRF2 756 aaPredicted RBP24.2■■□□□ 1.46
SHISA4-201ENST00000362011 TPCN1Q9ULQ1 816 aa24.2■■□□□ 1.46
SHISA4-201ENST00000362011 CCDC69A6NI79 296 aa24.19■■□□□ 1.46
SHISA4-201ENST00000362011 NBPF12Q5TAG4 269 aaPredicted RBP24.19■■□□□ 1.46
SHISA4-201ENST00000362011 NFXL1Q6ZNB6 911 aa24.19■■□□□ 1.46
SHISA4-201ENST00000362011 SGMS1Q86VZ5 419 aa24.19■■□□□ 1.46
SHISA4-201ENST00000362011 ENAHQ8N8S7 591 aaPredicted RBP24.19■■□□□ 1.46
SHISA4-201ENST00000362011 KLF18A0A0U1RQI7 1052 aa24.18■■□□□ 1.46
SHISA4-201ENST00000362011 MPHOSPH10O00566 681 aaKnown RBP24.18■■□□□ 1.46
SHISA4-201ENST00000362011 NMT2O60551 498 aa24.18■■□□□ 1.46
SHISA4-201ENST00000362011 LARGE1O95461 756 aa24.18■■□□□ 1.46
SHISA4-201ENST00000362011 EVCP57679 992 aa24.18■■□□□ 1.46
SHISA4-201ENST00000362011 IFIT1BQ5T764 474 aaKnown RBP24.18■■□□□ 1.46
SHISA4-201ENST00000362011 DCAF15Q66K64 600 aa24.18■■□□□ 1.46
SHISA4-201ENST00000362011 MIGA2Q7L4E1 593 aa24.18■■□□□ 1.46
SHISA4-201ENST00000362011 IL17RBQ9NRM6 502 aa24.18■■□□□ 1.46
SHISA4-201ENST00000362011 NAP1L2Q9ULW6 460 aaPredicted RBP24.18■■□□□ 1.46
SHISA4-201ENST00000362011 ME3Q16798 604 aa24.17■■□□□ 1.46
SHISA4-201ENST00000362011 ABCB5Q2M3G0 1257 aa24.17■■□□□ 1.46
SHISA4-201ENST00000362011 CTU1Q7Z7A3 348 aaKnown RBP24.17■■□□□ 1.46
SHISA4-201ENST00000362011 ZNF274Q96GC6 653 aaPredicted RBP24.17■■□□□ 1.46
SHISA4-201ENST00000362011 SENP2Q9HC62 589 aa24.17■■□□□ 1.46
SHISA4-201ENST00000362011 SSC5DA1L4H1 1573 aa24.16■■□□□ 1.46
SHISA4-201ENST00000362011 SLC4A3P48751 1232 aa24.16■■□□□ 1.46
SHISA4-201ENST00000362011 SUPT20HL1Q3ZLR7 823 aa24.16■■□□□ 1.46
SHISA4-201ENST00000362011 DGKHQ86XP1 1220 aa24.16■■□□□ 1.46
SHISA4-201ENST00000362011 CABP5Q9NP86 173 aa24.16■■□□□ 1.46
SHISA4-201ENST00000362011 BRPF3Q9ULD4 1205 aa24.16■■□□□ 1.46
SHISA4-201ENST00000362011 PHIPQ8WWQ0 1821 aa24.16■■□□□ 1.46
SHISA4-201ENST00000362011 IGKV6D-41A0A0C4DH26 115 aa24.15■■□□□ 1.46
SHISA4-201ENST00000362011 GDF11O95390 407 aa24.15■■□□□ 1.46
SHISA4-201ENST00000362011 PPP4R3BQ5MIZ7 849 aa24.15■■□□□ 1.46
SHISA4-201ENST00000362011 PRAMEF18Q5VWM3 479 aa24.15■■□□□ 1.46
SHISA4-201ENST00000362011 APOA5Q6Q788 366 aa24.15■■□□□ 1.46
SHISA4-201ENST00000362011 SYNE3Q6ZMZ3 975 aa24.15■■□□□ 1.46
SHISA4-201ENST00000362011 TMEM179Q6ZVK1 233 aa24.15■■□□□ 1.46
SHISA4-201ENST00000362011 ANKS1AQ92625 1134 aa24.15■■□□□ 1.46
SHISA4-201ENST00000362011 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.15■■□□□ 1.46
SHISA4-201ENST00000362011 ZNF341Q9BYN7 854 aa24.15■■□□□ 1.46
SHISA4-201ENST00000362011 SLKQ9H2G2 1235 aaPredicted RBP24.15■■□□□ 1.46
SHISA4-201ENST00000362011 GOLGA8BA8MQT2 603 aa24.14■■□□□ 1.46
SHISA4-201ENST00000362011 HSP90AA1P07900 732 aaKnown RBP24.14■■□□□ 1.46
SHISA4-201ENST00000362011 PDIA3P30101 505 aaKnown RBP24.14■■□□□ 1.46
SHISA4-201ENST00000362011 STK3Q13188 491 aa24.14■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms