RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 PKP1Q13835 747 aa12.79□□□□□ -0.36
NPC1L1-201ENST00000289547 PRR5LQ6MZQ0 368 aa12.79□□□□□ -0.36
NPC1L1-201ENST00000289547 B4GALNT4Q76KP1 1039 aa12.79□□□□□ -0.36
NPC1L1-201ENST00000289547 ADGRB2O60241 1585 aa12.79□□□□□ -0.36
NPC1L1-201ENST00000289547 GPAA1O43292 621 aa12.79□□□□□ -0.36
NPC1L1-201ENST00000289547 PARP1P09874 1014 aaKnown RBP12.79□□□□□ -0.36
NPC1L1-201ENST00000289547 MTIF2P46199 727 aaKnown RBP12.79□□□□□ -0.36
NPC1L1-201ENST00000289547 IREB2P48200 963 aaKnown RBP12.79□□□□□ -0.36
NPC1L1-201ENST00000289547 RAB11FIP4Q86YS3 637 aa12.79□□□□□ -0.36
NPC1L1-201ENST00000289547 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.79□□□□□ -0.36
NPC1L1-201ENST00000289547 MEGF6O75095 1541 aa12.78□□□□□ -0.36
NPC1L1-201ENST00000289547 TMCO5BA8MYB1 307 aa12.78□□□□□ -0.36
NPC1L1-201ENST00000289547 C2orf69Q8N8R5 385 aa12.78□□□□□ -0.36
NPC1L1-201ENST00000289547 BAG1Q99933 345 aaPredicted RBP12.78□□□□□ -0.36
NPC1L1-201ENST00000289547 KLF18A0A0U1RQI7 1052 aa12.78□□□□□ -0.36
NPC1L1-201ENST00000289547 CPLX4Q7Z7G2 160 aa12.78□□□□□ -0.36
NPC1L1-201ENST00000289547 CHAMP1Q96JM3 812 aa12.78□□□□□ -0.36
NPC1L1-201ENST00000289547 GUCA1BQ9UMX6 200 aa12.78□□□□□ -0.36
NPC1L1-201ENST00000289547 TMED8Q6PL24 325 aaPredicted RBP12.78□□□□□ -0.36
NPC1L1-201ENST00000289547 FBF1Q8TES7 1133 aa12.78□□□□□ -0.36
NPC1L1-201ENST00000289547 RBM28Q9NW13 759 aaKnown RBP12.78□□□□□ -0.36
NPC1L1-201ENST00000289547 GSTTP1A0A1W2PQM5 241 aa12.78□□□□□ -0.36
NPC1L1-201ENST00000289547 PRC1O43663 620 aa12.78□□□□□ -0.36
NPC1L1-201ENST00000289547 MARCKSP29966 332 aaPredicted RBP12.78□□□□□ -0.36
NPC1L1-201ENST00000289547 CCDC6Q16204 474 aa12.78□□□□□ -0.36
NPC1L1-201ENST00000289547 BRDTQ58F21 947 aaPredicted RBP12.78□□□□□ -0.36
NPC1L1-201ENST00000289547 ARFGAP2Q8N6H7 521 aa12.78□□□□□ -0.36
NPC1L1-201ENST00000289547 CHRNA5P30532 468 aa12.77□□□□□ -0.36
NPC1L1-201ENST00000289547 COL23A1Q86Y22 540 aaPredicted RBP12.77□□□□□ -0.36
NPC1L1-201ENST00000289547 PNMA2Q9UL42 364 aa12.77□□□□□ -0.36
NPC1L1-201ENST00000289547 ECE2O60344 883 aa12.77□□□□□ -0.37
NPC1L1-201ENST00000289547 BRD1O95696 1058 aa12.77□□□□□ -0.37
NPC1L1-201ENST00000289547 CYLC1P35663 651 aaPredicted RBP12.77□□□□□ -0.37
NPC1L1-201ENST00000289547 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.77□□□□□ -0.37
NPC1L1-201ENST00000289547 CPA1P15085 419 aa12.77□□□□□ -0.37
NPC1L1-201ENST00000289547 SLC26A6Q9BXS9 759 aa12.77□□□□□ -0.37
NPC1L1-201ENST00000289547 PUS3Q9BZE2 481 aaKnown RBP12.77□□□□□ -0.37
NPC1L1-201ENST00000289547 C6orf50Q9HD87 102 aa12.77□□□□□ -0.37
NPC1L1-201ENST00000289547 SPDYE3A6NKU9 549 aa12.77□□□□□ -0.37
NPC1L1-201ENST00000289547 NBPF26B4DH59 902 aa12.77□□□□□ -0.37
NPC1L1-201ENST00000289547 NBPF10Q6P3W6 841 aaKnown RBP12.77□□□□□ -0.37
NPC1L1-201ENST00000289547 CCDC144CPQ8IYA2 1237 aa12.77□□□□□ -0.37
NPC1L1-201ENST00000289547 NBPF15Q8N660 670 aa12.77□□□□□ -0.37
NPC1L1-201ENST00000289547 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.76□□□□□ -0.37
NPC1L1-201ENST00000289547 TRIM21P19474 475 aaKnown RBP12.76□□□□□ -0.37
NPC1L1-201ENST00000289547 CHMLP26374 656 aa12.76□□□□□ -0.37
NPC1L1-201ENST00000289547 KANK3Q6NY19 840 aa12.76□□□□□ -0.37
NPC1L1-201ENST00000289547 ANKS4BQ8N8V4 417 aa12.76□□□□□ -0.37
NPC1L1-201ENST00000289547 ZNF277Q9NRM2 450 aaPredicted RBP12.76□□□□□ -0.37
NPC1L1-201ENST00000289547 TRMT2AQ8IZ69 625 aaKnown RBP12.76□□□□□ -0.37
NPC1L1-201ENST00000289547 NEBLO76041 1014 aa12.76□□□□□ -0.37
NPC1L1-201ENST00000289547 NAPAP54920 295 aa12.76□□□□□ -0.37
NPC1L1-201ENST00000289547 POTEAQ6S8J7 498 aa12.76□□□□□ -0.37
NPC1L1-201ENST00000289547 SPTLC2O15270 562 aa12.76□□□□□ -0.37
NPC1L1-201ENST00000289547 DTNBO60941 627 aa12.76□□□□□ -0.37
NPC1L1-201ENST00000289547 OTUD7AQ8TE49 926 aaPredicted RBP12.76□□□□□ -0.37
NPC1L1-201ENST00000289547 CTAGE1Q96RT6 745 aa12.76□□□□□ -0.37
NPC1L1-201ENST00000289547 CLSTN2Q9H4D0 955 aa12.76□□□□□ -0.37
NPC1L1-201ENST00000289547 GOLGA6CA6NDK9 693 aa12.75□□□□□ -0.37
NPC1L1-201ENST00000289547 GOLGA6DP0CG33 693 aa12.75□□□□□ -0.37
NPC1L1-201ENST00000289547 NOP2P46087 812 aaKnown RBP12.75□□□□□ -0.37
NPC1L1-201ENST00000289547 AOC3Q16853 763 aa12.75□□□□□ -0.37
NPC1L1-201ENST00000289547 CFAP58Q5T655 872 aa12.75□□□□□ -0.37
NPC1L1-201ENST00000289547 HEATR3Q7Z4Q2 680 aa12.75□□□□□ -0.37
NPC1L1-201ENST00000289547 ZNF34Q8IZ26 560 aa12.75□□□□□ -0.37
NPC1L1-201ENST00000289547 DNAI2Q9GZS0 605 aa12.75□□□□□ -0.37
NPC1L1-201ENST00000289547 GOLGA6AQ9NYA3 693 aa12.75□□□□□ -0.37
NPC1L1-201ENST00000289547 DPEP1P16444 411 aa12.75□□□□□ -0.37
NPC1L1-201ENST00000289547 PHKA1P46020 1223 aa12.75□□□□□ -0.37
NPC1L1-201ENST00000289547 PRPF4BQ13523 1007 aaKnown RBP12.75□□□□□ -0.37
NPC1L1-201ENST00000289547 VAV2P52735 878 aa12.75□□□□□ -0.37
NPC1L1-201ENST00000289547 APOBEC3FQ8IUX4 373 aaKnown RBP12.75□□□□□ -0.37
NPC1L1-201ENST00000289547 GOLGA5Q8TBA6 731 aa12.75□□□□□ -0.37
NPC1L1-201ENST00000289547 GLT8D2Q9H1C3 349 aa12.75□□□□□ -0.37
NPC1L1-201ENST00000289547 DHX36Q9H2U1 1008 aaKnown RBP12.75□□□□□ -0.37
NPC1L1-201ENST00000289547 SAMM50Q9Y512 469 aa12.75□□□□□ -0.37
NPC1L1-201ENST00000289547 KNDC1Q76NI1 1749 aa12.75□□□□□ -0.37
NPC1L1-201ENST00000289547 CLRN2A0PK11 232 aa12.74□□□□□ -0.37
NPC1L1-201ENST00000289547 TMEM87BQ96K49 555 aa12.74□□□□□ -0.37
NPC1L1-201ENST00000289547 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.74□□□□□ -0.37
NPC1L1-201ENST00000289547 SWAP70Q9UH65 585 aa12.74□□□□□ -0.37
NPC1L1-201ENST00000289547 MINPP1Q9UNW1 487 aa12.74□□□□□ -0.37
NPC1L1-201ENST00000289547 KIF20BQ96Q89 1820 aa12.74□□□□□ -0.37
NPC1L1-201ENST00000289547 KRT86O43790 486 aa12.74□□□□□ -0.37
NPC1L1-201ENST00000289547 TACC1O75410 805 aa12.74□□□□□ -0.37
NPC1L1-201ENST00000289547 CALML3P27482 149 aa12.74□□□□□ -0.37
NPC1L1-201ENST00000289547 VPS36Q86VN1 386 aa12.74□□□□□ -0.37
NPC1L1-201ENST00000289547 NSRP1Q9H0G5 558 aaKnown RBP12.74□□□□□ -0.37
NPC1L1-201ENST00000289547 GPBP1L1Q9HC44 474 aaPredicted RBP12.74□□□□□ -0.37
NPC1L1-201ENST00000289547 ZNRF3Q9ULT6 936 aa12.74□□□□□ -0.37
NPC1L1-201ENST00000289547 SLC1A4P43007 532 aa12.74□□□□□ -0.37
NPC1L1-201ENST00000289547 AFMP43652 599 aa12.74□□□□□ -0.37
NPC1L1-201ENST00000289547 RRP15Q9Y3B9 282 aaKnown RBP12.74□□□□□ -0.37
NPC1L1-201ENST00000289547 CEMIPQ8WUJ3 1361 aa12.74□□□□□ -0.37
NPC1L1-201ENST00000289547 A0A1B0GVL5 298 aa12.74□□□□□ -0.37
NPC1L1-201ENST00000289547 GNA11P29992 359 aa12.74□□□□□ -0.37
NPC1L1-201ENST00000289547 LIG3P49916 1009 aa12.74□□□□□ -0.37
NPC1L1-201ENST00000289547 USP14P54578 494 aa12.74□□□□□ -0.37
NPC1L1-201ENST00000289547 MYL5Q02045 173 aa12.74□□□□□ -0.37
NPC1L1-201ENST00000289547 CERKLQ49MI3 558 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms