RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 PHF20Q9BVI0 1012 aa21.06■□□□□ 0.96
PDLIM7-203ENST00000359895 BRMS1Q9HCU9 246 aa21.06■□□□□ 0.96
PDLIM7-203ENST00000359895 TCP11L1Q9NUJ3 509 aa21.06■□□□□ 0.96
PDLIM7-203ENST00000359895 QSER1Q2KHR3 1735 aa21.06■□□□□ 0.96
PDLIM7-203ENST00000359895 PLEKHA8P1O95397 391 aa21.06■□□□□ 0.96
PDLIM7-203ENST00000359895 NPR1P16066 1061 aa21.06■□□□□ 0.96
PDLIM7-203ENST00000359895 KRT2P35908 639 aa21.06■□□□□ 0.96
PDLIM7-203ENST00000359895 SYKP43405 635 aa21.06■□□□□ 0.96
PDLIM7-203ENST00000359895 EVX2Q03828 476 aa21.06■□□□□ 0.96
PDLIM7-203ENST00000359895 IQCB1Q15051 598 aa21.06■□□□□ 0.96
PDLIM7-203ENST00000359895 MFSD14BQ5SR56 506 aa21.06■□□□□ 0.96
PDLIM7-203ENST00000359895 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.06■□□□□ 0.96
PDLIM7-203ENST00000359895 TGFBRAP1Q8WUH2 860 aa21.06■□□□□ 0.96
PDLIM7-203ENST00000359895 CNTNAP5Q8WYK1 1306 aa21.06■□□□□ 0.96
PDLIM7-203ENST00000359895 COA1Q9GZY4 146 aa21.06■□□□□ 0.96
PDLIM7-203ENST00000359895 KAT14Q9H8E8 782 aa21.06■□□□□ 0.96
PDLIM7-203ENST00000359895 MKNK2Q9HBH9 465 aa21.06■□□□□ 0.96
PDLIM7-203ENST00000359895 V9GY48 417 aaPredicted RBP21.06■□□□□ 0.96
PDLIM7-203ENST00000359895 ALDH1B1P30837 517 aa21.05■□□□□ 0.96
PDLIM7-203ENST00000359895 PDE6BP35913 854 aa21.05■□□□□ 0.96
PDLIM7-203ENST00000359895 TOB1P50616 345 aaPredicted RBP21.05■□□□□ 0.96
PDLIM7-203ENST00000359895 TFAP4Q01664 338 aa21.05■□□□□ 0.96
PDLIM7-203ENST00000359895 ZNF827Q17R98 1081 aa21.05■□□□□ 0.96
PDLIM7-203ENST00000359895 C11orf57Q6ZUT1 292 aaPredicted RBP21.05■□□□□ 0.96
PDLIM7-203ENST00000359895 COL23A1Q86Y22 540 aaPredicted RBP21.05■□□□□ 0.96
PDLIM7-203ENST00000359895 SUGT1Q9Y2Z0 365 aa21.05■□□□□ 0.96
PDLIM7-203ENST00000359895 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.05■□□□□ 0.96
PDLIM7-203ENST00000359895 GAKO14976 1311 aa21.04■□□□□ 0.96
PDLIM7-203ENST00000359895 NMT2O60551 498 aa21.04■□□□□ 0.96
PDLIM7-203ENST00000359895 RCSD1Q6JBY9 416 aa21.04■□□□□ 0.96
PDLIM7-203ENST00000359895 SHC4Q6S5L8 630 aa21.04■□□□□ 0.96
PDLIM7-203ENST00000359895 TEX11Q8IYF3 940 aa21.04■□□□□ 0.96
PDLIM7-203ENST00000359895 ZNF444Q8N0Y2 327 aaPredicted RBP21.04■□□□□ 0.96
PDLIM7-203ENST00000359895 COL11A2P13942 1736 aaPredicted RBP21.04■□□□□ 0.96
PDLIM7-203ENST00000359895 SRGNP10124 158 aa21.03■□□□□ 0.96
PDLIM7-203ENST00000359895 GNAQP50148 359 aa21.03■□□□□ 0.96
PDLIM7-203ENST00000359895 KIAA2012Q0VF49 1180 aa21.03■□□□□ 0.96
PDLIM7-203ENST00000359895 SARM1Q6SZW1 724 aa21.03■□□□□ 0.96
PDLIM7-203ENST00000359895 ELOA2Q8IYF1 753 aaPredicted RBP21.03■□□□□ 0.96
PDLIM7-203ENST00000359895 VPS54Q9P1Q0 977 aa21.03■□□□□ 0.96
PDLIM7-203ENST00000359895 BECN2A8MW95 431 aa21.02■□□□□ 0.96
PDLIM7-203ENST00000359895 BMP15O95972 392 aa21.02■□□□□ 0.96
PDLIM7-203ENST00000359895 TSPY3P0CV98 308 aa21.02■□□□□ 0.96
PDLIM7-203ENST00000359895 TSPY8P0CW00 308 aa21.02■□□□□ 0.96
PDLIM7-203ENST00000359895 NR5A1Q13285 461 aa21.02■□□□□ 0.96
PDLIM7-203ENST00000359895 MAPKAPK5Q8IW41 473 aa21.02■□□□□ 0.96
PDLIM7-203ENST00000359895 SRBD1Q8N5C6 995 aaKnown RBP21.02■□□□□ 0.96
PDLIM7-203ENST00000359895 ZNF579Q8NAF0 562 aaKnown RBP21.02■□□□□ 0.96
PDLIM7-203ENST00000359895 BPIFA3Q9BQP9 254 aa21.02■□□□□ 0.96
PDLIM7-203ENST00000359895 TRIM5Q9C035 493 aa21.02■□□□□ 0.96
PDLIM7-203ENST00000359895 FAM13BQ9NYF5 915 aa21.02■□□□□ 0.96
PDLIM7-203ENST00000359895 PARP3Q9Y6F1 533 aa21.02■□□□□ 0.96
PDLIM7-203ENST00000359895 PTPREP23469 700 aa21.02■□□□□ 0.95
PDLIM7-203ENST00000359895 ZNF75DP51815 510 aa21.02■□□□□ 0.95
PDLIM7-203ENST00000359895 PLA2G4DQ86XP0 818 aa21.02■□□□□ 0.95
PDLIM7-203ENST00000359895 OXER1Q8TDS5 423 aa21.02■□□□□ 0.95
PDLIM7-203ENST00000359895 DYNLL2Q96FJ2 89 aa21.02■□□□□ 0.95
PDLIM7-203ENST00000359895 TMX4Q9H1E5 349 aaPredicted RBP21.02■□□□□ 0.95
PDLIM7-203ENST00000359895 MYH8P13535 1937 aa21.01■□□□□ 0.95
PDLIM7-203ENST00000359895 SCG2P13521 617 aa21.01■□□□□ 0.95
PDLIM7-203ENST00000359895 CDC25BP30305 580 aa21.01■□□□□ 0.95
PDLIM7-203ENST00000359895 NLRP12P59046 1061 aa21.01■□□□□ 0.95
PDLIM7-203ENST00000359895 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.01■□□□□ 0.95
PDLIM7-203ENST00000359895 MPNDQ8N594 471 aa21.01■□□□□ 0.95
PDLIM7-203ENST00000359895 PNMA1Q8ND90 353 aa21.01■□□□□ 0.95
PDLIM7-203ENST00000359895 CABP5Q9NP86 173 aa21.01■□□□□ 0.95
PDLIM7-203ENST00000359895 IL17RBQ9NRM6 502 aa21.01■□□□□ 0.95
PDLIM7-203ENST00000359895 HOOK1Q9UJC3 728 aaKnown RBP21.01■□□□□ 0.95
PDLIM7-203ENST00000359895 FBXO2Q9UK22 296 aaPredicted RBP21.01■□□□□ 0.95
PDLIM7-203ENST00000359895 TRIM75PA6NK02 468 aa21■□□□□ 0.95
PDLIM7-203ENST00000359895 OFD1O75665 1012 aa21■□□□□ 0.95
PDLIM7-203ENST00000359895 GRM4Q14833 912 aa21■□□□□ 0.95
PDLIM7-203ENST00000359895 PFKFB3Q16875 520 aaPredicted RBP21■□□□□ 0.95
PDLIM7-203ENST00000359895 C16orf86Q6ZW13 317 aa21■□□□□ 0.95
PDLIM7-203ENST00000359895 CLIC6Q96NY7 704 aa21■□□□□ 0.95
PDLIM7-203ENST00000359895 ZC3H12CQ9C0D7 883 aaKnown RBP21■□□□□ 0.95
PDLIM7-203ENST00000359895 KCNH3Q9ULD8 1083 aa21■□□□□ 0.95
PDLIM7-203ENST00000359895 SRPRBQ9Y5M8 271 aaKnown RBP21■□□□□ 0.95
PDLIM7-203ENST00000359895 FLT1P17948 1338 aa20.99■□□□□ 0.95
PDLIM7-203ENST00000359895 RASA1P20936 1047 aa20.99■□□□□ 0.95
PDLIM7-203ENST00000359895 RHBDL3P58872 404 aa20.99■□□□□ 0.95
PDLIM7-203ENST00000359895 GTF2IP78347 998 aa20.99■□□□□ 0.95
PDLIM7-203ENST00000359895 SLC4A8Q2Y0W8 1093 aa20.99■□□□□ 0.95
PDLIM7-203ENST00000359895 SHISA4Q96DD7 197 aa20.99■□□□□ 0.95
PDLIM7-203ENST00000359895 MASTLQ96GX5 879 aa20.99■□□□□ 0.95
PDLIM7-203ENST00000359895 SH3GLB2Q9NR46 395 aa20.99■□□□□ 0.95
PDLIM7-203ENST00000359895 SAP30BPQ9UHR5 308 aaKnown RBP20.99■□□□□ 0.95
PDLIM7-203ENST00000359895 TUBE1Q9UJT0 475 aa20.99■□□□□ 0.95
PDLIM7-203ENST00000359895 PCDHB6Q9Y5E3 794 aa20.99■□□□□ 0.95
PDLIM7-203ENST00000359895 PLCD1P51178 756 aa20.98■□□□□ 0.95
PDLIM7-203ENST00000359895 DHX40Q8IX18 779 aaKnown RBP20.98■□□□□ 0.95
PDLIM7-203ENST00000359895 MMP10P09238 476 aa20.97■□□□□ 0.95
PDLIM7-203ENST00000359895 CALML3P27482 149 aa20.97■□□□□ 0.95
PDLIM7-203ENST00000359895 CDK8P49336 464 aa20.97■□□□□ 0.95
PDLIM7-203ENST00000359895 DPP8Q6V1X1 898 aaPredicted RBP20.97■□□□□ 0.95
PDLIM7-203ENST00000359895 KRBA2Q6ZNG9 492 aa20.97■□□□□ 0.95
PDLIM7-203ENST00000359895 FAM177A1Q8N128 213 aaPredicted RBP20.97■□□□□ 0.95
PDLIM7-203ENST00000359895 EYA3Q99504 573 aa20.97■□□□□ 0.95
PDLIM7-203ENST00000359895 LZTS2Q9BRK4 669 aa20.97■□□□□ 0.95
PDLIM7-203ENST00000359895 hCG_1642624A0A1W2PR95 340 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms