RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 MMP1P03956 469 aa16.92■□□□□ 0.3
XRCC1-201ENST00000262887 GSCP56915 257 aaPredicted RBP16.92■□□□□ 0.3
XRCC1-201ENST00000262887 CDKAL1Q5VV42 579 aa16.92■□□□□ 0.3
XRCC1-201ENST00000262887 ZNF579Q8NAF0 562 aaKnown RBP16.92■□□□□ 0.3
XRCC1-201ENST00000262887 RAPGEF4Q8WZA2 1011 aa16.92■□□□□ 0.3
XRCC1-201ENST00000262887 TMEM87BQ96K49 555 aa16.92■□□□□ 0.3
XRCC1-201ENST00000262887 EXOC5O00471 708 aa16.92■□□□□ 0.3
XRCC1-201ENST00000262887 CD44P16070 742 aaKnown RBP16.92■□□□□ 0.3
XRCC1-201ENST00000262887 LMOD2Q6P5Q4 547 aa16.92■□□□□ 0.3
XRCC1-201ENST00000262887 PI16Q6UXB8 463 aa16.92■□□□□ 0.3
XRCC1-201ENST00000262887 USP49Q70CQ1 688 aa16.92■□□□□ 0.3
XRCC1-201ENST00000262887 COG1Q8WTW3 980 aa16.92■□□□□ 0.3
XRCC1-201ENST00000262887 WASF1Q92558 559 aa16.92■□□□□ 0.3
XRCC1-201ENST00000262887 FAM217BQ9NTX9 383 aaPredicted RBP16.92■□□□□ 0.3
XRCC1-201ENST00000262887 ABHD10Q9NUJ1 306 aa16.92■□□□□ 0.3
XRCC1-201ENST00000262887 KCNJ14Q9UNX9 436 aa16.92■□□□□ 0.3
XRCC1-201ENST00000262887 PCDHB6Q9Y5E3 794 aa16.92■□□□□ 0.3
XRCC1-201ENST00000262887 STK36Q9NRP7 1315 aa16.91■□□□□ 0.3
XRCC1-201ENST00000262887 CCT6AP40227 531 aaKnown RBP16.91■□□□□ 0.3
XRCC1-201ENST00000262887 AFMP43652 599 aa16.91■□□□□ 0.3
XRCC1-201ENST00000262887 TMEM67Q5HYA8 995 aa16.91■□□□□ 0.3
XRCC1-201ENST00000262887 CYP26C1Q6V0L0 522 aa16.91■□□□□ 0.3
XRCC1-201ENST00000262887 RIN2Q8WYP3 895 aaPredicted RBP16.91■□□□□ 0.3
XRCC1-201ENST00000262887 SRPRBQ9Y5M8 271 aaKnown RBP16.91■□□□□ 0.3
XRCC1-201ENST00000262887 TMEM94Q12767 1356 aa16.91■□□□□ 0.3
XRCC1-201ENST00000262887 ITIH6Q6UXX5 1313 aa16.91■□□□□ 0.3
XRCC1-201ENST00000262887 ZC3H4Q9UPT8 1303 aaKnown RBP16.91■□□□□ 0.3
XRCC1-201ENST00000262887 SLF1Q9BQI6 1058 aa16.91■□□□□ 0.3
XRCC1-201ENST00000262887 CSRNP2Q9H175 543 aa16.91■□□□□ 0.3
XRCC1-201ENST00000262887 FMNL1O95466 1100 aaPredicted RBP16.9■□□□□ 0.3
XRCC1-201ENST00000262887 PHKG2P15735 406 aa16.9■□□□□ 0.3
XRCC1-201ENST00000262887 GGCXP38435 758 aa16.9■□□□□ 0.3
XRCC1-201ENST00000262887 CCT5P48643 541 aa16.9■□□□□ 0.3
XRCC1-201ENST00000262887 LIG3P49916 1009 aa16.9■□□□□ 0.3
XRCC1-201ENST00000262887 CUL4BQ13620 913 aa16.9■□□□□ 0.3
XRCC1-201ENST00000262887 FAM76AQ8TAV0 307 aa16.9■□□□□ 0.3
XRCC1-201ENST00000262887 IGDCC4Q8TDY8 1250 aa16.9■□□□□ 0.3
XRCC1-201ENST00000262887 NUP88Q99567 741 aaPredicted RBP16.9■□□□□ 0.3
XRCC1-201ENST00000262887 CRACR2AQ9BSW2 395 aa16.9■□□□□ 0.3
XRCC1-201ENST00000262887 LY9Q9HBG7 655 aa16.9■□□□□ 0.3
XRCC1-201ENST00000262887 EBAG9O00559 213 aa16.9■□□□□ 0.3
XRCC1-201ENST00000262887 SEMA3EO15041 775 aa16.9■□□□□ 0.3
XRCC1-201ENST00000262887 GUCY1A2P33402 732 aa16.9■□□□□ 0.3
XRCC1-201ENST00000262887 TRAPPC11Q7Z392 1133 aa16.9■□□□□ 0.3
XRCC1-201ENST00000262887 SMYD4Q8IYR2 804 aaPredicted RBP16.9■□□□□ 0.3
XRCC1-201ENST00000262887 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.9■□□□□ 0.32e-8■■■■□ 25.6
XRCC1-201ENST00000262887 CEP131Q9UPN4 1083 aa16.9■□□□□ 0.3
XRCC1-201ENST00000262887 SLC12A7Q9Y666 1083 aa16.9■□□□□ 0.3
XRCC1-201ENST00000262887 SGMS1Q86VZ5 419 aa16.89■□□□□ 0.29
XRCC1-201ENST00000262887 KAT2BQ92831 832 aa16.89■□□□□ 0.29
XRCC1-201ENST00000262887 GUCA1BQ9UMX6 200 aa16.89■□□□□ 0.29
XRCC1-201ENST00000262887 FAM169AQ9Y6X4 670 aa16.89■□□□□ 0.29
XRCC1-201ENST00000262887 CASP1P29466 404 aa16.89■□□□□ 0.29
XRCC1-201ENST00000262887 FOXP1Q9H334 677 aaPredicted RBP16.89■□□□□ 0.29
XRCC1-201ENST00000262887 KAT14Q9H8E8 782 aa16.89■□□□□ 0.29
XRCC1-201ENST00000262887 TARSL2A2RTX5 802 aaKnown RBP16.88■□□□□ 0.29
XRCC1-201ENST00000262887 N4BP3O15049 544 aa16.88■□□□□ 0.29
XRCC1-201ENST00000262887 KIF1CO43896 1103 aaKnown RBP16.88■□□□□ 0.29
XRCC1-201ENST00000262887 CDC25AP30304 524 aa16.88■□□□□ 0.29
XRCC1-201ENST00000262887 NR5A1Q13285 461 aa16.88■□□□□ 0.29
XRCC1-201ENST00000262887 CAMTA1Q9Y6Y1 1673 aa16.88■□□□□ 0.29
XRCC1-201ENST00000262887 WDR17Q8IZU2 1322 aa16.88■□□□□ 0.29
XRCC1-201ENST00000262887 ENC1O14682 589 aa16.88■□□□□ 0.29
XRCC1-201ENST00000262887 IRAK1P51617 712 aa16.88■□□□□ 0.29
XRCC1-201ENST00000262887 CCDC57Q2TAC2 916 aa16.88■□□□□ 0.29
XRCC1-201ENST00000262887 NBPF14Q5TI25 921 aa16.88■□□□□ 0.29
XRCC1-201ENST00000262887 TRIM22Q8IYM9 498 aa16.88■□□□□ 0.29
XRCC1-201ENST00000262887 GDAP1L1Q96MZ0 367 aa16.88■□□□□ 0.29
XRCC1-201ENST00000262887 MMS19Q96T76 1030 aa16.88■□□□□ 0.29
XRCC1-201ENST00000262887 SCN11AQ9UI33 1791 aa16.88■□□□□ 0.29
XRCC1-201ENST00000262887 GOLGA6CA6NDK9 693 aa16.88■□□□□ 0.29
XRCC1-201ENST00000262887 GOLGA6DP0CG33 693 aa16.88■□□□□ 0.29
XRCC1-201ENST00000262887 IFNAR1P17181 557 aa16.88■□□□□ 0.29
XRCC1-201ENST00000262887 THEMISQ8N1K5 641 aaPredicted RBP16.88■□□□□ 0.29
XRCC1-201ENST00000262887 GOLGA6AQ9NYA3 693 aa16.88■□□□□ 0.29
XRCC1-201ENST00000262887 MNAT1P51948 309 aa16.87■□□□□ 0.29
XRCC1-201ENST00000262887 STRN4Q9NRL3 753 aa16.87■□□□□ 0.29
XRCC1-201ENST00000262887 HDAC6Q9UBN7 1215 aa16.87■□□□□ 0.29
XRCC1-201ENST00000262887 TRIM10Q9UDY6 481 aa16.87■□□□□ 0.29
XRCC1-201ENST00000262887 CTNND2Q9UQB3 1225 aa16.87■□□□□ 0.29
XRCC1-201ENST00000262887 AGPSO00116 658 aa16.87■□□□□ 0.29
XRCC1-201ENST00000262887 PSMD14O00487 310 aa16.87■□□□□ 0.29
XRCC1-201ENST00000262887 IFIT3O14879 490 aaKnown RBP16.87■□□□□ 0.29
XRCC1-201ENST00000262887 HNRNPH1P31943 449 aaKnown RBP16.87■□□□□ 0.29
XRCC1-201ENST00000262887 KRT9P35527 623 aa16.87■□□□□ 0.29
XRCC1-201ENST00000262887 USP8P40818 1118 aa16.87■□□□□ 0.29
XRCC1-201ENST00000262887 KRT31Q15323 416 aa16.87■□□□□ 0.29
XRCC1-201ENST00000262887 TTLL7Q6ZT98 887 aa16.87■□□□□ 0.29
XRCC1-201ENST00000262887 CCDC82Q8N4S0 544 aa16.87■□□□□ 0.29
XRCC1-201ENST00000262887 VPS16Q9H269 839 aa16.87■□□□□ 0.29
XRCC1-201ENST00000262887 SUFUQ9UMX1 484 aa16.87■□□□□ 0.29
XRCC1-201ENST00000262887 SAR1BQ9Y6B6 198 aa16.87■□□□□ 0.29
XRCC1-201ENST00000262887 A0A087X0B3 334 aa16.86■□□□□ 0.29
XRCC1-201ENST00000262887 PPP1R3GB7ZBB8 358 aa16.86■□□□□ 0.29
XRCC1-201ENST00000262887 RNF225M0QZC1 329 aaPredicted RBP16.86■□□□□ 0.29
XRCC1-201ENST00000262887 TATP17735 454 aaPredicted RBP16.86■□□□□ 0.29
XRCC1-201ENST00000262887 ADD2P35612 726 aa16.86■□□□□ 0.29
XRCC1-201ENST00000262887 SATB1Q01826 763 aa16.86■□□□□ 0.29
XRCC1-201ENST00000262887 TRIM14Q14142 442 aa16.86■□□□□ 0.29
XRCC1-201ENST00000262887 IFNL2Q8IZJ0 200 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms