RNA–Protein interactions for RNA: ENST00000289175.10

LRRFIP1-202, Transcript of LRR binding FLII interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-202ENST00000289175 C12orf60Q5U649 245 aa16.34■□□□□ 0.21
LRRFIP1-202ENST00000289175 NAPAP54920 295 aa16.34■□□□□ 0.21
LRRFIP1-202ENST00000289175 CDC37L1Q7L3B6 337 aa16.34■□□□□ 0.21
LRRFIP1-202ENST00000289175 RNF214Q8ND24 703 aa16.34■□□□□ 0.21
LRRFIP1-202ENST00000289175 CNPY2Q9Y2B0 182 aa16.34■□□□□ 0.21
LRRFIP1-202ENST00000289175 GPR75-ASB3A0A0A6YYF3 556 aa16.33■□□□□ 0.21
LRRFIP1-202ENST00000289175 SYT1P21579 422 aa16.33■□□□□ 0.21
LRRFIP1-202ENST00000289175 RHBDL3P58872 404 aa16.33■□□□□ 0.21
LRRFIP1-202ENST00000289175 CNNM2Q9H8M5 875 aa16.33■□□□□ 0.21
LRRFIP1-202ENST00000289175 ZBTB21Q9ULJ3 1066 aa16.33■□□□□ 0.21
LRRFIP1-202ENST00000289175 SLFN13Q68D06 897 aa16.33■□□□□ 0.2
LRRFIP1-202ENST00000289175 APOA5Q6Q788 366 aa16.33■□□□□ 0.2
LRRFIP1-202ENST00000289175 TNPO1Q92973 898 aaKnown RBP16.33■□□□□ 0.2
LRRFIP1-202ENST00000289175 TMEM47Q9BQJ4 181 aa16.33■□□□□ 0.2
LRRFIP1-202ENST00000289175 CEP290O15078 2479 aa16.33■□□□□ 0.2
LRRFIP1-202ENST00000289175 ARFGEF2Q9Y6D5 1785 aa16.33■□□□□ 0.2
LRRFIP1-202ENST00000289175 FOXP2O15409 715 aa16.33■□□□□ 0.2
LRRFIP1-202ENST00000289175 PARP1P09874 1014 aaKnown RBP16.33■□□□□ 0.2
LRRFIP1-202ENST00000289175 ALAS1P13196 640 aa16.33■□□□□ 0.2
LRRFIP1-202ENST00000289175 HOXA13P31271 388 aaPredicted RBP16.33■□□□□ 0.2
LRRFIP1-202ENST00000289175 FAM83BQ5T0W9 1011 aa16.33■□□□□ 0.2
LRRFIP1-202ENST00000289175 SMCR8Q8TEV9 937 aaPredicted RBP16.33■□□□□ 0.2
LRRFIP1-202ENST00000289175 NOC3LQ8WTT2 800 aaKnown RBP16.33■□□□□ 0.2
LRRFIP1-202ENST00000289175 ZSWIM6Q9HCJ5 1215 aa16.33■□□□□ 0.2
LRRFIP1-202ENST00000289175 BMP2KQ9NSY1 1161 aaPredicted RBP16.33■□□□□ 0.2
LRRFIP1-202ENST00000289175 TSKSQ9UJT2 592 aa16.32■□□□□ 0.2
LRRFIP1-202ENST00000289175 THSD7AQ9UPZ6 1657 aa16.32■□□□□ 0.2
LRRFIP1-202ENST00000289175 MTMR2Q13614 643 aa16.32■□□□□ 0.2
LRRFIP1-202ENST00000289175 SLC30A10Q6XR72 485 aa16.32■□□□□ 0.2
LRRFIP1-202ENST00000289175 BIN2Q9UBW5 565 aaPredicted RBP16.32■□□□□ 0.2
LRRFIP1-202ENST00000289175 HMGB1P09429 215 aaKnown RBP16.32■□□□□ 0.2
LRRFIP1-202ENST00000289175 ZNF76P36508 570 aa16.32■□□□□ 0.2
LRRFIP1-202ENST00000289175 ZHX3Q9H4I2 956 aa16.32■□□□□ 0.2
LRRFIP1-202ENST00000289175 RBM27Q9P2N5 1060 aaKnown RBP16.32■□□□□ 0.2
LRRFIP1-202ENST00000289175 DDX39AO00148 427 aaKnown RBP16.31■□□□□ 0.2
LRRFIP1-202ENST00000289175 STX6O43752 255 aa16.31■□□□□ 0.2
LRRFIP1-202ENST00000289175 HIRAP54198 1017 aaPredicted RBP16.31■□□□□ 0.2
LRRFIP1-202ENST00000289175 NR5A1Q13285 461 aa16.31■□□□□ 0.2
LRRFIP1-202ENST00000289175 PIGSQ96S52 555 aa16.31■□□□□ 0.2
LRRFIP1-202ENST00000289175 GPRC5DQ9NZD1 345 aa16.31■□□□□ 0.2
LRRFIP1-202ENST00000289175 YY1P25490 414 aa16.31■□□□□ 0.2
LRRFIP1-202ENST00000289175 TNFAIP1Q13829 316 aa16.31■□□□□ 0.2
LRRFIP1-202ENST00000289175 STK38Q15208 465 aa16.31■□□□□ 0.2
LRRFIP1-202ENST00000289175 FANCBQ8NB91 859 aa16.31■□□□□ 0.2
LRRFIP1-202ENST00000289175 NBPF3Q9H094 633 aa16.31■□□□□ 0.2
LRRFIP1-202ENST00000289175 CDC25AP30304 524 aa16.31■□□□□ 0.2
LRRFIP1-202ENST00000289175 CAVIN1Q6NZI2 390 aaKnown RBP16.31■□□□□ 0.2
LRRFIP1-202ENST00000289175 NBPF11Q86T75 865 aa16.31■□□□□ 0.2
LRRFIP1-202ENST00000289175 MKRN1Q9UHC7 482 aaKnown RBP16.31■□□□□ 0.2
LRRFIP1-202ENST00000289175 RASA1P20936 1047 aa16.3■□□□□ 0.2
LRRFIP1-202ENST00000289175 PSMD1Q99460 953 aa16.3■□□□□ 0.2
LRRFIP1-202ENST00000289175 POLD4Q9HCU8 107 aa16.3■□□□□ 0.2
LRRFIP1-202ENST00000289175 GJA10Q969M2 543 aa16.3■□□□□ 0.2
LRRFIP1-202ENST00000289175 SLC10A4Q96EP9 437 aa16.3■□□□□ 0.2
LRRFIP1-202ENST00000289175 VIRMAQ69YN4 1812 aaKnown RBP16.3■□□□□ 0.2
LRRFIP1-202ENST00000289175 KLRG2A4D1S0 409 aaPredicted RBP16.3■□□□□ 0.2
LRRFIP1-202ENST00000289175 HUNKP57058 714 aa16.3■□□□□ 0.2
LRRFIP1-202ENST00000289175 ZNF174Q15697 407 aa16.3■□□□□ 0.2
LRRFIP1-202ENST00000289175 BTBD18B2RXH4 712 aa16.29■□□□□ 0.2
LRRFIP1-202ENST00000289175 VIL1P09327 827 aaKnown RBP16.29■□□□□ 0.2
LRRFIP1-202ENST00000289175 CALML3P27482 149 aa16.29■□□□□ 0.2
LRRFIP1-202ENST00000289175 UBE2SQ16763 222 aa16.29■□□□□ 0.2
LRRFIP1-202ENST00000289175 GBP4Q96PP9 640 aa16.29■□□□□ 0.2
LRRFIP1-202ENST00000289175 USP17L10C9JJH3 530 aa16.29■□□□□ 0.2
LRRFIP1-202ENST00000289175 STAMQ92783 540 aa16.29■□□□□ 0.2
LRRFIP1-202ENST00000289175 PLEKHG2Q9H7P9 1386 aa16.29■□□□□ 0.2
LRRFIP1-202ENST00000289175 MCM7P33993 719 aa16.29■□□□□ 0.2
LRRFIP1-202ENST00000289175 PIK3AP1Q6ZUJ8 805 aa16.29■□□□□ 0.2
LRRFIP1-202ENST00000289175 SH3BP5LQ7L8J4 393 aa16.29■□□□□ 0.2
LRRFIP1-202ENST00000289175 RTEL1Q9NZ71 1219 aa16.29■□□□□ 0.2
LRRFIP1-202ENST00000289175 TCEAL9Q9UHQ7 104 aa16.29■□□□□ 0.2
LRRFIP1-202ENST00000289175 MRVI1Q9Y6F6 885 aa16.29■□□□□ 0.2
LRRFIP1-202ENST00000289175 USP54Q70EL1 1684 aa16.28■□□□□ 0.2
LRRFIP1-202ENST00000289175 TJP1Q07157 1748 aa16.28■□□□□ 0.2
LRRFIP1-202ENST00000289175 MYCLP12524 364 aaPredicted RBP16.28■□□□□ 0.2
LRRFIP1-202ENST00000289175 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.28■□□□□ 0.2
LRRFIP1-202ENST00000289175 KIF3AQ9Y496 699 aa16.28■□□□□ 0.2
LRRFIP1-202ENST00000289175 F5H6K3 240 aa16.28■□□□□ 0.2
LRRFIP1-202ENST00000289175 JAG1P78504 1218 aa16.28■□□□□ 0.2
LRRFIP1-202ENST00000289175 KLRC3Q07444 240 aa16.28■□□□□ 0.2
LRRFIP1-202ENST00000289175 ZDHHC15Q96MV8 337 aa16.28■□□□□ 0.2
LRRFIP1-202ENST00000289175 FAM205CA6NFA0 338 aa16.27■□□□□ 0.2
LRRFIP1-202ENST00000289175 CHMP2AO43633 222 aa16.27■□□□□ 0.2
LRRFIP1-202ENST00000289175 LETM2Q2VYF4 491 aa16.27■□□□□ 0.2
LRRFIP1-202ENST00000289175 SLX4Q8IY92 1834 aa16.27■□□□□ 0.2
LRRFIP1-202ENST00000289175 SGIP1Q9BQI5 828 aa16.27■□□□□ 0.19
LRRFIP1-202ENST00000289175 MB21D2Q8IYB1 491 aaPredicted RBP16.27■□□□□ 0.19
LRRFIP1-202ENST00000289175 ZSCAN31Q96LW9 406 aaPredicted RBP16.27■□□□□ 0.19
LRRFIP1-202ENST00000289175 SERPINA10Q9UK55 444 aa16.27■□□□□ 0.19
LRRFIP1-202ENST00000289175 ANAPC15P60006 121 aa16.26■□□□□ 0.19
LRRFIP1-202ENST00000289175 HSP90AA4PQ58FG1 418 aa16.26■□□□□ 0.19
LRRFIP1-202ENST00000289175 RAVER2Q9HCJ3 691 aaKnown RBP16.26■□□□□ 0.19
LRRFIP1-202ENST00000289175 USP17L15C9J2P7 530 aa16.26■□□□□ 0.19
LRRFIP1-202ENST00000289175 USP17L13C9JLJ4 530 aa16.26■□□□□ 0.19
LRRFIP1-202ENST00000289175 USP17L11C9JVI0 530 aa16.26■□□□□ 0.19
LRRFIP1-202ENST00000289175 USP17L18D6R9N7 530 aa16.26■□□□□ 0.19
LRRFIP1-202ENST00000289175 USP17L22D6RA61 530 aa16.26■□□□□ 0.19
LRRFIP1-202ENST00000289175 USP17L17D6RBQ6 530 aa16.26■□□□□ 0.19
LRRFIP1-202ENST00000289175 USP17L19D6RCP7 530 aa16.26■□□□□ 0.19
LRRFIP1-202ENST00000289175 USP17L20D6RJB6 530 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms