RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 PGBD1Q96JS3 809 aa18.09■□□□□ 0.49
PTCH1-201ENST00000331920 NLRP7Q8WX94 980 aa18.09■□□□□ 0.49
PTCH1-201ENST00000331920 SUCLA2Q9P2R7 463 aaPredicted RBP18.09■□□□□ 0.49
PTCH1-201ENST00000331920 HIP1RO75146 1068 aa18.09■□□□□ 0.49
PTCH1-201ENST00000331920 NMIQ13287 307 aaPredicted RBP18.09■□□□□ 0.49
PTCH1-201ENST00000331920 TBCCQ15814 346 aa18.09■□□□□ 0.49
PTCH1-201ENST00000331920 SLC9C1Q4G0N8 1177 aa18.09■□□□□ 0.49
PTCH1-201ENST00000331920 ANKRD13DQ6ZTN6 518 aa18.09■□□□□ 0.49
PTCH1-201ENST00000331920 CAMSAP2Q08AD1 1489 aa18.09■□□□□ 0.49
PTCH1-201ENST00000331920 OCM2P0CE71 109 aa18.09■□□□□ 0.49
PTCH1-201ENST00000331920 OCMP0CE72 109 aaPredicted RBP18.09■□□□□ 0.49
PTCH1-201ENST00000331920 TTC19Q6DKK2 380 aaPredicted RBP18.09■□□□□ 0.49
PTCH1-201ENST00000331920 TRMT10CQ7L0Y3 403 aaKnown RBP18.09■□□□□ 0.49
PTCH1-201ENST00000331920 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.09■□□□□ 0.49
PTCH1-201ENST00000331920 PIK3AP1Q6ZUJ8 805 aa18.09■□□□□ 0.49
PTCH1-201ENST00000331920 DYMQ7RTS9 669 aa18.09■□□□□ 0.49
PTCH1-201ENST00000331920 KLHL14Q9P2G3 628 aa18.09■□□□□ 0.49
PTCH1-201ENST00000331920 AZI2Q9H6S1 392 aa18.08■□□□□ 0.49
PTCH1-201ENST00000331920 IFT122Q9HBG6 1241 aa18.08■□□□□ 0.49
PTCH1-201ENST00000331920 DDX41Q9UJV9 622 aaKnown RBP18.08■□□□□ 0.49
PTCH1-201ENST00000331920 SZRD1Q7Z422 152 aa18.08■□□□□ 0.48
PTCH1-201ENST00000331920 TEX13AQ9BXU3 409 aaPredicted RBP18.08■□□□□ 0.48
PTCH1-201ENST00000331920 ABCB4P21439 1286 aa18.08■□□□□ 0.48
PTCH1-201ENST00000331920 NME9Q86XW9 330 aa18.08■□□□□ 0.48
PTCH1-201ENST00000331920 EIF2AQ9BY44 585 aaKnown RBP18.08■□□□□ 0.48
PTCH1-201ENST00000331920 EEF1DP29692 281 aaKnown RBP18.08■□□□□ 0.48
PTCH1-201ENST00000331920 KIF11P52732 1056 aa18.08■□□□□ 0.48
PTCH1-201ENST00000331920 IQCB1Q15051 598 aa18.08■□□□□ 0.48
PTCH1-201ENST00000331920 ANGPTL8Q6UXH0 198 aa18.08■□□□□ 0.48
PTCH1-201ENST00000331920 FNDC3AQ9Y2H6 1198 aaKnown RBP18.08■□□□□ 0.48
PTCH1-201ENST00000331920 OAS2P29728 719 aaKnown RBP18.08■□□□□ 0.48
PTCH1-201ENST00000331920 TTBK2Q6IQ55 1244 aa18.08■□□□□ 0.48
PTCH1-201ENST00000331920 ATP6V1E2Q96A05 226 aa18.08■□□□□ 0.48
PTCH1-201ENST00000331920 GTPBP10A4D1E9 387 aaKnown RBP18.07■□□□□ 0.48
PTCH1-201ENST00000331920 TUBB4AP04350 444 aa18.07■□□□□ 0.48
PTCH1-201ENST00000331920 PARP3Q9Y6F1 533 aa18.07■□□□□ 0.48
PTCH1-201ENST00000331920 FAM83GA6ND36 823 aa18.07■□□□□ 0.48
PTCH1-201ENST00000331920 P3H4Q92791 437 aa18.07■□□□□ 0.48
PTCH1-201ENST00000331920 EPS15L1Q9UBC2 864 aa18.07■□□□□ 0.48
PTCH1-201ENST00000331920 MAD1L1Q9Y6D9 718 aa18.07■□□□□ 0.48
PTCH1-201ENST00000331920 STAM2O75886 525 aa18.07■□□□□ 0.48
PTCH1-201ENST00000331920 ADCY8P40145 1251 aa18.07■□□□□ 0.48
PTCH1-201ENST00000331920 CFAP221Q4G0U5 840 aa18.07■□□□□ 0.48
PTCH1-201ENST00000331920 TYW1BQ6NUM6 668 aa18.07■□□□□ 0.48
PTCH1-201ENST00000331920 KLHDC4Q8TBB5 520 aa18.07■□□□□ 0.48
PTCH1-201ENST00000331920 DNM2P50570 870 aa18.07■□□□□ 0.48
PTCH1-201ENST00000331920 TTC30AQ86WT1 665 aa18.07■□□□□ 0.48
PTCH1-201ENST00000331920 CTNNA1P35221 906 aaKnown RBP18.07■□□□□ 0.48
PTCH1-201ENST00000331920 SYCE1Q8N0S2 351 aa18.07■□□□□ 0.48
PTCH1-201ENST00000331920 CPXCR1Q8N123 301 aa18.07■□□□□ 0.48
PTCH1-201ENST00000331920 PAK2Q13177 524 aa18.06■□□□□ 0.48
PTCH1-201ENST00000331920 ATAD2Q6PL18 1390 aa18.06■□□□□ 0.48
PTCH1-201ENST00000331920 PIK3R4Q99570 1358 aa18.06■□□□□ 0.48
PTCH1-201ENST00000331920 TUBBP07437 444 aa18.06■□□□□ 0.48
PTCH1-201ENST00000331920 UHMK1Q8TAS1 419 aaKnown RBP18.06■□□□□ 0.48
PTCH1-201ENST00000331920 ZNF277Q9NRM2 450 aaPredicted RBP18.06■□□□□ 0.48
PTCH1-201ENST00000331920 RPS6KA1Q15418 735 aa18.06■□□□□ 0.48
PTCH1-201ENST00000331920 NELFCDQ8IXH7 590 aa18.06■□□□□ 0.48
PTCH1-201ENST00000331920 MYL5Q02045 173 aa18.06■□□□□ 0.48
PTCH1-201ENST00000331920 FAM186BQ8IYM0 893 aa18.06■□□□□ 0.48
PTCH1-201ENST00000331920 POLR3CQ9BUI4 534 aaPredicted RBP18.06■□□□□ 0.48
PTCH1-201ENST00000331920 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.06■□□□□ 0.48
PTCH1-201ENST00000331920 THAP12O43422 761 aa18.06■□□□□ 0.48
PTCH1-201ENST00000331920 IPO11Q9UI26 975 aaKnown RBP18.06■□□□□ 0.48
PTCH1-201ENST00000331920 H3BRJ5 948 aa18.05■□□□□ 0.48
PTCH1-201ENST00000331920 KRT33BQ14525 404 aa18.05■□□□□ 0.48
PTCH1-201ENST00000331920 AP1ARQ63HQ0 302 aa18.05■□□□□ 0.48
PTCH1-201ENST00000331920 TRIM59Q8IWR1 403 aa18.05■□□□□ 0.48
PTCH1-201ENST00000331920 PTPN22Q9Y2R2 807 aa18.05■□□□□ 0.48
PTCH1-201ENST00000331920 PFDN6O15212 129 aa18.05■□□□□ 0.48
PTCH1-201ENST00000331920 P4HA1P13674 534 aa18.05■□□□□ 0.48
PTCH1-201ENST00000331920 CCDC184Q52MB2 194 aa18.05■□□□□ 0.48
PTCH1-201ENST00000331920 ZSCAN32Q9NX65 697 aa18.05■□□□□ 0.48
PTCH1-201ENST00000331920 EXOC3O60645 756 aa18.05■□□□□ 0.48
PTCH1-201ENST00000331920 XPAP23025 273 aaPredicted RBP18.05■□□□□ 0.48
PTCH1-201ENST00000331920 DAB2P98082 770 aa18.05■□□□□ 0.48
PTCH1-201ENST00000331920 CHRNA2Q15822 529 aa18.05■□□□□ 0.48
PTCH1-201ENST00000331920 RAB17Q9H0T7 212 aa18.05■□□□□ 0.48
PTCH1-201ENST00000331920 ARHGEF10LQ9HCE6 1279 aa18.05■□□□□ 0.48
PTCH1-201ENST00000331920 SNRPA1P09661 255 aaKnown RBP18.05■□□□□ 0.48
PTCH1-201ENST00000331920 GNAT2P19087 354 aa18.05■□□□□ 0.48
PTCH1-201ENST00000331920 HLA-DPA1P20036 260 aa18.05■□□□□ 0.48
PTCH1-201ENST00000331920 HAUS3Q68CZ6 603 aa18.05■□□□□ 0.48
PTCH1-201ENST00000331920 RPAINQ86UA6 219 aa18.05■□□□□ 0.48
PTCH1-201ENST00000331920 RHPN1Q8TCX5 695 aa18.05■□□□□ 0.48
PTCH1-201ENST00000331920 ALKBH8Q96BT7 664 aaKnown RBP18.05■□□□□ 0.48
PTCH1-201ENST00000331920 CCDC124Q96CT7 223 aaKnown RBP18.05■□□□□ 0.48
PTCH1-201ENST00000331920 PLCG2P16885 1265 aa18.05■□□□□ 0.48
PTCH1-201ENST00000331920 ZNF653Q96CK0 615 aa18.05■□□□□ 0.48
PTCH1-201ENST00000331920 TFCP2L1Q9NZI6 479 aa18.05■□□□□ 0.48
PTCH1-201ENST00000331920 CCDC61Q9Y6R9 512 aa18.05■□□□□ 0.48
PTCH1-201ENST00000331920 PYGLP06737 847 aa18.04■□□□□ 0.48
PTCH1-201ENST00000331920 CCDC85BQ15834 202 aaPredicted RBP18.04■□□□□ 0.48
PTCH1-201ENST00000331920 MTMR3Q13615 1198 aa18.04■□□□□ 0.48
PTCH1-201ENST00000331920 KCNA4P22459 653 aa18.04■□□□□ 0.48
PTCH1-201ENST00000331920 PLCD1P51178 756 aa18.04■□□□□ 0.48
PTCH1-201ENST00000331920 KLHL30Q0D2K2 578 aa18.04■□□□□ 0.48
PTCH1-201ENST00000331920 HINFPQ9BQA5 517 aa18.04■□□□□ 0.48
PTCH1-201ENST00000331920 RAB20Q9NX57 234 aa18.04■□□□□ 0.48
PTCH1-201ENST00000331920 INTUQ9ULD6 942 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms