RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 CCDC47Q96A33 483 aaKnown RBP13.48□□□□□ -0.25
SLC13A3-201ENST00000279027 MAGEC2Q9UBF1 373 aaPredicted RBP13.48□□□□□ -0.25
SLC13A3-201ENST00000279027 TACC3Q9Y6A5 838 aa13.48□□□□□ -0.25
SLC13A3-201ENST00000279027 MARF1Q9Y4F3 1742 aaKnown RBP13.48□□□□□ -0.25
SLC13A3-201ENST00000279027 ZNF804AQ7Z570 1209 aa13.48□□□□□ -0.25
SLC13A3-201ENST00000279027 ZMYND15Q9H091 742 aa13.48□□□□□ -0.25
SLC13A3-201ENST00000279027 GPCPD1Q9NPB8 672 aa13.48□□□□□ -0.25
SLC13A3-201ENST00000279027 RNF216Q9NWF9 866 aaPredicted RBP13.48□□□□□ -0.25
SLC13A3-201ENST00000279027 ZHX1Q9UKY1 873 aaPredicted RBP13.48□□□□□ -0.25
SLC13A3-201ENST00000279027 LDHCP07864 332 aa13.48□□□□□ -0.25
SLC13A3-201ENST00000279027 CALM1P0DP23 149 aa13.48□□□□□ -0.25
SLC13A3-201ENST00000279027 CALM2P0DP24 149 aa13.48□□□□□ -0.25
SLC13A3-201ENST00000279027 CALM3P0DP25 149 aa13.48□□□□□ -0.25
SLC13A3-201ENST00000279027 ALX1Q15699 326 aa13.48□□□□□ -0.25
SLC13A3-201ENST00000279027 ARHGAP29Q52LW3 1261 aa13.48□□□□□ -0.25
SLC13A3-201ENST00000279027 RESP18Q5W5W9 173 aa13.48□□□□□ -0.25
SLC13A3-201ENST00000279027 KANK3Q6NY19 840 aa13.48□□□□□ -0.25
SLC13A3-201ENST00000279027 DCP1AQ9NPI6 582 aaPredicted RBP13.48□□□□□ -0.25
SLC13A3-201ENST00000279027 RBM43Q6ZSC3 357 aaKnown RBP13.47□□□□□ -0.25
SLC13A3-201ENST00000279027 BAG1Q99933 345 aaPredicted RBP13.47□□□□□ -0.25
SLC13A3-201ENST00000279027 SPTLC3Q9NUV7 552 aa13.47□□□□□ -0.25
SLC13A3-201ENST00000279027 RBM28Q9NW13 759 aaKnown RBP13.47□□□□□ -0.25
SLC13A3-201ENST00000279027 JCADQ9P266 1359 aa13.47□□□□□ -0.25
SLC13A3-201ENST00000279027 GTF2IP78347 998 aa13.47□□□□□ -0.25
SLC13A3-201ENST00000279027 NFIXQ14938 502 aa13.47□□□□□ -0.25
SLC13A3-201ENST00000279027 SH3RF3Q8TEJ3 882 aaPredicted RBP13.47□□□□□ -0.25
SLC13A3-201ENST00000279027 CCDC12Q8WUD4 166 aaPredicted RBP13.47□□□□□ -0.25
SLC13A3-201ENST00000279027 ZSCAN12O43309 604 aa13.47□□□□□ -0.25
SLC13A3-201ENST00000279027 CASQ1P31415 396 aa13.47□□□□□ -0.25
SLC13A3-201ENST00000279027 ENOX2Q16206 610 aaKnown RBP13.47□□□□□ -0.25
SLC13A3-201ENST00000279027 MFSD14BQ5SR56 506 aa13.47□□□□□ -0.25
SLC13A3-201ENST00000279027 FOXP1Q9H334 677 aaPredicted RBP13.47□□□□□ -0.25
SLC13A3-201ENST00000279027 TAB2Q9NYJ8 693 aa13.47□□□□□ -0.25
SLC13A3-201ENST00000279027 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.46□□□□□ -0.25
SLC13A3-201ENST00000279027 SLU7O95391 586 aaKnown RBP13.46□□□□□ -0.25
SLC13A3-201ENST00000279027 SCG2P13521 617 aa13.46□□□□□ -0.25
SLC13A3-201ENST00000279027 IQUBQ8NA54 791 aa13.46□□□□□ -0.25
SLC13A3-201ENST00000279027 FRMPD2Q68DX3 1309 aaPredicted RBP13.46□□□□□ -0.25
SLC13A3-201ENST00000279027 TOB1P50616 345 aaPredicted RBP13.46□□□□□ -0.25
SLC13A3-201ENST00000279027 SCNN1DP51172 638 aa13.46□□□□□ -0.25
SLC13A3-201ENST00000279027 ARMCX5Q6P1M9 558 aa13.46□□□□□ -0.25
SLC13A3-201ENST00000279027 STAG2Q8N3U4 1231 aa13.46□□□□□ -0.25
SLC13A3-201ENST00000279027 ZNF512BQ96KM6 892 aaPredicted RBP13.46□□□□□ -0.25
SLC13A3-201ENST00000279027 TRIM47Q96LD4 638 aa13.46□□□□□ -0.25
SLC13A3-201ENST00000279027 RNF26Q9BY78 433 aaPredicted RBP13.46□□□□□ -0.25
SLC13A3-201ENST00000279027 TANGO6Q9C0B7 1094 aa13.46□□□□□ -0.25
SLC13A3-201ENST00000279027 PTPREP23469 700 aa13.46□□□□□ -0.26
SLC13A3-201ENST00000279027 ERCC6LQ2NKX8 1250 aa13.46□□□□□ -0.26
SLC13A3-201ENST00000279027 EARS2Q5JPH6 523 aaKnown RBP13.46□□□□□ -0.26
SLC13A3-201ENST00000279027 IGSF22Q8N9C0 903 aa13.46□□□□□ -0.26
SLC13A3-201ENST00000279027 NSUN4Q96CB9 384 aaKnown RBP13.46□□□□□ -0.26
SLC13A3-201ENST00000279027 EVCP57679 992 aa13.45□□□□□ -0.26
SLC13A3-201ENST00000279027 ST5P78524 1137 aa13.45□□□□□ -0.26
SLC13A3-201ENST00000279027 PTPAQ15257 358 aa13.45□□□□□ -0.26
SLC13A3-201ENST00000279027 DOK7Q18PE1 504 aa13.45□□□□□ -0.26
SLC13A3-201ENST00000279027 KIF4BQ2VIQ3 1234 aa13.45□□□□□ -0.26
SLC13A3-201ENST00000279027 SARM1Q6SZW1 724 aa13.45□□□□□ -0.26
SLC13A3-201ENST00000279027 DTHD1Q6ZMT9 781 aa13.45□□□□□ -0.26
SLC13A3-201ENST00000279027 MRC1P22897 1456 aa13.45□□□□□ -0.26
SLC13A3-201ENST00000279027 CCP110O43303 1012 aa13.45□□□□□ -0.26
SLC13A3-201ENST00000279027 VEGFAP15692 232 aaPredicted RBP13.45□□□□□ -0.26
SLC13A3-201ENST00000279027 SRBD1Q8N5C6 995 aaKnown RBP13.45□□□□□ -0.26
SLC13A3-201ENST00000279027 IPO7O95373 1038 aaKnown RBP13.45□□□□□ -0.26
SLC13A3-201ENST00000279027 BTDP43251 543 aa13.45□□□□□ -0.26
SLC13A3-201ENST00000279027 NAP1L1P55209 391 aaKnown RBP13.45□□□□□ -0.26
SLC13A3-201ENST00000279027 FMR1Q06787 632 aaKnown RBP eCLIP13.45□□□□□ -0.26
SLC13A3-201ENST00000279027 USP17L2Q6R6M4 530 aa13.45□□□□□ -0.26
SLC13A3-201ENST00000279027 CLEC4GQ6UXB4 293 aa13.45□□□□□ -0.26
SLC13A3-201ENST00000279027 TRMT1LQ7Z2T5 733 aaKnown RBP13.45□□□□□ -0.26
SLC13A3-201ENST00000279027 FOXP4Q8IVH2 680 aaPredicted RBP13.45□□□□□ -0.26
SLC13A3-201ENST00000279027 LRRC47Q8N1G4 583 aaKnown RBP13.45□□□□□ -0.26
SLC13A3-201ENST00000279027 MLKLQ8NB16 471 aa13.45□□□□□ -0.26
SLC13A3-201ENST00000279027 PPP1R13BQ96KQ4 1090 aa13.45□□□□□ -0.26
SLC13A3-201ENST00000279027 SYNRGQ9UMZ2 1314 aa13.45□□□□□ -0.26
SLC13A3-201ENST00000279027 PP2D1A8MPX8 630 aa13.44□□□□□ -0.26
SLC13A3-201ENST00000279027 TNNI2P48788 182 aa13.44□□□□□ -0.26
SLC13A3-201ENST00000279027 TCP10Q12799 353 aa13.44□□□□□ -0.26
SLC13A3-201ENST00000279027 STIM1Q13586 685 aa13.44□□□□□ -0.26
SLC13A3-201ENST00000279027 CCDC94Q9BW85 323 aaPredicted RBP13.44□□□□□ -0.26
SLC13A3-201ENST00000279027 CARD6Q9BX69 1037 aa13.44□□□□□ -0.26
SLC13A3-201ENST00000279027 TCP11L1Q9NUJ3 509 aa13.44□□□□□ -0.26
SLC13A3-201ENST00000279027 BIN2Q9UBW5 565 aaPredicted RBP13.44□□□□□ -0.26
SLC13A3-201ENST00000279027 GGA1Q9UJY5 639 aa13.44□□□□□ -0.26
SLC13A3-201ENST00000279027 CCNT1O60563 726 aaKnown RBP13.44□□□□□ -0.26
SLC13A3-201ENST00000279027 ASIC1P78348 528 aa13.44□□□□□ -0.26
SLC13A3-201ENST00000279027 MSL1Q68DK7 614 aa13.44□□□□□ -0.26
SLC13A3-201ENST00000279027 RASGRP2Q7LDG7 609 aa13.44□□□□□ -0.26
SLC13A3-201ENST00000279027 WDR66Q8TBY9 1149 aa13.44□□□□□ -0.26
SLC13A3-201ENST00000279027 NARFQ9UHQ1 456 aa13.44□□□□□ -0.26
SLC13A3-201ENST00000279027 TXKP42681 527 aa13.44□□□□□ -0.26
SLC13A3-201ENST00000279027 PUF60Q9UHX1 559 aaKnown RBP13.44□□□□□ -0.26
SLC13A3-201ENST00000279027 ADAMTSL3P82987 1691 aa13.44□□□□□ -0.26
SLC13A3-201ENST00000279027 RPS6KA4O75676 772 aa13.43□□□□□ -0.26
SLC13A3-201ENST00000279027 CDC25BP30305 580 aa13.43□□□□□ -0.26
SLC13A3-201ENST00000279027 GSTO1P78417 241 aa13.43□□□□□ -0.26
SLC13A3-201ENST00000279027 CCZ1BP86790 482 aa13.43□□□□□ -0.26
SLC13A3-201ENST00000279027 CCZ1P86791 482 aaPredicted RBP13.43□□□□□ -0.26
SLC13A3-201ENST00000279027 BLIDQ8IZY5 108 aa13.43□□□□□ -0.26
SLC13A3-201ENST00000279027 EYA3Q99504 573 aa13.43□□□□□ -0.26
SLC13A3-201ENST00000279027 IMPACTQ9P2X3 320 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms