RNA–Protein interactions for RNA: ENST00000338372.6

VSTM1-201, Transcript of V-set and transmembrane domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSTM1, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-201ENST00000338372 PRKAB2O43741 272 aa20.66■□□□□ 0.9
VSTM1-201ENST00000338372 SMARCA5O60264 1052 aaPredicted RBP20.66■□□□□ 0.9
VSTM1-201ENST00000338372 CYP2D6P10635 497 aa20.66■□□□□ 0.9
VSTM1-201ENST00000338372 ABCB5Q2M3G0 1257 aa20.66■□□□□ 0.9
VSTM1-201ENST00000338372 CATSPERGQ6ZRH7 1159 aa20.66■□□□□ 0.9
VSTM1-201ENST00000338372 SIAH1Q8IUQ4 282 aa20.66■□□□□ 0.9
VSTM1-201ENST00000338372 CRNKL1Q9BZJ0 848 aaKnown RBP20.66■□□□□ 0.9
VSTM1-201ENST00000338372 CHMP4BQ9H444 224 aaKnown RBP20.66■□□□□ 0.9
VSTM1-201ENST00000338372 RANBP2P49792 3224 aaKnown RBP20.65■□□□□ 0.9
VSTM1-201ENST00000338372 MNX1P50219 401 aaPredicted RBP20.65■□□□□ 0.9
VSTM1-201ENST00000338372 ERVK-9P63128 1117 aa20.65■□□□□ 0.9
VSTM1-201ENST00000338372 ERVK-24P63145 666 aa20.65■□□□□ 0.9
VSTM1-201ENST00000338372 MAP3K21Q5TCX8 1036 aa20.65■□□□□ 0.9
VSTM1-201ENST00000338372 GPRC5AQ8NFJ5 357 aa20.65■□□□□ 0.9
VSTM1-201ENST00000338372 TRIB2Q92519 343 aa20.65■□□□□ 0.9
VSTM1-201ENST00000338372 DCTPP1Q9H773 170 aa20.65■□□□□ 0.9
VSTM1-201ENST00000338372 ARMT1Q9H993 441 aa20.65■□□□□ 0.9
VSTM1-201ENST00000338372 MCM9Q9NXL9 1143 aa20.65■□□□□ 0.9
VSTM1-201ENST00000338372 SEPT2Q15019 361 aa20.64■□□□□ 0.89
VSTM1-201ENST00000338372 RAB3GAP1Q15042 981 aa20.64■□□□□ 0.89
VSTM1-201ENST00000338372 MORN1Q5T089 497 aa20.64■□□□□ 0.89
VSTM1-201ENST00000338372 LBX2Q6XYB7 198 aa20.64■□□□□ 0.89
VSTM1-201ENST00000338372 SLC44A5Q8NCS7 719 aa20.64■□□□□ 0.89
VSTM1-201ENST00000338372 DEFB118Q96PH6 123 aa20.64■□□□□ 0.89
VSTM1-201ENST00000338372 COLQQ9Y215 455 aaPredicted RBP20.64■□□□□ 0.89
VSTM1-201ENST00000338372 USP17L15C9J2P7 530 aa20.63■□□□□ 0.89
VSTM1-201ENST00000338372 USP17L13C9JLJ4 530 aa20.63■□□□□ 0.89
VSTM1-201ENST00000338372 USP17L11C9JVI0 530 aa20.63■□□□□ 0.89
VSTM1-201ENST00000338372 USP17L18D6R9N7 530 aa20.63■□□□□ 0.89
VSTM1-201ENST00000338372 USP17L22D6RA61 530 aa20.63■□□□□ 0.89
VSTM1-201ENST00000338372 USP17L17D6RBQ6 530 aa20.63■□□□□ 0.89
VSTM1-201ENST00000338372 USP17L19D6RCP7 530 aa20.63■□□□□ 0.89
VSTM1-201ENST00000338372 USP17L20D6RJB6 530 aa20.63■□□□□ 0.89
VSTM1-201ENST00000338372 HMGCRP04035 888 aa20.63■□□□□ 0.89
VSTM1-201ENST00000338372 POLR3DP05423 398 aaPredicted RBP20.63■□□□□ 0.89
VSTM1-201ENST00000338372 XRCC5P13010 732 aaKnown RBP20.63■□□□□ 0.89
VSTM1-201ENST00000338372 CAPN2P17655 700 aa20.63■□□□□ 0.89
VSTM1-201ENST00000338372 VCAM1P19320 739 aa20.63■□□□□ 0.89
VSTM1-201ENST00000338372 USP17L24Q0WX57 530 aa20.63■□□□□ 0.89
VSTM1-201ENST00000338372 UBE3CQ15386 1083 aa20.63■□□□□ 0.89
VSTM1-201ENST00000338372 KIAA1755Q5JYT7 1200 aa20.63■□□□□ 0.89
VSTM1-201ENST00000338372 DYNLL2Q96FJ2 89 aa20.63■□□□□ 0.89
VSTM1-201ENST00000338372 LRRCC1Q9C099 1032 aa20.63■□□□□ 0.89
VSTM1-201ENST00000338372 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.63■□□□□ 0.89
VSTM1-201ENST00000338372 A0A0G2JMZ2 1700 aa20.63■□□□□ 0.89
VSTM1-201ENST00000338372 TRIOBPQ9H2D6 2365 aa20.63■□□□□ 0.89
VSTM1-201ENST00000338372 GREB1LQ9C091 1923 aaPredicted RBP20.63■□□□□ 0.89
VSTM1-201ENST00000338372 FARP2O94887 1054 aaPredicted RBP20.62■□□□□ 0.89
VSTM1-201ENST00000338372 MBD4O95243 580 aa20.62■□□□□ 0.89
VSTM1-201ENST00000338372 USP14P54578 494 aa20.62■□□□□ 0.89
VSTM1-201ENST00000338372 ZYXQ15942 572 aaKnown RBP20.62■□□□□ 0.89
VSTM1-201ENST00000338372 GPR142Q7Z601 462 aa20.62■□□□□ 0.89
VSTM1-201ENST00000338372 GTF3C2Q8WUA4 911 aaPredicted RBP20.62■□□□□ 0.89
VSTM1-201ENST00000338372 PRO3102Q9H379 93 aa20.62■□□□□ 0.89
VSTM1-201ENST00000338372 BTBD7Q9P203 1132 aa20.62■□□□□ 0.89
VSTM1-201ENST00000338372 RABGAP1Q9Y3P9 1069 aa20.62■□□□□ 0.89
VSTM1-201ENST00000338372 RPTORQ8N122 1335 aa20.61■□□□□ 0.89
VSTM1-201ENST00000338372 IGHA2P01877 340 aa20.61■□□□□ 0.89
VSTM1-201ENST00000338372 CYP2B6P20813 491 aa20.61■□□□□ 0.89
VSTM1-201ENST00000338372 MAPK4P31152 587 aa20.61■□□□□ 0.89
VSTM1-201ENST00000338372 C12orf60Q5U649 245 aa20.61■□□□□ 0.89
VSTM1-201ENST00000338372 PUS7LQ9H0K6 701 aaKnown RBP20.61■□□□□ 0.89
VSTM1-201ENST00000338372 CABP5Q9NP86 173 aa20.61■□□□□ 0.89
VSTM1-201ENST00000338372 ATP8A2Q9NTI2 1148 aa20.61■□□□□ 0.89
VSTM1-201ENST00000338372 TAOK2Q9UL54 1235 aa20.61■□□□□ 0.89
VSTM1-201ENST00000338372 CYP2D7A0A087X1C5 515 aa20.6■□□□□ 0.89
VSTM1-201ENST00000338372 SPDYE16A6NNV3 312 aaPredicted RBP20.6■□□□□ 0.89
VSTM1-201ENST00000338372 FXR1P51114 621 aaKnown RBP eCLIP20.6■□□□□ 0.89
VSTM1-201ENST00000338372 NUDT12Q9BQG2 462 aa20.6■□□□□ 0.89
VSTM1-201ENST00000338372 BCL11AQ9H165 835 aa20.6■□□□□ 0.89
VSTM1-201ENST00000338372 FRMPD3Q5JV73 1810 aa20.6■□□□□ 0.89
VSTM1-201ENST00000338372 AKR1B1P15121 316 aa20.59■□□□□ 0.89
VSTM1-201ENST00000338372 CCL14Q16627 93 aa20.59■□□□□ 0.89
VSTM1-201ENST00000338372 DIS3LQ8TF46 1054 aaKnown RBP20.59■□□□□ 0.89
VSTM1-201ENST00000338372 PAGR1Q9BTK6 254 aa20.59■□□□□ 0.89
VSTM1-201ENST00000338372 PCDHB15Q9Y5E8 787 aa20.59■□□□□ 0.89
VSTM1-201ENST00000338372 ZNFX1Q9P2E3 1918 aaKnown RBP20.59■□□□□ 0.89
VSTM1-201ENST00000338372 USP17L12C9JPN9 530 aa20.58■□□□□ 0.89
VSTM1-201ENST00000338372 USP17L21D6R901 530 aa20.58■□□□□ 0.89
VSTM1-201ENST00000338372 TFRCP02786 760 aaKnown RBP20.58■□□□□ 0.89
VSTM1-201ENST00000338372 PLEKHH3Q7Z736 793 aa20.58■□□□□ 0.89
VSTM1-201ENST00000338372 SOCS4Q8WXH5 440 aa20.58■□□□□ 0.89
VSTM1-201ENST00000338372 FEZ1Q99689 392 aa20.58■□□□□ 0.89
VSTM1-201ENST00000338372 RPAP3Q9H6T3 665 aaPredicted RBP20.58■□□□□ 0.89
VSTM1-201ENST00000338372 ECHDC1Q9NTX5 307 aa20.58■□□□□ 0.89
VSTM1-201ENST00000338372 SWAP70Q9UH65 585 aa20.58■□□□□ 0.89
VSTM1-201ENST00000338372 OGDHLQ9ULD0 1010 aa20.58■□□□□ 0.89
VSTM1-201ENST00000338372 SZT2Q5T011 3432 aa20.58■□□□□ 0.88
VSTM1-201ENST00000338372 COL11A1P12107 1806 aaPredicted RBP20.57■□□□□ 0.88
VSTM1-201ENST00000338372 CDK8P49336 464 aa20.57■□□□□ 0.88
VSTM1-201ENST00000338372 CACNB2Q08289 660 aaPredicted RBP20.57■□□□□ 0.88
VSTM1-201ENST00000338372 CTR9Q6PD62 1173 aa20.57■□□□□ 0.88
VSTM1-201ENST00000338372 TMEM179Q6ZVK1 233 aa20.57■□□□□ 0.88
VSTM1-201ENST00000338372 C16orf86Q6ZW13 317 aa20.57■□□□□ 0.88
VSTM1-201ENST00000338372 CLEC10AQ8IUN9 316 aa20.57■□□□□ 0.88
VSTM1-201ENST00000338372 DPF3Q92784 378 aa20.57■□□□□ 0.88
VSTM1-201ENST00000338372 PAWRQ96IZ0 340 aaKnown RBP20.57■□□□□ 0.88
VSTM1-201ENST00000338372 STRBPQ96SI9 672 aaKnown RBP20.57■□□□□ 0.88
VSTM1-201ENST00000338372 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.57■□□□□ 0.88
VSTM1-201ENST00000338372 HMX1Q9NP08 348 aaPredicted RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms