RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 CCNT1O60563 726 aaKnown RBP14.97□□□□□ -0.01
CASC4-201ENST00000299957 MEX3CQ5U5Q3 659 aaKnown RBP14.97□□□□□ -0.01
CASC4-201ENST00000299957 TYW1BQ6NUM6 668 aa14.97□□□□□ -0.01
CASC4-201ENST00000299957 SHTN1A0MZ66 631 aa14.97□□□□□ -0.01
CASC4-201ENST00000299957 PLEKHA8P1O95397 391 aa14.97□□□□□ -0.01
CASC4-201ENST00000299957 NCAPH2Q6IBW4 605 aa14.97□□□□□ -0.01
CASC4-201ENST00000299957 HDXQ7Z353 690 aa14.97□□□□□ -0.01
CASC4-201ENST00000299957 NELFCDQ8IXH7 590 aa14.97□□□□□ -0.01
CASC4-201ENST00000299957 SMARCC2Q8TAQ2 1214 aa14.97□□□□□ -0.01
CASC4-201ENST00000299957 NRXN1Q9ULB1 1477 aa14.97□□□□□ -0.01
CASC4-201ENST00000299957 MYOM1P52179 1685 aa14.97□□□□□ -0.01
CASC4-201ENST00000299957 SH2B2O14492 632 aaPredicted RBP14.97□□□□□ -0.01
CASC4-201ENST00000299957 CXCR5P32302 372 aa14.97□□□□□ -0.01
CASC4-201ENST00000299957 PLS1Q14651 629 aa14.97□□□□□ -0.01
CASC4-201ENST00000299957 IQCEQ6IPM2 695 aa14.97□□□□□ -0.01
CASC4-201ENST00000299957 TERF2Q15554 542 aa14.96□□□□□ -0.01
CASC4-201ENST00000299957 TMEM266Q2M3C6 531 aa14.96□□□□□ -0.01
CASC4-201ENST00000299957 TTLL11Q8NHH1 800 aa14.96□□□□□ -0.01
CASC4-201ENST00000299957 SETDB2Q96T68 719 aa14.96□□□□□ -0.01
CASC4-201ENST00000299957 POLD4Q9HCU8 107 aa14.96□□□□□ -0.01
CASC4-201ENST00000299957 LUC7LQ9NQ29 371 aaKnown RBP14.96□□□□□ -0.01
CASC4-201ENST00000299957 SOS2Q07890 1332 aaPredicted RBP14.96□□□□□ -0.01
CASC4-201ENST00000299957 SSR1P43307 286 aaKnown RBP14.96□□□□□ -0.01
CASC4-201ENST00000299957 FOXO4P98177 505 aa14.96□□□□□ -0.01
CASC4-201ENST00000299957 NGLY1Q96IV0 654 aa14.96□□□□□ -0.01
CASC4-201ENST00000299957 RMND1Q9NWS8 449 aa14.96□□□□□ -0.01
CASC4-201ENST00000299957 KIDINS220Q9ULH0 1771 aa14.96□□□□□ -0.01
CASC4-201ENST00000299957 HPDP32754 393 aaPredicted RBP14.96□□□□□ -0.02
CASC4-201ENST00000299957 CTDP1Q9Y5B0 961 aaPredicted RBP14.96□□□□□ -0.02
CASC4-201ENST00000299957 PSDA5PKW4 1024 aaPredicted RBP14.95□□□□□ -0.02
CASC4-201ENST00000299957 HGSO14964 777 aaPredicted RBP14.95□□□□□ -0.02
CASC4-201ENST00000299957 PCCAP05165 728 aaPredicted RBP14.95□□□□□ -0.02
CASC4-201ENST00000299957 CERS3Q8IU89 383 aa14.95□□□□□ -0.02
CASC4-201ENST00000299957 TSG101Q99816 390 aa14.95□□□□□ -0.02
CASC4-201ENST00000299957 TRAF5O00463 557 aa14.95□□□□□ -0.02
CASC4-201ENST00000299957 SRGAP2O75044 1071 aa14.95□□□□□ -0.02
CASC4-201ENST00000299957 GNAT2P19087 354 aa14.95□□□□□ -0.02
CASC4-201ENST00000299957 LONRF2Q1L5Z9 754 aa14.95□□□□□ -0.02
CASC4-201ENST00000299957 VSTM4Q8IW00 320 aa14.95□□□□□ -0.02
CASC4-201ENST00000299957 PIGBQ92521 554 aa14.95□□□□□ -0.02
CASC4-201ENST00000299957 ALS2CR12Q96Q35 445 aa14.95□□□□□ -0.02
CASC4-201ENST00000299957 TRIM31Q9BZY9 425 aa14.95□□□□□ -0.02
CASC4-201ENST00000299957 GDAQ9Y2T3 454 aa14.95□□□□□ -0.02
CASC4-201ENST00000299957 KCNJ18B7U540 433 aa14.95□□□□□ -0.02
CASC4-201ENST00000299957 HNRNPH2P55795 449 aaKnown RBP14.95□□□□□ -0.02
CASC4-201ENST00000299957 EXOSC10Q01780 885 aaKnown RBP14.95□□□□□ -0.02
CASC4-201ENST00000299957 IFFO1Q0D2I5 559 aa14.95□□□□□ -0.02
CASC4-201ENST00000299957 KCNJ12Q14500 433 aa14.95□□□□□ -0.02
CASC4-201ENST00000299957 SND1Q7KZF4 910 aaKnown RBP eCLIP14.95□□□□□ -0.02
CASC4-201ENST00000299957 NLRP10Q86W26 655 aa14.95□□□□□ -0.02
CASC4-201ENST00000299957 RDXP35241 583 aaKnown RBP14.94□□□□□ -0.02
CASC4-201ENST00000299957 MNAT1P51948 309 aa14.94□□□□□ -0.02
CASC4-201ENST00000299957 CHRNDQ07001 517 aa14.94□□□□□ -0.02
CASC4-201ENST00000299957 UTP14CQ5TAP6 766 aaKnown RBP14.94□□□□□ -0.02
CASC4-201ENST00000299957 GIGYF2Q6Y7W6 1299 aaKnown RBP14.94□□□□□ -0.02
CASC4-201ENST00000299957 C2CD5Q86YS7 1000 aa14.94□□□□□ -0.02
CASC4-201ENST00000299957 TGFBRAP1Q8WUH2 860 aa14.94□□□□□ -0.02
CASC4-201ENST00000299957 JAKMIP2Q96AA8 810 aa14.94□□□□□ -0.02
CASC4-201ENST00000299957 OVOS2A0A0J9YW53 1432 aa14.94□□□□□ -0.02
CASC4-201ENST00000299957 OVOS2Q6IE36 1432 aa14.94□□□□□ -0.02
CASC4-201ENST00000299957 EFCAB8A8MWE9 144 aa14.94□□□□□ -0.02
CASC4-201ENST00000299957 TACC1O75410 805 aa14.94□□□□□ -0.02
CASC4-201ENST00000299957 CDC25BP30305 580 aa14.94□□□□□ -0.02
CASC4-201ENST00000299957 MORC3Q14149 939 aa14.94□□□□□ -0.02
CASC4-201ENST00000299957 PLCD4Q9BRC7 762 aa14.94□□□□□ -0.02
CASC4-201ENST00000299957 SLC39A2Q9NP94 309 aa14.94□□□□□ -0.02
CASC4-201ENST00000299957 TLDC2A0PJX2 215 aa14.94□□□□□ -0.02
CASC4-201ENST00000299957 BUB1O43683 1085 aa14.94□□□□□ -0.02
CASC4-201ENST00000299957 BAG3O95817 575 aa14.94□□□□□ -0.02
CASC4-201ENST00000299957 RAPGEF1Q13905 1077 aa14.94□□□□□ -0.02
CASC4-201ENST00000299957 SYCP1Q15431 976 aa14.94□□□□□ -0.02
CASC4-201ENST00000299957 CYP26C1Q6V0L0 522 aa14.94□□□□□ -0.02
CASC4-201ENST00000299957 KSR1Q8IVT5 923 aa14.94□□□□□ -0.02
CASC4-201ENST00000299957 MB21D2Q8IYB1 491 aaPredicted RBP14.94□□□□□ -0.02
CASC4-201ENST00000299957 STRBPQ96SI9 672 aaKnown RBP14.94□□□□□ -0.02
CASC4-201ENST00000299957 TRIM49BA6NDI0 452 aa14.93□□□□□ -0.02
CASC4-201ENST00000299957 TECP42680 631 aa14.93□□□□□ -0.02
CASC4-201ENST00000299957 FMR1Q06787 632 aaKnown RBP eCLIP14.93□□□□□ -0.02
CASC4-201ENST00000299957 SARM1Q6SZW1 724 aa14.93□□□□□ -0.02
CASC4-201ENST00000299957 RPGRQ92834 1020 aaKnown RBP14.93□□□□□ -0.02
CASC4-201ENST00000299957 BIN2Q9UBW5 565 aaPredicted RBP14.93□□□□□ -0.02
CASC4-201ENST00000299957 TFR2Q9UP52 801 aa14.93□□□□□ -0.02
CASC4-201ENST00000299957 FAN1Q9Y2M0 1017 aa14.93□□□□□ -0.02
CASC4-201ENST00000299957 POTEB2H3BUK9 544 aa14.93□□□□□ -0.02
CASC4-201ENST00000299957 ARID4AP29374 1257 aaPredicted RBP14.93□□□□□ -0.02
CASC4-201ENST00000299957 ANTXR2P58335 489 aa14.93□□□□□ -0.02
CASC4-201ENST00000299957 GSPT2Q8IYD1 628 aaKnown RBP14.93□□□□□ -0.02
CASC4-201ENST00000299957 GPR161Q8N6U8 529 aaKnown RBP14.93□□□□□ -0.02
CASC4-201ENST00000299957 GPR101Q96P66 508 aaPredicted RBP14.93□□□□□ -0.02
CASC4-201ENST00000299957 TFRCP02786 760 aaKnown RBP14.93□□□□□ -0.02
CASC4-201ENST00000299957 AMPD3Q01432 767 aa14.93□□□□□ -0.02
CASC4-201ENST00000299957 METTL16Q86W50 562 aaKnown RBP14.93□□□□□ -0.02
CASC4-201ENST00000299957 ZSCAN10Q96SZ4 725 aaPredicted RBP14.93□□□□□ -0.02
CASC4-201ENST00000299957 USP31Q70CQ4 1352 aa14.93□□□□□ -0.02
CASC4-201ENST00000299957 RTL9Q8NET4 1388 aa14.93□□□□□ -0.02
CASC4-201ENST00000299957 MROH7-TTC4A0A0A0MT08 1334 aa14.93□□□□□ -0.02
CASC4-201ENST00000299957 NRKQ7Z2Y5 1582 aa14.93□□□□□ -0.02
CASC4-201ENST00000299957 B4DLN1 442 aa14.92□□□□□ -0.02
CASC4-201ENST00000299957 BMP15O95972 392 aa14.92□□□□□ -0.02
CASC4-201ENST00000299957 MMP1P03956 469 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 175 ms