RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 MPHOSPH6Q99547 160 aaKnown RBP6.05□□□□□ -1.44
LRIT3-201ENST00000327908 ANGEL1Q9UNK9 670 aaKnown RBP6.05□□□□□ -1.44
LRIT3-201ENST00000327908 KCNH4Q9UQ05 1017 aa6.05□□□□□ -1.44
LRIT3-201ENST00000327908 WTIPA6NIX2 430 aaPredicted RBP6.05□□□□□ -1.44
LRIT3-201ENST00000327908 E7EWF7 191 aa6.05□□□□□ -1.44
LRIT3-201ENST00000327908 GCLCP48506 637 aaPredicted RBP6.05□□□□□ -1.44
LRIT3-201ENST00000327908 NOVP48745 357 aa6.05□□□□□ -1.44
LRIT3-201ENST00000327908 NOM1Q5C9Z4 860 aaKnown RBP6.05□□□□□ -1.44
LRIT3-201ENST00000327908 IFIT1BQ5T764 474 aaKnown RBP6.05□□□□□ -1.44
LRIT3-201ENST00000327908 RGMBQ6NW40 437 aa6.05□□□□□ -1.44
LRIT3-201ENST00000327908 ADGRA1Q86SQ6 560 aa6.05□□□□□ -1.44
LRIT3-201ENST00000327908 SDR42E1Q8WUS8 393 aa6.05□□□□□ -1.44
LRIT3-201ENST00000327908 ZNF274Q96GC6 653 aaPredicted RBP6.05□□□□□ -1.44
LRIT3-201ENST00000327908 ZSCAN10Q96SZ4 725 aaPredicted RBP6.05□□□□□ -1.44
LRIT3-201ENST00000327908 ZSWIM6Q9HCJ5 1215 aa6.05□□□□□ -1.44
LRIT3-201ENST00000327908 DAXXQ9UER7 740 aaPredicted RBP6.05□□□□□ -1.44
LRIT3-201ENST00000327908 SAP30BPQ9UHR5 308 aaKnown RBP6.05□□□□□ -1.44
LRIT3-201ENST00000327908 FEM1BQ9UK73 627 aa6.05□□□□□ -1.44
LRIT3-201ENST00000327908 IFIT3O14879 490 aaKnown RBP6.05□□□□□ -1.44
LRIT3-201ENST00000327908 RANBP6O60518 1105 aaKnown RBP6.05□□□□□ -1.44
LRIT3-201ENST00000327908 RASA1P20936 1047 aa6.05□□□□□ -1.44
LRIT3-201ENST00000327908 RPS6KB1P23443 525 aa6.05□□□□□ -1.44
LRIT3-201ENST00000327908 OAZ1P54368 228 aa6.05□□□□□ -1.44
LRIT3-201ENST00000327908 CCNA1P78396 465 aa6.05□□□□□ -1.44
LRIT3-201ENST00000327908 HMGN5P82970 282 aaKnown RBP6.05□□□□□ -1.44
LRIT3-201ENST00000327908 AKAP17AQ02040 695 aaKnown RBP6.05□□□□□ -1.44
LRIT3-201ENST00000327908 TCP10Q12799 353 aa6.05□□□□□ -1.44
LRIT3-201ENST00000327908 TMEM67Q5HYA8 995 aa6.05□□□□□ -1.44
LRIT3-201ENST00000327908 NFXL1Q6ZNB6 911 aa6.05□□□□□ -1.44
LRIT3-201ENST00000327908 RUFY3Q7L099 469 aa6.05□□□□□ -1.44
LRIT3-201ENST00000327908 ANKRD23Q86SG2 305 aa6.05□□□□□ -1.44
LRIT3-201ENST00000327908 ZNF280CQ8ND82 737 aa6.05□□□□□ -1.44
LRIT3-201ENST00000327908 LLPHQ9BRT6 129 aaKnown RBP6.05□□□□□ -1.44
LRIT3-201ENST00000327908 EHMT1Q9H9B1 1298 aa6.05□□□□□ -1.44
LRIT3-201ENST00000327908 DDX4Q9NQI0 724 aaKnown RBP6.05□□□□□ -1.44
LRIT3-201ENST00000327908 IGKV6D-41A0A0C4DH26 115 aa6.04□□□□□ -1.44
LRIT3-201ENST00000327908 USP17L10C9JJH3 530 aa6.04□□□□□ -1.44
LRIT3-201ENST00000327908 MPHOSPH10O00566 681 aaKnown RBP6.04□□□□□ -1.44
LRIT3-201ENST00000327908 SHMT1P34896 483 aa6.04□□□□□ -1.44
LRIT3-201ENST00000327908 PPP1R18Q6NYC8 613 aa6.04□□□□□ -1.44
LRIT3-201ENST00000327908 HSCBQ8IWL3 235 aa6.04□□□□□ -1.44
LRIT3-201ENST00000327908 MB21D2Q8IYB1 491 aaPredicted RBP6.04□□□□□ -1.44
LRIT3-201ENST00000327908 SNX21Q969T3 373 aa6.04□□□□□ -1.44
LRIT3-201ENST00000327908 WNK4Q96J92 1243 aa6.04□□□□□ -1.44
LRIT3-201ENST00000327908 JAKMIP1Q96N16 626 aaKnown RBP6.04□□□□□ -1.44
LRIT3-201ENST00000327908 PARK7Q99497 189 aaKnown RBP6.04□□□□□ -1.44
LRIT3-201ENST00000327908 TANGO6Q9C0B7 1094 aa6.04□□□□□ -1.44
LRIT3-201ENST00000327908 PDRG1Q9NUG6 133 aa6.04□□□□□ -1.44
LRIT3-201ENST00000327908 SAGE1Q9NXZ1 904 aa6.04□□□□□ -1.44
LRIT3-201ENST00000327908 RASSF10A6NK89 507 aa6.04□□□□□ -1.44
LRIT3-201ENST00000327908 USP17L15C9J2P7 530 aa6.04□□□□□ -1.44
LRIT3-201ENST00000327908 USP17L13C9JLJ4 530 aa6.04□□□□□ -1.44
LRIT3-201ENST00000327908 USP17L11C9JVI0 530 aa6.04□□□□□ -1.44
LRIT3-201ENST00000327908 USP17L18D6R9N7 530 aa6.04□□□□□ -1.44
LRIT3-201ENST00000327908 USP17L22D6RA61 530 aa6.04□□□□□ -1.44
LRIT3-201ENST00000327908 USP17L17D6RBQ6 530 aa6.04□□□□□ -1.44
LRIT3-201ENST00000327908 USP17L19D6RCP7 530 aa6.04□□□□□ -1.44
LRIT3-201ENST00000327908 USP17L20D6RJB6 530 aa6.04□□□□□ -1.44
LRIT3-201ENST00000327908 PRC1O43663 620 aa6.04□□□□□ -1.44
LRIT3-201ENST00000327908 ANP32AP39687 249 aaKnown RBP6.04□□□□□ -1.44
LRIT3-201ENST00000327908 TFAP4Q01664 338 aa6.04□□□□□ -1.44
LRIT3-201ENST00000327908 USP17L24Q0WX57 530 aa6.04□□□□□ -1.44
LRIT3-201ENST00000327908 NFIAQ12857 509 aa6.04□□□□□ -1.44
LRIT3-201ENST00000327908 CCDC129Q6ZRS4 1044 aa6.04□□□□□ -1.44
LRIT3-201ENST00000327908 GLIS2Q9BZE0 524 aaPredicted RBP6.04□□□□□ -1.44
LRIT3-201ENST00000327908 TMEM39BQ9GZU3 492 aa6.04□□□□□ -1.44
LRIT3-201ENST00000327908 VCPKMTQ9H867 229 aa6.04□□□□□ -1.44
LRIT3-201ENST00000327908 MAP3K20Q9NYL2 800 aaKnown RBP6.04□□□□□ -1.44
LRIT3-201ENST00000327908 PALD1Q9ULE6 856 aa6.04□□□□□ -1.44
LRIT3-201ENST00000327908 TMX2Q9Y320 296 aa6.04□□□□□ -1.44
LRIT3-201ENST00000327908 SNX14Q9Y5W7 946 aa6.04□□□□□ -1.44
LRIT3-201ENST00000327908 NDUFB9Q9Y6M9 179 aa6.04□□□□□ -1.44
LRIT3-201ENST00000327908 ITGBL1O95965 494 aaPredicted RBP6.04□□□□□ -1.44
LRIT3-201ENST00000327908 SLC10A3P09131 477 aa6.04□□□□□ -1.44
LRIT3-201ENST00000327908 PRMT2P55345 433 aa6.04□□□□□ -1.44
LRIT3-201ENST00000327908 TRIM22Q8IYM9 498 aa6.04□□□□□ -1.44
LRIT3-201ENST00000327908 SEC62Q99442 399 aaKnown RBP6.04□□□□□ -1.44
LRIT3-201ENST00000327908 MTMR4Q9NYA4 1195 aa6.04□□□□□ -1.44
LRIT3-201ENST00000327908 FBXO40Q9UH90 709 aa6.04□□□□□ -1.44
LRIT3-201ENST00000327908 RABGAP1Q9Y3P9 1069 aa6.04□□□□□ -1.44
LRIT3-201ENST00000327908 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.04□□□□□ -1.44
LRIT3-201ENST00000327908 SLC12A7Q9Y666 1083 aa6.04□□□□□ -1.44
LRIT3-201ENST00000327908 GREB1LQ9C091 1923 aaPredicted RBP6.04□□□□□ -1.44
LRIT3-201ENST00000327908 MYO5AQ9Y4I1 1855 aaKnown RBP6.03□□□□□ -1.44
LRIT3-201ENST00000327908 TESPA1A2RU30 521 aaPredicted RBP6.03□□□□□ -1.44
LRIT3-201ENST00000327908 DDTLA6NHG4 134 aaPredicted RBP6.03□□□□□ -1.44
LRIT3-201ENST00000327908 PRKAB2O43741 272 aa6.03□□□□□ -1.44
LRIT3-201ENST00000327908 USP2O75604 605 aaPredicted RBP6.03□□□□□ -1.44
LRIT3-201ENST00000327908 CYP21A2P08686 494 aa6.03□□□□□ -1.44
LRIT3-201ENST00000327908 PDCP20941 246 aa6.03□□□□□ -1.44
LRIT3-201ENST00000327908 HUNKP57058 714 aa6.03□□□□□ -1.44
LRIT3-201ENST00000327908 EVCP57679 992 aa6.03□□□□□ -1.44
LRIT3-201ENST00000327908 PTH1RQ03431 593 aa6.03□□□□□ -1.44
LRIT3-201ENST00000327908 NBPF12Q5TAG4 269 aaPredicted RBP6.03□□□□□ -1.44
LRIT3-201ENST00000327908 GALNT17Q6IS24 598 aa6.03□□□□□ -1.44
LRIT3-201ENST00000327908 TRMT44Q8IYL2 757 aaKnown RBP6.03□□□□□ -1.44
LRIT3-201ENST00000327908 NAP1L4Q99733 375 aaKnown RBP6.03□□□□□ -1.44
LRIT3-201ENST00000327908 CFHR5Q9BXR6 569 aa6.03□□□□□ -1.44
LRIT3-201ENST00000327908 AGXT2Q9BYV1 514 aa6.03□□□□□ -1.44
LRIT3-201ENST00000327908 SLC5A4Q9NY91 659 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms