RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 ZNF532Q9HCE3 1301 aa16.59■□□□□ 0.25
COL6A2-202ENST00000310645 RPS6KA5O75582 802 aa16.59■□□□□ 0.25
COL6A2-202ENST00000310645 LIG3P49916 1009 aa16.59■□□□□ 0.25
COL6A2-202ENST00000310645 KRT31Q15323 416 aa16.59■□□□□ 0.25
COL6A2-202ENST00000310645 AIDAQ96BJ3 306 aa16.59■□□□□ 0.25
COL6A2-202ENST00000310645 NWD2Q9ULI1 1742 aa16.59■□□□□ 0.25
COL6A2-202ENST00000310645 FMNL1O95466 1100 aaPredicted RBP16.59■□□□□ 0.25
COL6A2-202ENST00000310645 STIM1Q13586 685 aa16.59■□□□□ 0.25
COL6A2-202ENST00000310645 RTN1Q16799 776 aa16.59■□□□□ 0.25
COL6A2-202ENST00000310645 RRAGBQ5VZM2 374 aa16.59■□□□□ 0.25
COL6A2-202ENST00000310645 CYP26C1Q6V0L0 522 aa16.59■□□□□ 0.25
COL6A2-202ENST00000310645 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.59■□□□□ 0.25
COL6A2-202ENST00000310645 PAGE5Q96GU1 130 aa16.59■□□□□ 0.25
COL6A2-202ENST00000310645 GGCXP38435 758 aa16.58■□□□□ 0.25
COL6A2-202ENST00000310645 CCT5P48643 541 aa16.58■□□□□ 0.25
COL6A2-202ENST00000310645 DPYDQ12882 1025 aa16.58■□□□□ 0.25
COL6A2-202ENST00000310645 TTC19Q6DKK2 380 aaPredicted RBP16.58■□□□□ 0.25
COL6A2-202ENST00000310645 WASF1Q92558 559 aa16.58■□□□□ 0.25
COL6A2-202ENST00000310645 OVOS2A0A0G2JMS6 1433 aa16.58■□□□□ 0.25
COL6A2-202ENST00000310645 PBX1P40424 430 aa16.58■□□□□ 0.24
COL6A2-202ENST00000310645 CUL4BQ13620 913 aa16.58■□□□□ 0.24
COL6A2-202ENST00000310645 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.58■□□□□ 0.24
COL6A2-202ENST00000310645 PIH1D3Q9NQM4 214 aaKnown RBP16.58■□□□□ 0.24
COL6A2-202ENST00000310645 WDR19Q8NEZ3 1342 aa16.58■□□□□ 0.24
COL6A2-202ENST00000310645 LOC102724159A0A0B4J2E5 919 aa16.58■□□□□ 0.24
COL6A2-202ENST00000310645 CYP27B1O15528 508 aa16.58■□□□□ 0.24
COL6A2-202ENST00000310645 CIAO1O76071 339 aa16.58■□□□□ 0.24
COL6A2-202ENST00000310645 ADD2P35612 726 aa16.58■□□□□ 0.24
COL6A2-202ENST00000310645 TUBB4BP68371 445 aa16.58■□□□□ 0.24
COL6A2-202ENST00000310645 MRPS25P82663 173 aaKnown RBP16.58■□□□□ 0.24
COL6A2-202ENST00000310645 PWP2Q15269 919 aaKnown RBP16.58■□□□□ 0.24
COL6A2-202ENST00000310645 SYMPKQ92797 1274 aaKnown RBP16.58■□□□□ 0.24
COL6A2-202ENST00000310645 NAPBQ9H115 298 aa16.58■□□□□ 0.24
COL6A2-202ENST00000310645 EHD4Q9H223 541 aa16.58■□□□□ 0.24
COL6A2-202ENST00000310645 C5P01031 1676 aa16.58■□□□□ 0.24
COL6A2-202ENST00000310645 ATP1A1P05023 1023 aaKnown RBP16.57■□□□□ 0.24
COL6A2-202ENST00000310645 HPCAL4Q9UM19 191 aa16.57■□□□□ 0.24
COL6A2-202ENST00000310645 MYH8P13535 1937 aa16.57■□□□□ 0.24
COL6A2-202ENST00000310645 USP14P54578 494 aa16.57■□□□□ 0.24
COL6A2-202ENST00000310645 FKBP15Q5T1M5 1219 aa16.57■□□□□ 0.24
COL6A2-202ENST00000310645 CDKAL1Q5VV42 579 aa16.57■□□□□ 0.24
COL6A2-202ENST00000310645 SYNE4Q8N205 404 aa16.57■□□□□ 0.24
COL6A2-202ENST00000310645 CEP131Q9UPN4 1083 aa16.57■□□□□ 0.24
COL6A2-202ENST00000310645 EPN1Q9Y6I3 576 aaPredicted RBP16.57■□□□□ 0.24
COL6A2-202ENST00000310645 PPP1R3GB7ZBB8 358 aa16.57■□□□□ 0.24
COL6A2-202ENST00000310645 IFNAR1P17181 557 aa16.57■□□□□ 0.24
COL6A2-202ENST00000310645 UBXN1Q04323 297 aa16.57■□□□□ 0.24
COL6A2-202ENST00000310645 ZNF174Q15697 407 aa16.57■□□□□ 0.24
COL6A2-202ENST00000310645 CCDC122Q5T0U0 273 aa16.57■□□□□ 0.24
COL6A2-202ENST00000310645 TRIM75PA6NK02 468 aa16.56■□□□□ 0.24
COL6A2-202ENST00000310645 AMPD2Q01433 879 aa16.56■□□□□ 0.24
COL6A2-202ENST00000310645 IFIT5Q13325 482 aaKnown RBP16.56■□□□□ 0.24
COL6A2-202ENST00000310645 VPS54Q9P1Q0 977 aa16.56■□□□□ 0.24
COL6A2-202ENST00000310645 PRDM1O75626 825 aa16.56■□□□□ 0.24
COL6A2-202ENST00000310645 GUCY2CP25092 1073 aa16.56■□□□□ 0.24
COL6A2-202ENST00000310645 MAP9Q49MG5 647 aa16.56■□□□□ 0.24
COL6A2-202ENST00000310645 LDHAL6AQ6ZMR3 332 aa16.56■□□□□ 0.24
COL6A2-202ENST00000310645 TADA2BQ86TJ2 420 aa16.56■□□□□ 0.24
COL6A2-202ENST00000310645 TICAM2Q86XR7 235 aa16.56■□□□□ 0.24
COL6A2-202ENST00000310645 ELOA2Q8IYF1 753 aaPredicted RBP16.56■□□□□ 0.24
COL6A2-202ENST00000310645 CCDC51Q96ER9 411 aa16.56■□□□□ 0.24
COL6A2-202ENST00000310645 DCAF5Q96JK2 942 aa16.56■□□□□ 0.24
COL6A2-202ENST00000310645 STRN4Q9NRL3 753 aa16.56■□□□□ 0.24
COL6A2-202ENST00000310645 COPB1P53618 953 aaKnown RBP16.55■□□□□ 0.24
COL6A2-202ENST00000310645 CHRNA2Q15822 529 aa16.55■□□□□ 0.24
COL6A2-202ENST00000310645 WDR93Q6P2C0 686 aa16.55■□□□□ 0.24
COL6A2-202ENST00000310645 CTCFLQ8NI51 663 aaPredicted RBP16.55■□□□□ 0.24
COL6A2-202ENST00000310645 EEF2KMTQ96G04 330 aa16.55■□□□□ 0.24
COL6A2-202ENST00000310645 FOXP1Q9H334 677 aaPredicted RBP16.55■□□□□ 0.24
COL6A2-202ENST00000310645 GNL3LQ9NVN8 582 aaKnown RBP16.55■□□□□ 0.24
COL6A2-202ENST00000310645 SAR1BQ9Y6B6 198 aa16.55■□□□□ 0.24
COL6A2-202ENST00000310645 ZNF185O15231 689 aa16.55■□□□□ 0.24
COL6A2-202ENST00000310645 NDUFA10O95299 355 aa16.55■□□□□ 0.24
COL6A2-202ENST00000310645 TUBBP07437 444 aa16.55■□□□□ 0.24
COL6A2-202ENST00000310645 MYBL2P10244 700 aa16.55■□□□□ 0.24
COL6A2-202ENST00000310645 KIAA1328Q86T90 577 aa16.55■□□□□ 0.24
COL6A2-202ENST00000310645 ANKRD20A12PQ8NF67 263 aa16.55■□□□□ 0.24
COL6A2-202ENST00000310645 SPATA20Q8TB22 786 aa16.55■□□□□ 0.24
COL6A2-202ENST00000310645 KAT14Q9H8E8 782 aa16.55■□□□□ 0.24
COL6A2-202ENST00000310645 PDE6AP16499 860 aa16.55■□□□□ 0.24
COL6A2-202ENST00000310645 WTAPQ15007 396 aa16.55■□□□□ 0.24
COL6A2-202ENST00000310645 SGMS1Q86VZ5 419 aa16.55■□□□□ 0.24
COL6A2-202ENST00000310645 EFCAB13Q8IY85 973 aa16.55■□□□□ 0.24
COL6A2-202ENST00000310645 MSL3Q8N5Y2 521 aaKnown RBP16.55■□□□□ 0.24
COL6A2-202ENST00000310645 FAM76AQ8TAV0 307 aa16.55■□□□□ 0.24
COL6A2-202ENST00000310645 CNNM1Q9NRU3 951 aa16.55■□□□□ 0.24
COL6A2-202ENST00000310645 TBC1D2BQ9UPU7 963 aa16.55■□□□□ 0.24
COL6A2-202ENST00000310645 PRPF6O94906 941 aaKnown RBP16.54■□□□□ 0.24
COL6A2-202ENST00000310645 TSR1Q2NL82 804 aaKnown RBP16.54■□□□□ 0.24
COL6A2-202ENST00000310645 EARS2Q5JPH6 523 aaKnown RBP16.54■□□□□ 0.24
COL6A2-202ENST00000310645 ZNF579Q8NAF0 562 aaKnown RBP16.54■□□□□ 0.24
COL6A2-202ENST00000310645 COG1Q8WTW3 980 aa16.54■□□□□ 0.24
COL6A2-202ENST00000310645 REXO2Q9Y3B8 237 aaKnown RBP16.54■□□□□ 0.24
COL6A2-202ENST00000310645 GOLGA6CA6NDK9 693 aa16.54■□□□□ 0.24
COL6A2-202ENST00000310645 GOLGA6DP0CG33 693 aa16.54■□□□□ 0.24
COL6A2-202ENST00000310645 MATR3P43243 847 aaKnown RBP eCLIP16.54■□□□□ 0.24
COL6A2-202ENST00000310645 MFSD6Q6ZSS7 791 aa16.54■□□□□ 0.24
COL6A2-202ENST00000310645 HELBQ8NG08 1087 aaPredicted RBP16.54■□□□□ 0.24
COL6A2-202ENST00000310645 ARMT1Q9H993 441 aa16.54■□□□□ 0.24
COL6A2-202ENST00000310645 JADE2Q9NQC1 790 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms